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FFCP PHASE1:Mm9::chr11:41995809..41995835,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14394
|EntrezGene=14394
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=125bp_to_ENSMUST00000169305_5end
|association_with_transcript=125bp_to_ENSMUST00000169305_5end
|cluster_id=chr11:41995809..41995835,-
|description=CAGE_peak_3_at_Gabra1_5end
|description=CAGE_peak_3_at_Gabra1_5end
|id=chr11:41995809..41995835,-
|id=chr11:41995809..41995835,-
|ontology_enrichment_celltype=CL:0000117!8.12e-09!23;CL:0000337!8.12e-09!23
|ontology_enrichment_celltype=CL:0000117!8.12e-09!23;CL:0000337!8.12e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-14,23;CL:0000337,2.17e-14,23;CL:0000540,5.87e-09,33;CL:0000047,5.87e-09,33;CL:0000031,5.87e-09,33;CL:0000404,5.87e-09,33;CL:0002610,2.13e-07,3;CL:0000393,4.59e-07,39;CL:0000211,4.59e-07,39;CL:0000221,8.03e-07,44;CL:0000133,8.03e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.13e-20!71;UBERON:0003075!3.13e-20!71;UBERON:0007284!3.13e-20!71;UBERON:0000033!4.05e-18!63;UBERON:0001049!6.97e-18!52;UBERON:0005068!6.97e-18!52;UBERON:0006241!6.97e-18!52;UBERON:0007135!6.97e-18!52;UBERON:0004121!1.09e-17!102;UBERON:0000924!1.09e-17!102;UBERON:0006601!1.09e-17!102;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0001017!1.91e-17!73;UBERON:0005743!1.91e-17!73;UBERON:0000955!3.19e-17!50;UBERON:0006238!3.19e-17!50;UBERON:0002616!1.67e-16!49;UBERON:0003056!9.87e-15!49;UBERON:0002020!4.72e-14!34;UBERON:0003080!1.14e-12!40;UBERON:0002780!6.67e-12!39;UBERON:0001890!6.67e-12!39;UBERON:0006240!6.67e-12!39;UBERON:0002791!4.65e-11!29;UBERON:0003528!4.65e-11!29;UBERON:0001893!4.65e-11!29;UBERON:0002021!3.16e-09!10;UBERON:0000411!3.16e-09!10;UBERON:0001950!3.16e-09!10;UBERON:0007811!9.97e-09!86;UBERON:0002619!8.55e-08!17;UBERON:0000153!1.96e-07!94
|ontology_enrichment_uberon=UBERON:0002346!3.13e-20!71;UBERON:0003075!3.13e-20!71;UBERON:0007284!3.13e-20!71;UBERON:0000033!4.05e-18!63;UBERON:0001049!6.97e-18!52;UBERON:0005068!6.97e-18!52;UBERON:0006241!6.97e-18!52;UBERON:0007135!6.97e-18!52;UBERON:0004121!1.09e-17!102;UBERON:0000924!1.09e-17!102;UBERON:0006601!1.09e-17!102;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0001017!1.91e-17!73;UBERON:0005743!1.91e-17!73;UBERON:0000955!3.19e-17!50;UBERON:0006238!3.19e-17!50;UBERON:0002616!1.67e-16!49;UBERON:0003056!9.87e-15!49;UBERON:0002020!4.72e-14!34;UBERON:0003080!1.14e-12!40;UBERON:0002780!6.67e-12!39;UBERON:0001890!6.67e-12!39;UBERON:0006240!6.67e-12!39;UBERON:0002791!4.65e-11!29;UBERON:0003528!4.65e-11!29;UBERON:0001893!4.65e-11!29;UBERON:0002021!3.16e-09!10;UBERON:0000411!3.16e-09!10;UBERON:0001950!3.16e-09!10;UBERON:0007811!9.97e-09!86;UBERON:0002619!8.55e-08!17;UBERON:0000153!1.96e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.45e-37,54;UBERON:0001049,1.12e-33,52;UBERON:0005068,1.12e-33,52;UBERON:0006241,1.12e-33,52;UBERON:0007135,1.12e-33,52;UBERON:0001017,9.80e-33,73;UBERON:0001016,1.31e-31,75;UBERON:0002346,1.74e-29,64;UBERON:0003075,1.74e-29,64;UBERON:0007284,1.74e-29,64;UBERON:0002020,2.59e-29,34;UBERON:0004121,1.70e-27,95;UBERON:0000924,1.70e-27,95;UBERON:0006601,1.70e-27,95;UBERON:0000955,4.72e-27,47;UBERON:0006238,4.72e-27,47;UBERON:0010371,2.08e-26,73;UBERON:0002616,1.48e-25,46;UBERON:0003528,1.85e-22,29;UBERON:0002791,1.85e-22,29;UBERON:0001893,1.85e-22,29;UBERON:0003080,5.51e-21,40;UBERON:0002780,2.21e-19,39;UBERON:0001890,2.21e-19,39;UBERON:0006240,2.21e-19,39;UBERON:0003056,2.95e-19,49;UBERON:0002021,3.35e-19,10;UBERON:0000411,3.35e-19,10;UBERON:0001950,3.35e-19,10;UBERON:0010314,4.23e-19,92;UBERON:0002619,6.27e-15,17;UBERON:0000956,8.45e-14,21;UBERON:0001869,8.45e-14,21;UBERON:0000203,8.45e-14,21;UBERON:0003076,1.35e-13,12;UBERON:0003057,1.35e-13,12;UBERON:0000025,8.30e-11,114;UBERON:0004111,2.15e-10,122;UBERON:0002420,3.35e-10,8;UBERON:0007245,3.35e-10,8;UBERON:0010009,3.35e-10,8;UBERON:0010011,3.35e-10,8;UBERON:0000454,3.35e-10,8;UBERON:0002240,8.02e-10,6;UBERON:0005174,8.02e-10,6;UBERON:0001137,8.02e-10,6;UBERON:0002950,2.24e-08,4;UBERON:0001891,2.24e-08,4;UBERON:0009616,2.24e-08,4;UBERON:0010286,2.24e-08,4;UBERON:0001948,2.45e-08,5;UBERON:0002315,2.45e-08,5;UBERON:0004684,2.13e-07,3;UBERON:0002275,2.13e-07,3;UBERON:0011216,4.70e-07,194
