FFCP PHASE1:Mm9::chrX:133527862..133527869,+: Difference between revisions
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{{FFCP|EntrezGene=66995|HGNC=|MCL_coexpression_id=1|UniProt=Q8VD24|association_with_transcript=25bp_to_ENSMUST00000033804_5end|description=CAGE_peak_5_at_Zcchc18_5end|id=chrX:133527862..133527869,+|ontology_enrichment_celltype=CL:0000117!4.60e-15!23;CL:0000337!4.60e-15!23;CL:0000540!1.37e-12!33;CL:0000047!1.37e-12!33;CL:0000031!1.37e-12!33;CL:0000404!1.37e-12!33;CL:0000221!1.03e-11!44;CL:0000133!1.03e-11!44;CL:0002319!1.56e-11!43;CL:0000393!3.27e-09!39;CL:0000211!3.27e-09!39;CL:0000055!1.83e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.85e-20,23;CL:0000337,7.85e-20,23;CL:0000540,1.31e-12,33;CL:0000047,1.31e-12,33;CL:0000031,1.31e-12,33;CL:0000404,1.31e-12,33;CL:0000393,4.51e-10,39;CL:0000211,4.51e-10,39;CL:0002319,4.91e-10,43;CL:0000221,1.03e-09,44;CL:0000133,1.03e-09,44;CL:0002613,2.27e-07,3;CL:0002610,2.63e-07,3;CL:0002612,6.19e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.93e-34!73;UBERON:0005743!2.93e-34!73;UBERON:0000073!1.21e-33!75;UBERON:0001016!1.21e-33!75;UBERON:0001049!1.23e-30!52;UBERON:0005068!1.23e-30!52;UBERON:0006241!1.23e-30!52;UBERON:0007135!1.23e-30!52;UBERON:0002346!8.03e-30!71;UBERON:0003075!8.03e-30!71;UBERON:0007284!8.03e-30!71;UBERON:0004121!2.63e-29!102;UBERON:0000924!2.63e-29!102;UBERON:0006601!2.63e-29!102;UBERON:0000955!5.30e-29!50;UBERON:0006238!5.30e-29!50;UBERON:0000033!2.96e-28!63;UBERON:0002616!5.22e-28!49;UBERON:0003056!1.73e-23!49;UBERON:0003080!4.13e-23!40;UBERON:0002780!3.16e-22!39;UBERON:0001890!3.16e-22!39;UBERON:0006240!3.16e-22!39;UBERON:0002020!5.70e-20!34;UBERON:0002791!1.01e-15!29;UBERON:0003528!1.01e-15!29;UBERON:0001893!1.01e-15!29;UBERON:0007811!2.32e-15!86;UBERON:0000153!2.47e-15!94;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0002619!2.57e-08!17;UBERON:0003076!7.33e-08!12;UBERON:0003057!7.33e-08!12;UBERON:0002420!9.95e-08!8;UBERON:0007245!9.95e-08!8;UBERON:0010009!9.95e-08!8;UBERON:0010011!9.95e-08!8;UBERON:0000454!9.95e-08!8;UBERON:0001894!1.84e-07!10;UBERON:0006222!1.84e-07!10;UBERON:0002021!8.47e-07!10;UBERON:0000411!8.47e-07!10;UBERON:0001950!8.47e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.65e-40,54;UBERON:0001017,5.83e-38,73;UBERON:0001016,1.03e-36,75;UBERON:0001049,2.32e-36,52;UBERON:0005068,2.32e-36,52;UBERON:0006241,2.32e-36,52;UBERON:0007135,2.32e-36,52;UBERON:0000955,3.76e-28,47;UBERON:0006238,3.76e-28,47;UBERON:0002346,4.78e-28,64;UBERON:0003075,4.78e-28,64;UBERON:0007284,4.78e-28,64;UBERON:0002020,2.81e-27,34;UBERON:0004121,4.04e-27,95;UBERON:0000924,4.04e-27,95;UBERON:0006601,4.04e-27,95;UBERON:0002616,1.93e-26,46;UBERON:0003080,2.53e-24,40;UBERON:0010371,1.32e-23,73;UBERON:0002780,9.51e-23,39;UBERON:0001890,9.51e-23,39;UBERON:0006240,9.51e-23,39;UBERON:0003528,4.63e-19,29;UBERON:0002791,4.63e-19,29;UBERON:0001893,4.63e-19,29;UBERON:0003056,9.96e-19,49;UBERON:0010314,4.35e-17,92;UBERON:0003076,2.31e-12,12;UBERON:0003057,2.31e-12,12;UBERON:0002240,2.46e-12,6;UBERON:0005174,2.46e-12,6;UBERON:0001137,2.46e-12,6;UBERON:0002420,2.72e-12,8;UBERON:0007245,2.72e-12,8;UBERON:0010009,2.72e-12,8;UBERON:0010011,2.72e-12,8;UBERON:0000454,2.72e-12,8;UBERON:0000025,2.88e-12,114;UBERON:0000369,2.64e-11,5;UBERON:0002435,2.64e-11,5;UBERON:0000204,2.64e-11,5;UBERON:0010082,2.64e-11,5;UBERON:0004111,5.98e-11,122;UBERON:0001948,1.15e-10,5;UBERON:0002315,1.15e-10,5;UBERON:0002619,4.23e-10,17;UBERON:0000956,1.36e-09,21;UBERON:0001869,1.36e-09,21;UBERON:0000203,1.36e-09,21;UBERON:0002021,5.16e-09,10;UBERON:0000411,5.16e-09,10;UBERON:0001950,5.16e-09,10;UBERON:0011216,1.10e-08,194;UBERON:0004684,2.63e-07,3;UBERON:0002275,2.63e-07,3;UBERON:0002257,6.19e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0.889294796111139,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,2.57085885963423,2.42955395046775,0.489963196859