FF:10161-103A8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005474 | ||
|HumanCAGEScanFiles=NCig10032;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/globus%2520pallidus%252c%2520adult%252c%2520donor10252.NCig10032.10161-103A8.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/globus%2520pallidus%252c%2520adult%252c%2520donor10252.NCig10032.10161-103A8.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/globus%2520pallidus%252c%2520adult%252c%2520donor10252.NCig10032.10161-103A8.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/globus%2520pallidus%252c%2520adult%252c%2520donor10252.NCig10032.10161-103A8.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008659;DRR009531;DRZ000956;DRZ002341;DRZ012306;DRZ013691 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000479,UBERON:0001875,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009663,UBERON:0002420,UBERON:0002616,UBERON:0002780,UBERON:0000125,UBERON:0002020,UBERON:0007245,UBERON:0010317,UBERON:0002308,UBERON:0010009,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0006514,UBERON:0010011,UBERON:0000454 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010161 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.63!425.23!TSC22D4;;chr22:38380543..38380569,-!p1@SOX10!2.47!293.25!SOX10;;chr21:34442439..34442455,+!p1@OLIG1!2.40!247.52!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.27!376.49!C11orf9;;chr8:53322304..53322340,-!p1@ST18!2.24!172.36!ST18;;chr2:145277882..145277967,-!p3@ZEB2!2.00!167.44!ZEB2;;chr10:134599649..134599653,-!p1@NKX6-2!1.93!84.47!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.90!77.63!SOX8;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.88!74.89!PEG3;;chr3:181429704..181429722,+!p1@SOX2!1.88!74.20!SOX2;;chr8:53322347..53322378,-!p2@ST18!1.86!71.88!ST18;;chr12:26277817..26277863,-!p2@BHLHE41!1.81!85.70!BHLHE41;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.78!59.28!POU3F3;;chr21:34398234..34398250,+!p1@OLIG2!1.73!53.26!OLIG2;;chr11:47400078..47400106,-!p1@SPI1!1.69!48.19!SPI1;;chr11:113930425..113930471,+!p1@ZBTB16!1.68!67.22!ZBTB16;;chr12:26277956..26277980,-!p1@BHLHE41!1.67!156.48!BHLHE41;;chr12:54779511..54779577,-!p5@ZNF385A!1.67!46.00!ZNF385A;;chr21:34442540..34442560,+!p2@OLIG1!1.63!42.03!OLIG1;;chr10:48355030..48355090,+!p1@ZNF488!1.55!43.81!ZNF488;;chr19:46801639..46801699,+!p1@HIF3A!1.55!34.36!HIF3A;;chr16:85932760..85932775,+!p1@IRF8!1.55!34.23!IRF8;;chr9:114287433..114287513,+!p1@ZNF483!1.53!82.55!ZNF483;;chr3:126076242..126076257,-!p1@KLF15!1.53!40.80!KLF15;;chr1:214161272..214161322,+!p1@PROX1!1.50!42.58!PROX1;;chr12:106976678..106976708,+!p2@RFX4!1.50!30.39!RFX4;;chr15:80696703..80696754,+!p1@ARNT2!1.43!33.95!ARNT2;;chr12:106976774..106976788,+!p1@RFX4!1.42!25.33!RFX4;;chr3:181429741..181429767,+!p2@SOX2!1.41!24.51!SOX2;;chr4:81118647..81118666,+!p1@PRDM8!1.39!31.08!PRDM8;;chr19:13135386..13135