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.28520787523043,1.76694832761291,0.367472397644862,0.287536413054709,0,49.5521464497249,42.9029455966231,49.1540906419979,1.45074916503213,0.731901148819277,1.04182674111352,22.6138229191119,19.1339287410771,24.2949213965128,3.53554302568401,1.99320353118744,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0,0,0.91347103775248,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.144599356919912,0,0,0,0,0,55.3355706351824,41.0515545354372,0,0,0,0,65.7580906987172,22.4175295381127,3.01570445070875,46.2372691711455,39.1244649715406,50.2847067834135,33.0972176658226,0.712875546952214,0,0,2.31486041475121,0.390361328888111,0,0.180062129805349,0.30140963567143,0.612328492361951,0.2562274405697,0.374806898238915,3.3631438196072,0,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,33.015521924568,2.57261530948211,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,12.8440471990234,16.7612711826851,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,27.6336332122754,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.709360934569094,0.356737635204141,0.329098041204242,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,4.82105785227325,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0.216010681643603,0.836353184057875,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.774958940866387,1.18269287843545,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,29.3670958160875,29.0004898999521,24.6345070778941,28.5276282690521,39.0497036269266,49.8559972277202,37.8012600129811,27.0192721934532,30.3605414019417,35.2077011991238,0,0,0.853668028770671,0.243106717068294,0,0.367687016900028,0.888986911206461,0.618105171716683,0,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.640251524048693,0.918967503289812,0.476293691283074,0.231768651889711,0.38581844092741,0,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,0.593175090620871,0.689531376628944,1.22769312950907,0.619747364743864,0.964533054905707,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,0,0
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,2.28520787523043,1.76694832761291,0.367472397644862,0.287536413054709,0,49.5521464497249,42.9029455966231,49.1540906419979,1.45074916503213,0.731901148819277,1.04182674111352,22.6138229191119,19.1339287410771,24.2949213965128,3.53554302568401,1.99320353118744,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0,0,0.91347103775248,0,0,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.144599356919912,0,0,0,0,0,55.3355706351824,41.0515545354372,0,0,0,0,65.7580906987172,22.4175295381127,3.01570445070875,46.2372691711455,39.1244649715406,50.2847067834135,33.0972176658226,0.712875546952214,0,0,2.31486041475121,0.390361328888111,0,0.180062129805349,0.30140963567143,0.612328492361951,0.2562274405697,0.374806898238915,3.3631438196072,0,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,33.015521924568,2.57261530948211,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,12.8440471990234,16.7612711826851,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,27.6336332122754,0.141940085208269,0.534196811001766,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.709360934569