816,0.670918297127655,0,5.50579404996943,3.19218345212969,1.22885226604995,1.97829431595291,3.65950574409639,2.6045668527838,1.11673199600552,0.56276261003168,1.5279824777681,2.65165726926301,3.13217697758026,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.705532242814229,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,2.39665023047716,2.74500361691176,2.89005009859588,2.43354048269187,2.04572365864264,6.64921742590592,3.56930778749067,0,0,0,0,0.780722657776222,0,0.900310649026746,0.150704817835715,0.544291993210623,0.768682321709099,0.374806898238915,0,0.862271971731369,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.9551876352064,0,0,0,0.696710015581316,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.40654023910644,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0.790575555893047,2.89189184779626,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,1.4229455216103,1.07168517515796,0.177340233642274,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.920650473014354,1.14579102687879,1.20297227640581,0,3.0215755895588,2.02506750069542,1.35096360967266,1.35942722695261,0.51776031175182,0.31136204275253,1.59609949360412,0.170733605754134,0.729320151204882,0,0.183843508450014,1.55572709461131,0.206035057238894,0.320919209591815,0,0,1.13175804831646,0.280924522409647,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,1.71434626192708,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0,0,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0|short_description=p5@Zcchc18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66995 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VD24 | |||
|association_with_transcript=25bp_to_ENSMUST00000033804_5end | |||
|cluster_id=chrX:133527862..133527869,+ | |||
|description=CAGE_peak_5_at_Zcchc18_5end | |||
|id=chrX:133527862..133527869,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.60e-15!23;CL:0000337!4.60e-15!23;CL:0000540!1.37e-12!33;CL:0000047!1.37e-12!33;CL:0000031!1.37e-12!33;CL:0000404!1.37e-12!33;CL:0000221!1.03e-11!44;CL:0000133!1.03e-11!44;CL:0002319!1.56e-11!43;CL:0000393!3.27e-09!39;CL:0000211!3.27e-09!39;CL:0000055!1.83e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.85e-20,23;CL:0000337,7.85e-20,23;CL:0000540,1.31e-12,33;CL:0000047,1.31e-12,33;CL:0000031,1.31e-12,33;CL:0000404,1.31e-12,33;CL:0000393,4.51e-10,39;CL:0000211,4.51e-10,39;CL:0002319,4.91e-10,43;CL:0000221,1.03e-09,44;CL:0000133,1.03e-09,44;CL:0002613,2.27e-07,3;CL:0002610,2.63e-07,3;CL:0002612,6.19e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.93e-34!73;UBERON:0005743!2.93e-34!73;UBERON:0000073!1.21e-33!75;UBERON:0001016!1.21e-33!75;UBERON:0001049!1.23e-30!52;UBERON:0005068!1.23e-30!52;UBERON:0006241!1.23e-30!52;UBERON:0007135!1.23e-30!52;UBERON:0002346!8.03e-30!71;UBERON:0003075!8.03e-30!71;UBERON:0007284!8.03e-30!71;UBERON:0004121!2.63e-29!102;UBERON:0000924!2.63e-29!102;UBERON:0006601!2.63e-29!102;UBERON:0000955!5.30e-29!50;UBERON:0006238!5.30e-29!50;UBERON:0000033!2.96e-28!63;UBERON:0002616!5.22e-28!49;UBERON:0003056!1.73e-23!49;UBERON:0003080!4.13e-23!40;UBERON:0002780!3.16e-22!39;UBERON:0001890!3.16e-22!39;UBERON:0006240!3.16e-22!39;UBERON:0002020!5.70e-20!34;UBERON:0002791!1.01e-15!29;UBERON:0003528!1.01e-15!29;UBERON:0001893!1.01e-15!29;UBERON:0007811!2.32e-15!86;UBERON:0000153!2.47e-15!94;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0002619!2.57e-08!17;UBERON:0003076!7.33e-08!12;UBERON:0003057!7.33e-08!12;UBERON:0002420!9.95e-08!8;UBERON:0007245!9.95e-08!8;UBERON:0010009!9.95e-08!8;UBERON:0010011!9.95e-08!8;UBERON:0000454!9.95e-08!8;UBERON:0001894!1.84e-07!10;UBERON:0006222!1.84e-07!10;UBERON:0002021!8.47e-07!10;UBERON:0000411!8.47e-07!10;UBERON:0001950!8.