435,+!p4@NFIX!1.38!22.86!NFIX;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.36!21.90!ZBED1;;chr7:63505799..63505904,+!p1@ZNF727!1.35!21.36!ZNF727;;chr1:61548069..61548102,+!p3@NFIA!1.34!49.29!NFIA;;chr19:30863271..30863338,+!p1@ZNF536!1.34!21.08!ZNF536;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.32!19.99!POU3F3;;chr10:64134120..64134183,+!p1@ZNF365!1.31!23.27!ZNF365;;chr14:33408072..33408114,+!p2@NPAS3!1.27!20.81!NPAS3;;chr9:77112244..77112262,+!p1@RORB!1.27!19.71!RORB;;chr8:145560111..145560165,-!p2@SCRT1!1.26!17.39!SCRT1;;chr2:95963052..95963106,+!p1@KCNIP3!1.26!17.39!KCNIP3;;chr14:33403881..33403924,+!p1@NPAS3!1.26!17.25!NPAS3;;chr1:40105299..40105326,-!p1@HEYL!1.26!17.11!HEYL;;chr19:21512115..21512135,-!p3@ZNF708!1.25!34.09!ZNF708;;chr19:21512144..21512191,-!p2@ZNF708!1.24!75.85!ZNF708;;chr2:214016314..214016343,-!p2@IKZF2!1.24!27.38!IKZF2;;chr3:126076264..126076305,-!p2@KLF15!1.24!23.00!KLF15;;chr17:53342311..53342400,+!p1@HLF!1.24!18.62!HLF;;chr5:71803177..71803255,-!p1@ZNF366!1.24!16.57!ZNF366;;chr12:26277929..26277955,-!p3@BHLHE41!1.23!22.59!BHLHE41;;chr14:33403648..33403710,+!p3@NPAS3!1.23!15.88!NPAS3;;chr19:21512202..21512225,-!p1@ZNF708!1.21!78.04!ZNF708;;chr7:115670804..115670825,-!p1@TFEC!1.21!15.33!TFEC;;chr16:51185172..51185197,-!p1@SALL1!1.21!15.06!SALL1;;chr17:38219209..38219230,+!p1@THRA!1.19!184.14!THRA;;chr16:51185318..51185348,-!p2@SALL1!1.19!14.51!SALL1;;chr2:68592406..68592424,+!p1@PLEK!1.18!14.24!PLEK;;chr20:50159198..50159299,-!p1@NFATC2!1.17!20.13!NFATC2;;chr6:28321971..28321995,-!p1@ZNF323!1.17!13.69!ZNF323;;chr17:47439437..47439533,-!p1@ZNF652!1.16!109.80!ZNF652;;chr3:187463179..187463201,-!p2@BCL6!1.16!55.72!BCL6;;chr16:79634624..79634642,-!p1@MAF!1.16!52.16!MAF;;chr14:73360799..73360817,-!p1@DPF3!1.16!46.00!DPF3;;chr21:39870339..39870443,-!p1@ERG!1.16!13.55!ERG;;chr11:113930401..113930422,+!p3@ZBTB16!1.15!13.14!ZBTB16;;chr11:47400062..47400077,-!p2@SPI1!1.15!13.14!SPI1;;chr17:7492684..7492778,-!p2@SOX15!1.14!26.83!SOX15;;chr8:53322411..53322422,-!p6@ST18!1.14!12.87!ST18;;chr13:72441315..72441454,-!p1@DACH1!1.12!24.64!DACH1;;chr12:54778471..54778528,-!p1@ZNF385A!1.12!12.32!ZNF385A;;chr21:34442584..34442587,+!p3@OLIG1!1.12!12.18!OLIG1;;chr14:29235961..29236008,+!p1@FOXG1!1.12!12.05!FOXG1;;chr4:26344778..26344807,+!p8@RBPJ!1.11!11.91!RBPJ;;chr19:46800289..46800327,+!p2@HIF3A!1.11!11.77!HIF3A;;chr7:28725740..28725778,+!p1@CREB5!1.10!102.68!CREB5;;chr6:126070769..126070801,+!p1@HEY2!1.10!13.42!HEY2;;chr12:103351444..103351461,+!p1@ASCL1!1.10!11.64!ASCL1;;chr22:41763452..41763466,+!p2@TEF!1.10!11.50!TEF;;chr6:126112074..126112144,+!p1@NCOA7!1.09!151.01!NCOA7;;chr6:19837592..19837621,+!p1@ID4!1.09!69.27!ID4;;chr11:113930291..113930339,+!p2@ZBTB16!1.09!18.76!ZBTB16;;chr3:114819124..114819200,-!p3@ZBTB20!1.08!25.74!ZBTB20;;chr3:114343039..114343085,-!p8@ZBTB20!1.08!11.09!ZBTB20;;chr9:14314946..14314983,-!p8@NFIB!1.08!11.09!NFIB;;chr10:111987079..111987115,+!p3@MXI1!1.07!14.79!MXI1;;chr16:67198683..67198698,+!p2@HSF4!1.07!10.68!HSF4;;chr20:62680984..62680999,-!p1@SOX18!1.06!13.83!SOX18;;chr18:52989031..52989079,-!p2@TCF4!1.05!24.51!TCF4;;chr2:178128250..178128293,-!p6@NFE2L2!1.04!25.46!NFE2L2;;chr11:31832862..31832884,-!p2@PAX6!1.04!9.99!PAX6;;chrX:25034067..25034088,-!p1@ARX!1.04!