FFCP PHASE1:Mm9::chrX:57401013..57401047,-: Difference between revisions
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{{FFCP|EntrezGene=109904|HGNC=|MCL_coexpression_id=20|UniProt=Q8C067|association_with_transcript=-136bp_to_ENSMUST00000101531_5end|description=CAGE_peak_1_at_Mcf2_5end|id=chrX:57401013..57401047,-|ontology_enrichment_celltype=CL:0000117!3.25e-09!23;CL:0000337!3.25e-09!23|ontology_enrichment_celltype_v019_2=CL:0002610,2.85e-11,3;CL:0002614,4.51e-10,3;CL:0000117,6.60e-08,23;CL:0000337,6.60e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.16e-23!52;UBERON:0005068!2.16e-23!52;UBERON:0006241!2.16e-23!52;UBERON:0007135!2.16e-23!52;UBERON:0000955!5.47e-22!50;UBERON:0006238!5.47e-22!50;UBERON:0002616!2.79e-21!49;UBERON:0000033!7.56e-21!63;UBERON:0002020!1.72e-20!34;UBERON:0002346!5.75e-20!71;UBERON:0003075!5.75e-20!71;UBERON:0007284!5.75e-20!71;UBERON:0001017!1.29e-18!73;UBERON:0005743!1.29e-18!73;UBERON:0000073!1.02e-17!75;UBERON:0001016!1.02e-17!75;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0003056!4.79e-16!49;UBERON:0003080!7.90e-16!40;UBERON:0002780!7.46e-15!39;UBERON:0001890!7.46e-15!39;UBERON:0006240!7.46e-15!39;UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0007811!3.62e-12!86;UBERON:0000956!3.33e-11!21;UBERON:0001869!3.33e-11!21;UBERON:0000203!3.33e-11!21;UBERON:0002021!5.26e-11!10;UBERON:0000411!5.26e-11!10;UBERON:0001950!5.26e-11!10;UBERON:0002619!2.13e-10!17;UBERON:0000153!5.25e-10!94;UBERON:0003076!2.20e-08!12;UBERON:0003057!2.20e-08!12;UBERON:0002298!5.62e-08!6;UBERON:0002240!9.76e-07!6;UBERON:0005174!9.76e-07!6;UBERON:0001137!9.76e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-33,54;UBERON:0001049,1.52e-28,52;UBERON:0005068,1.52e-28,52;UBERON:0006241,1.52e-28,52;UBERON:0007135,1.52e-28,52;UBERON:0001017,9.55e-26,73;UBERON:0001016,6.16e-25,75;UBERON:0002616,3.82e-24,46;UBERON:0000955,1.51e-23,47;UBERON:0006238,1.51e-23,47;UBERON:0002020,4.67e-23,34;UBERON:0002346,2.24e-22,64;UBERON:0003075,2.24e-22,64;UBERON:0007284,2.24e-22,64;UBERON:0003080,3.39e-22,40;UBERON:0003528,2.72e-21,29;UBERON:0002791,2.72e-21,29;UBERON:0001893,2.72e-21,29;UBERON:0002780,4.85e-20,39;UBERON:0001890,4.85e-20,39;UBERON:0006240,4.85e-20,39;UBERON:0010371,4.48e-19,73;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0003056,1.86e-17,49;UBERON:0010314,3.21e-14,92;UBERON:0002619,2.71e-13,17;UBERON:0002950,3.06e-13,4;UBERON:0001891,3.06e-13,4;UBERON:0009616,3.06e-13,4;UBERON:0010286,3.06e-13,4;UBERON:0000956,4.64e-13,21;UBERON:0001869,4.64e-13,21;UBERON:0000203,4.64e-13,21;UBERON:0004684,2.85e-11,3;UBERON:0002275,2.85e-11,3;UBERON:0000025,1.31e-10,114;UBERON:0002038,4.51e-10,3;UBERON:0009663,4.51e-10,3;UBERON:0009661,4.51e-10,3;UBERON:0000125,4.51e-10,3;UBERON:0002308,4.51e-10,3;UBERON:0002420,8.52e-10,8;UBERON:0007245,8.52e-10,8;UBERON:0010009,8.52e-10,8;UBERON:0010011,8.52e-10,8;UBERON:0000454,8.52e-10,8;UBERON:0004111,1.28e-09,122;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0003076,8.21e-07,12;UBERON:0003057,8.21e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.367472397644862,0.0958454710182364,0,11.0115880999389,7.40586560894089,7.68032666281217,0.131886287730194,0,0.52091337055676,1.95428099300967,1.68828783009504,3.66715794664344,1.76777151284201,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,7.48953197024113,5.03250663100489,1.63350657746724,2.78118912307642,4.09144731728529,6.64921742590592,4.38051410282946,0,0.248813941220186,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,12.0412942490844,10.0802050469295,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0526446306831,0.341741761595705,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,1.12950368523413,0.920650473014354,2.29158205375759,1.20297227640581,3.42541259885321,3.7769694869485,1.35004500046361,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0,0.73171189149109,0.789209134313529,0.407412341537585,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p1@Mcf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109904 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C067 | |||
|association_with_transcript=-136bp_to_ENSMUST00000101531_5end | |||
|cluster_id=chrX:57401013..57401047,- | |||
|description=CAGE_peak_1_at_Mcf2_5end | |||
|id=chrX:57401013..57401047,- | |||