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.65e-40,54;UBERON:0001017,5.83e-38,73;UBERON:0001016,1.03e-36,75;UBERON:0001049,2.32e-36,52;UBERON:0005068,2.32e-36,52;UBERON:0006241,2.32e-36,52;UBERON:0007135,2.32e-36,52;UBERON:0000955,3.76e-28,47;UBERON:0006238,3.76e-28,47;UBERON:0002346,4.78e-28,64;UBERON:0003075,4.78e-28,64;UBERON:0007284,4.78e-28,64;UBERON:0002020,2.81e-27,34;UBERON:0004121,4.04e-27,95;UBERON:0000924,4.04e-27,95;UBERON:0006601,4.04e-27,95;UBERON:0002616,1.93e-26,46;UBERON:0003080,2.53e-24,40;UBERON:0010371,1.32e-23,73;UBERON:0002780,9.51e-23,39;UBERON:0001890,9.51e-23,39;UBERON:0006240,9.51e-23,39;UBERON:0003528,4.63e-19,29;UBERON:0002791,4.63e-19,29;UBERON:0001893,4.63e-19,29;UBERON:0003056,9.96e-19,49;UBERON:0010314,4.35e-17,92;UBERON:0003076,2.31e-12,12;UBERON:0003057,2.31e-12,12;UBERON:0002240,2.46e-12,6;UBERON:0005174,2.46e-12,6;UBERON:0001137,2.46e-12,6;UBERON:0002420,2.72e-12,8;UBERON:0007245,2.72e-12,8;UBERON:0010009,2.72e-12,8;UBERON:0010011,2.72e-12,8;UBERON:0000454,2.72e-12,8;UBERON:0000025,2.88e-12,114;UBERON:0000369,2.64e-11,5;UBERON:0002435,2.64e-11,5;UBERON:0000204,2.64e-11,5;UBERON:0010082,2.64e-11,5;UBERON:0004111,5.98e-11,122;UBERON:0001948,1.15e-10,5;UBERON:0002315,1.15e-10,5;UBERON:0002619,4.23e-10,17;UBERON:0000956,1.36e-09,21;UBERON:0001869,1.36e-09,21;UBERON:0000203,1.36e-09,21;UBERON:0002021,5.16e-09,10;UBERON:0000411,5.16e-09,10;UBERON:0001950,5.16e-09,10;UBERON:0011216,1.10e-08,194;UBERON:0004684,2.63e-07,3;UBERON:0002275,2.63e-07,3;UBERON:0002257,6.19e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0.889294796111139,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0.210324961351382,2.57085885963423,2.42955395046775,0.489963196859816,0.670918297127655,0,5.50579404996943,3.19218345212969,1.22885226604995,1.97829431595291,3.65950574409639,2.6045668527838,1.11673199600552,0.56276261003168,1.5279824777681,2.65165726926301,3.13217697758026,1.1183966749518,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.705532242814229,0,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,2.39665023047716,2.74500361691176,2.89005009859588,2.43354048269187,2.04572365864264,6.64921742590592,3.56930778749067,0,0,0,0,0.780722657776222,0,0.900310649026746,0.150704817835715,0.544291993210623,0.768682321709099,0.374806898238915,0,0.862271971731369,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.9551876352064,0,0,0,0.696710015581316,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.40654023910644,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0.790575555893047,2.89189184779626,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,1.4229455216103,1.07168517515796,0.177340233642274,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.920650473014354,1.14579102687879,1.20297227640581,0,3.0215755895588,2.02506750069542,1.35096360967266,1.35942722695261,0.51776031175182,0.31136204275253,1.59609949360412,0.170733605754134,0.729320151204882,0,0.183843508450014,1.55572709461131,0.206035057238894,0.320919209591815,0,0,1.13175804831646,0.280924522409647,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,1.71434626192708,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0,0,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p5@Zcchc18 | |||
}} |
Latest revision as of 15:04, 1 October 2015
Short description: | p5@Zcchc18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zcchc18_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 25bp_to_ENSMUST00000033804_5end |
EntrezGene: | Zcchc18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.85e-20 | 23 |
neuroblast (sensu Vertebrata) | 7.85e-20 | 23 |
neuron | 1.31e-12 | 33 |
neuronal stem cell | 1.31e-12 | 33 |
neuroblast | 1.31e-12 | 33 |
electrically signaling cell | 1.31e-12 | 33 |
electrically responsive cell | 4.51e-10 | 39 |
electrically active cell | 4.51e-10 | 39 |
neural cell | 4.91e-10 | 43 |
ectodermal cell | 1.03e-09 | 44 |
neurectodermal cell | 1.03e-09 | 44 |
striatum neuron | 2.27e-07 | 3 |
raphe nuclei neuron | 2.63e-07 | 3 |
neuron of the ventral spinal cord | 6.19e-07 | 3 |