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| |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.63!425.23!TSC22D4;;chr22:38380543..38380569,-!p1@SOX10!2.47!293.25!SOX10;;chr21:34442439..34442455,+!p1@OLIG1!2.40!247.52!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.27!376.49!C11orf9;;chr8:53322304..53322340,-!p1@ST18!2.24!172.36!ST18;;chr2:145277882..145277967,-!p3@ZEB2!2.00!167.44!ZEB2;;chr10:134599649..134599653,-!p1@NKX6-2!1.93!84.47!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.90!77.63!SOX8;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.88!74.89!PEG3;;chr3:181429704..181429722,+!p1@SOX2!1.88!74.20!SOX2;;chr8:53322347..53322378,-!p2@ST18!1.86!71.88!ST18;;chr12:26277817..26277863,-!p2@BHLHE41!1.81!85.70!BHLHE41;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.78!59.28!POU3F3;;chr21:34398234..34398250,+!p1@OLIG2!1.73!53.26!OLIG2;;chr11:47400078..47400106,-!p1@SPI1!1.69!48.19!SPI1;;chr11:113930425..113930471,+!p1@ZBTB16!1.68!67.22!ZBTB16;;chr12:26277956..26277980,-!p1@BHLHE41!1.67!156.48!BHLHE41;;chr12:54779511..54779577,-!p5@ZNF385A!1.67!46.00!ZNF385A;;chr21:34442540..34442560,+!p2@OLIG1!1.63!42.03!OLIG1;;chr10:48355030..48355090,+!p1@ZNF488!1.55!43.81!ZNF488;;chr19:46801639..46801699,+!p1@HIF3A!1.55!34.36!HIF3A;;chr16:85932760..85932775,+!p1@IRF8!1.55!34.23!IRF8;;chr9:114287433..114287513,+!p1@ZNF483!1.53!82.55!ZNF483;;chr3:126076242..126076257,-!p1@KLF15!1.53!40.80!KLF15;;chr1:214161272..214161322,+!p1@PROX1!1.50!42.58!PROX1;;chr12:106976678..106976708,+!p2@RFX4!1.50!30.39!RFX4;;chr15:80696703..80696754,+!p1@ARNT2!1.43!33.95!ARNT2;;chr12:106976774..106976788,+!p1@RFX4!1.42!25.33!RFX4;;chr3:181429741..181429767,+!p2@SOX2!1.41!24.51!SOX2;;chr4:81118647..81118666,+!p1@PRDM8!1.39!31.08!PRDM8;;chr19:13135386..13135435,+!p4@NFIX!1.38!22.86!NFIX;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.36!21.90!ZBED1;;chr7:63505799..63505904,+!p1@ZNF727!1.35!21.36!ZNF727;;chr1:61548069..61548102,+!p3@NFIA!1.34!49.29!NFIA;;chr19:30863271..30863338,+!p1@ZNF536!1.34!21.08!ZNF536;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.32!19.99!POU3F3;;chr10:64134120..64134183,+!p1@ZNF365!1.31!23.27!ZNF365;;chr14:33408072..33408114,+!p2@NPAS3!1.27!20.81!NPAS3;;chr9:77112244..77112262,+!p1@RORB!1.27!19.71!RORB;;chr8:145560111..145560165,-!p2@SCRT1!1.26!17.39!SCRT1;;chr2:95963052..95963106,+!p1@KCNIP3!1.26!17.39!KCNIP3;;chr14:33403881..33403924,+!p1@NPAS3!1.26!17.25!NPAS3;;chr1:40105299..40105326,-!p1@HEYL!1.26!17.11!HEYL;;chr19:21512115