094,0.356737635204141,0.329098041204242,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,4.82105785227325,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0.216010681643603,0.836353184057875,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.774958940866387,1.18269287843545,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,29.3670958160875,29.0004898999521,24.6345070778941,28.5276282690521,39.0497036269266,49.8559972277202,37.8012600129811,27.0192721934532,30.3605414019417,35.2077011991238,0,0,0.853668028770671,0.243106717068294,0,0.367687016900028,0.888986911206461,0.618105171716683,0,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.640251524048693,0.918967503289812,0.476293691283074,0.231768651889711,0.38581844092741,0,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,0.593175090620871,0.689531376628944,1.22769312950907,0.619747364743864,0.964533054905707,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,0,0
|short_description=p3@Gabra1
|short_description=p3@Gabra1
}}
}}

Latest revision as of 12:25, 1 October 2015

Short description:p3@Gabra1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gabra1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 125bp_to_ENSMUST00000169305_5end
EntrezGene:Gabra1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gabra1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D349.55
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D749.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B255.34
cerebellum, neonate N30.CNhs11135.1395-42I241.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A465.76
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D546.24
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F250.28
diencephalon, neonate N30.CNhs11201.1388-42B233.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E833.02
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.84
medulla oblongata, neonate N30.CNhs11200.1396-42A316.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I927.63
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.21
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.45e-3754
neural tube1.12e-3352
neural rod1.12e-3352
future spinal cord1.12e-3352
neural keel1.12e-3352
central nervous system9.80e-3373
nervous system1.31e-3175
neurectoderm1.74e-2964
neural plate1.74e-2964
presumptive neural plate1.74e-2964
gray matter2.59e-2934
ectoderm-derived structure1.70e-2795
ectoderm1.70e-2795
presumptive ectoderm1.70e-2795
brain4.72e-2747
future brain4.72e-2747
ecto-epithelium2.08e-2673
regional part of brain1.48e-2546
brain grey matter1.85e-2229
regional part of telencephalon1.85e-2229
telencephalon1.85e-2229
anterior neural tube5.51e-2140
regional part of forebrain2.21e-1939
forebrain2.21e-1939
future forebrain2.21e-1939
pre-chordal neural plate2.95e-1949
occipital lobe3.35e-1910
visual cortex3.35e-1910
neocortex3.35e-1910
structure with developmental contribution from neural crest4.23e-1992
regional part of cerebral cortex6.27e-1517
cerebral cortex8.45e-1421
cerebral hemisphere8.45e-1421
pallium8.45e-1421
posterior neural tube1.35e-1312
chordal neural plate1.35e-1312
tube8.30e-11114
anatomical conduit2.15e-10122
basal ganglion3.35e-108
nuclear complex of neuraxis3.35e-108
aggregate regional part of brain3.35e-108
collection of basal ganglia3.35e-108
cerebral subcortex3.35e-108
spinal cord8.02e-106
dorsal region element8.02e-106
dorsum8.02e-106
regional part of midbrain2.24e-084
midbrain2.24e-084
presumptive midbrain2.24e-084
midbrain neural tube2.24e-084
regional part of spinal cord2.45e-085
gray matter of spinal cord2.45e-085
raphe nuclei2.13e-073
reticular formation2.13e-073
organ system subdivision4.70e-07194
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