|ontology_enrichment_celltype=CL:0000117!3.25e-09!23;CL:0000337!3.25e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.85e-11,3;CL:0002614,4.51e-10,3;CL:0000117,6.60e-08,23;CL:0000337,6.60e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.16e-23!52;UBERON:0005068!2.16e-23!52;UBERON:0006241!2.16e-23!52;UBERON:0007135!2.16e-23!52;UBERON:0000955!5.47e-22!50;UBERON:0006238!5.47e-22!50;UBERON:0002616!2.79e-21!49;UBERON:0000033!7.56e-21!63;UBERON:0002020!1.72e-20!34;UBERON:0002346!5.75e-20!71;UBERON:0003075!5.75e-20!71;UBERON:0007284!5.75e-20!71;UBERON:0001017!1.29e-18!73;UBERON:0005743!1.29e-18!73;UBERON:0000073!1.02e-17!75;UBERON:0001016!1.02e-17!75;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0003056!4.79e-16!49;UBERON:0003080!7.90e-16!40;UBERON:0002780!7.46e-15!39;UBERON:0001890!7.46e-15!39;UBERON:0006240!7.46e-15!39;UBERON:0004121!1.35e-14!102;UBERON:0000924!1.35e-14!102;UBERON:0006601!1.35e-14!102;UBERON:0007811!3.62e-12!86;UBERON:0000956!3.33e-11!21;UBERON:0001869!3.33e-11!21;UBERON:0000203!3.33e-11!21;UBERON:0002021!5.26e-11!10;UBERON:0000411!5.26e-11!10;UBERON:0001950!5.26e-11!10;UBERON:0002619!2.13e-10!17;UBERON:0000153!5.25e-10!94;UBERON:0003076!2.20e-08!12;UBERON:0003057!2.20e-08!12;UBERON:0002298!5.62e-08!6;UBERON:0002240!9.76e-07!6;UBERON:0005174!9.76e-07!6;UBERON:0001137!9.76e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-33,54;UBERON:0001049,1.52e-28,52;UBERON:0005068,1.52e-28,52;UBERON:0006241,1.52e-28,52;UBERON:0007135,1.52e-28,52;UBERON:0001017,9.55e-26,73;UBERON:0001016,6.16e-25,75;UBERON:0002616,3.82e-24,46;UBERON:0000955,1.51e-23,47;UBERON:0006238,1.51e-23,47;UBERON:0002020,4.67e-23,34;UBERON:0002346,2.24e-22,64;UBERON:0003075,2.24e-22,64;UBERON:0007284,2.24e-22,64;UBERON:0003080,3.39e-22,40;UBERON:0003528,2.72e-21,29;UBERON:0002791,2.72e-21,29;UBERON:0001893,2.72e-21,29;UBERON:0002780,4.85e-20,39;UBERON:0001890,4.85e-20,39;UBERON:0006240,4.85e-20,39;UBERON:0010371,4.48e-19,73;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0002021,1.23e-18,10;UBERON:0000411,1.23e-18,10;UBERON:0001950,1.23e-18,10;UBERON:0003056,1.86e-17,49;UBERON:0010314,3.21e-14,92;UBERON:0002619,2.71e-13,17;UBERON:0002950,3.06e-13,4;UBERON:0001891,3.06e-13,4;UBERON:0009616,3.06e-13,4;UBERON:0010286,3.06e-13,4;UBERON:0000956,4.64e-13,21;UBERON:0001869,4.64e-13,21;UBERON:0000203,4.64e-13,21;UBERON:0004684,2.85e-11,3;UBERON:0002275,2.85e-11,3;UBERON:0000025,1.31e-10,114;UBERON:0002038,4.51e-10,3;UBERON:0009663,4.51e-10,3;UBERON:0009661,4.51e-10,3;UBERON:0000125,4.51e-10,3;UBERON:0002308,4.51e-10,3;UBERON:0002420,8.52e-10,8;UBERON:0007245,8.52e-10,8;UBERON:0010009,8.52e-10,8;UBERON:0010011,8.52e-10,8;UBERON:0000454,8.52e-10,8;UBERON:0004111,1.28e-09,122;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0003076,8.21e-07,12;UBERON:0003057,8.21e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.367472397644862,0.0958454710182364,0,11.0115880999389,7.40586560894089,7.68032666281217,0.131886287730194,0,0.52091337055676,1.95428099300967,1.68828783009504,3.66715794664344,1.76777151284201,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,7.48953197024113,5.03250663100489,1.63350657746724,2.78118912307642,4.09144731728529,6.64921742590592,4.38051410282946,0,0.248813941220186,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,12.0412942490844,10.0802050469295,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0526446306831,0.341741761595705,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,1.12950368523413,0.920650473014354,2.29158205375759,1.20297227640581,3.42541259885321,3.7769694869485,1.35004500046361,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.229741875822453,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0,0.73171189149109,0.789209134313529,0.407412341537585,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p1@Mcf2 | |||
}} |
Latest revision as of 22:30, 1 October 2015
Short description: | p1@Mcf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mcf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -136bp_to_ENSMUST00000101531_5end |
EntrezGene: | Mcf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.85e-11 | 3 |
neuron of the substantia nigra | 4.51e-10 | 3 |
CNS neuron (sensu Vertebrata) | 6.60e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.60e-08 | 23 |