..21512135,-!p3@ZNF708!1.25!34.09!ZNF708;;chr19:21512144..21512191,-!p2@ZNF708!1.24!75.85!ZNF708;;chr2:214016314..214016343,-!p2@IKZF2!1.24!27.38!IKZF2;;chr3:126076264..126076305,-!p2@KLF15!1.24!23.00!KLF15;;chr17:53342311..53342400,+!p1@HLF!1.24!18.62!HLF;;chr5:71803177..71803255,-!p1@ZNF366!1.24!16.57!ZNF366;;chr12:26277929..26277955,-!p3@BHLHE41!1.23!22.59!BHLHE41;;chr14:33403648..33403710,+!p3@NPAS3!1.23!15.88!NPAS3;;chr19:21512202..21512225,-!p1@ZNF708!1.21!78.04!ZNF708;;chr7:115670804..115670825,-!p1@TFEC!1.21!15.33!TFEC;;chr16:51185172..51185197,-!p1@SALL1!1.21!15.06!SALL1;;chr17:38219209..38219230,+!p1@THRA!1.19!184.14!THRA;;chr16:51185318..51185348,-!p2@SALL1!1.19!14.51!SALL1;;chr2:68592406..68592424,+!p1@PLEK!1.18!14.24!PLEK;;chr20:50159198..50159299,-!p1@NFATC2!1.17!20.13!NFATC2;;chr6:28321971..28321995,-!p1@ZNF323!1.17!13.69!ZNF323;;chr17:47439437..47439533,-!p1@ZNF652!1.16!109.80!ZNF652;;chr3:187463179..187463201,-!p2@BCL6!1.16!55.72!BCL6;;chr16:79634624..79634642,-!p1@MAF!1.16!52.16!MAF;;chr14:73360799..73360817,-!p1@DPF3!1.16!46.00!DPF3;;chr21:39870339..39870443,-!p1@ERG!1.16!13.55!ERG;;chr11:113930401..113930422,+!p3@ZBTB16!1.15!13.14!ZBTB16;;chr11:47400062..47400077,-!p2@SPI1!1.15!13.14!SPI1;;chr17:7492684..7492778,-!p2@SOX15!1.14!26.83!SOX15;;chr8:53322411..53322422,-!p6@ST18!1.14!12.87!ST18;;chr13:72441315..72441454,-!p1@DACH1!1.12!24.64!DACH1;;chr12:54778471..54778528,-!p1@ZNF385A!1.12!12.32!ZNF385A;;chr21:34442584..34442587,+!p3@OLIG1!1.12!12.18!OLIG1;;chr14:29235961..29236008,+!p1@FOXG1!1.12!12.05!FOXG1;;chr4:26344778..26344807,+!p8@RBPJ!1.11!11.91!RBPJ;;chr19:46800289..46800327,+!p2@HIF3A!1.11!11.77!HIF3A;;chr7:28725740..28725778,+!p1@CREB5!1.10!102.68!CREB5;;chr6:126070769..126070801,+!p1@HEY2!1.10!13.42!HEY2;;chr12:103351444..103351461,+!p1@ASCL1!1.10!11.64!ASCL1;;chr22:41763452..41763466,+!p2@TEF!1.10!11.50!TEF;;chr6:126112074..126112144,+!p1@NCOA7!1.09!151.01!NCOA7;;chr6:19837592..19837621,+!p1@ID4!1.09!69.27!ID4;;chr11:113930291..113930339,+!p2@ZBTB16!1.09!18.76!ZBTB16;;chr3:114819124..114819200,-!p3@ZBTB20!1.08!25.74!ZBTB20;;chr3:114343039..114343085,-!p8@ZBTB20!1.08!11.09!ZBTB20;;chr9:14314946..14314983,-!p8@NFIB!1.08!11.09!NFIB;;chr10:111987079..111987115,+!p3@MXI1!1.07!14.79!MXI1;;chr16:67198683..67198698,+!p2@HSF4!1.07!10.68!HSF4;;chr20:62680984..62680999,-!p1@SOX18!1.06!13.83!SOX18;;chr18:52989031..52989079,-!p2@TCF4!1.05!24.51!TCF4;;chr2:178128250..178128293,-!p6@NFE2L2!1.04!25.46!NFE2L2;;chr11:31832862..31832884,-!p2@PAX6!1.04!9.99!PAX6;;chrX:25034067..25034088,-!p1@ARX!1.04!9.99!ARX;;chr16:67198633..67198671,+!p1@HSF4!1.04!9.86!HSF4;;chr17:70117153..70117174,+!p1@SOX9!1.03!100.49!SOX9;;chrX:70315688..70315709,+!p1@FOXO4!1.03!23.14!FOXO4;;chr12:106976656..106976672,+!p4@RFX4!1.03!9.72!RFX4;;chr2:95963120..95963136,+!p2@KCNIP3!1.02!9.58!KCNIP3;;chr4:26344754..26344772,+!p10@RBPJ!1.02!9.45!RBPJ;;chr3:114343768..114343822,-!p1@ZBTB20!1.01!41.21!ZBTB20;;chr19:38085768..38085821,+!p1@ZNF540!1.01!14.10!ZNF540;;chr11:8102846..8102892,+!p1@TUB!1.01!13.01!TUB;;chr19:53636125..53636178,-!p1@ZNF415!1.00!25.88!ZNF415;;chr18:6414884..6414942,-!p1@L3MBTL4!1.00!11.36!L3MBTL4;;chr20:21494654..21494678,-!p2@NKX2-2!1.00!9.04!NKX2-2;;chr3:147127142..147127168,+!p1@ZIC1!1.00!9.04!ZIC1;;chr11:31832658..31832681,-!p1@PAX6!1.00!8.90!PAX6;;chr15:57210961..57211012,+!p3@TCF12!0.99!28.75!TCF12;;chr19:9879350..9879419,-!p2@ZNF846!0.99!18.89!ZNF846;;chr15:57511609..57511651,+!p2@TCF12!0.99!14.92!TCF12;;chr2:166326200..166326216,+!p1@CSRNP3!0.99!13.14!CSRNP3;;chr17:17726907..17726958,-!p2@SREBF1!0.98!54.08!SREBF1;;chr18:47814186..47814232,-!p2@CXXC1!0.98!17.80!CXXC1;;chr16:79634595..79634620,-!p2@MAF!0.98!15.88!MAF;;chr2:145275982..145276003,-!p7@ZEB2!0.98!8.63!ZEB2;;chr9:1050331..1050363,+!p1@DMRT2!0.98!8.63!DMRT2;;chr2:60781201..60781258,-!p3@BCL11A!0.98!8.49!BCL11A;;chr3:114866084..114866118,-!p2@ZBTB20!0.97!31.08!ZBTB20;;chr1:170632285..170632309,+!p1@PRRX1!0.97!9.45!PRRX1;;chr19:22193731..22193751,-!p1@ZNF208!0.97!8.35!ZNF208;;chr5:178368186..178368238,+!p1@ZNF454!0.96!14.79!ZNF454;;chr8:30890810..30890880,-!p1@PURG!0.96!8.21!PURG;;chr7:50344289..50344323,+!p1@IKZF1!0.96!8.08!IKZF1;;chr14:21994337..21994442,-!p1@SALL2!0.95!22.59!SALL2;;chr5:139487363..139487444,+!p1@PURA!0.94!60.10!PURA;;chr16:86544113..86544145,+!p1@FOXF1!0.94!9.58!FOXF1;;chr15:80735246..80735321,+!p3@ARNT2!0.94!7.80!ARNT2;;chr3:114173720..114173794,-!p6@ZBTB20!0.94!7.80!ZBTB20;;chr8:10588010..10588030,-!p1@SOX7!0.94!7.80!SOX7;;chr7:64023441..64023462,-!p1@ZNF680!0.93!62.29!ZNF680;;chr17:41277479..41277510,-!p5@BRCA1!0.93!10.54!BRCA1;;chrX:107018969..107019024,-!p6@TSC22D3!0.93!10.54!TSC22D3;;chr3:141105705..141105770,+!p4@ZBTB38!0.93!9.31!ZBTB38;;chr12:103352277..103352324,+!p2@ASCL1!0.93!7.53!ASCL1;;chr9:73029219..73029289,-!p2@KLF9!0.92!22.86!KLF9;;chr20:2673383..2673441,+!p1@EBF4!0.92!11.77!EBF4;;chr19:57183114..57183145,-!p1@ZNF835!0.92!8.21!ZNF835;;chr6:41701557..41701578,-!p3@TFEB!0.92!7.26!TFEB;;chr14:29236269..29236285,+!p3@FOXG1!0.92!7.26!FOXG1;;chr19:57019215..57019250,+!p1@ZNF471!0.91!10.82!ZNF471;;chr3:52001396..52001425,-!p4@PCBP4!0.90!12.73!PCBP4;;chr7:86781858..86781879,+!p3@DMTF1!0.90!11.50!DMTF1;;chr8:80679993..80680011,-!p1@HEY1!0.90!10.27!HEY1;;chr19:13135582..13135600,+!p3@NFIX!0.90!6.98!NFIX;;chr5:88178983..88179012,-!p1@MEF2C!0.89!55.17!MEF2C;;chr7:6655225..6655279,+!p1@ENST00000457543!0.89!10.54!ZNF853;;chr14:29234581..29234601,+!p2@FOXG1!0.89!6.71!FOXG1;;chr1:8877692..8877732,-!p1@RERE!0.88!56.68!RERE;;chr8:77593474..77593612,+!p1@ZFHX4!0.88!29.57!ZFHX4;;chr1:61547894..61547968,+!p2@NFIA!0.87!19.71!NFIA;;chr1:61924375..61924380,+!p6@NFIA!0.87!9.17!NFIA;;chr2:113057415..113057477,+!p3@ZC3H6!0.87!8.63!ZC3H6;;chr3:147111231..147111281,+!p3@ZIC1!0.87!6.43!ZIC1;;chr8:53322384..53322393,-!p7@ST18!0.87!6.43!ST18;;chr18:55102598..55102623,+!p1@ONECUT2!0.87!6.43!ONECUT2;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.87!6.43!ZNF676;;chr5:172483347..172483407,+!p1@C5orf41!0.86!49.97!CREBRF;;chr2:145274900..145274934,-!p4@ZEB2!0.86!40.11!ZEB2;;chr2:145275162..145275202,-!p2@ZEB2!0.86!38.74!ZEB2;;chr7:28448965..28448994,+!p2@CREB5!0.86!22.86!CREB5;;chr12:24715376..24715432,-!p1@SOX5!0.86!8.08!SOX5;;chr10:64134045..64134083,+!p3@ZNF365!0.86!6.30!ZNF365;;chr15:80696666..80696700,+!p4@ARNT2!0.86!6.30!ARNT2;;chrX:101186981..101187030,-!p1@ZMAT1!0.85!21.08!ZMAT1;;chr2:74229812..74229867,+!p1@TET3!0.85!16.02!TET3;;chr7:64023410..64023428,-!p2@ZNF680!0.85!9.99!ZNF680;;chr6:41701581..41701613,-!p2@TFEB!0.85!6.16!TFEB;;chr8:40755333..40755352,-!p1@ZMAT4!0.85!6.16!ZMAT4;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!0.85!6.16!SMARCE1;;chr15:42749722..42749739,-!p2@ZFP106!0.84!11.09!ZFP106;;chr2:145277640..145277771,-!p1@ZEB2!0.83!82.01!ZEB2;;chr19:20748574..20748599,-!p1@ZNF737!0.83!36.96!ZNF737;;chr17:38219184..38219195,+!p3@THRA!0.83!11.91!THRA;;chr16:79633894..79633954,-!p3@MAF!0.83!11.64!MAF;;chr18:52989081..52989117,-!p7@TCF4!0.83!9.04!TCF4;;chr20:51588873..51588953,+!p1@TSHZ2!0.83!7.80!TSHZ2;;chr3:147111198..147111225,+!p4@ZIC1!0.83!5.75!ZIC1;;chr14:21994449..21994524,-!p2@SALL2!0.82!17.66!SALL2;;chr15:41913690..41913753,+!p2@MGA!0.82!14.24!MGA;;chr6:91006518..91006570,-!p1@BACH2!0.82!13.42!BACH2;;chr5:124084493..124084524,-!p2@ZNF608!0.82!13.28!ZNF608;;chr3:169381420..169381535,-!p1@MECOM!0.82!6.71!MECOM;;chrX:107019163..107019179,-!p7@TSC22D3!0.82!6.57!TSC22D3;;chr6:41701898..41701939,-!p5@TFEB!0.82!5.61!TFEB;;chr10:111985777..111985788,+!p4@MXI1!0.82!5.61!MXI1;;chr19:58446721..58446779,-!p1@ZNF418!0.81!16.15!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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000454;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001875;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002308;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009663 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/globus%2520pallidus%252c%2520adult%252c%2520donor10252.CNhs12319.10161-103A8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/globus%2520pallidus%252c%2520adult%252c%2520donor10252.CNhs12319.10161-103A8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/globus%2520pallidus%252c%2520adult%252c%2520donor10252.CNhs12319.10161-103A8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/globus%2520pallidus%252c%2520adult%252c%2520donor10252.CNhs12319.10161-103A8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/globus%2520pallidus%252c%2520adult%252c%2520donor10252.CNhs12319.10161-103A8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10161-103A8 | |id=FF:10161-103A8 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0010161 | ||
|is_obsolete= | |||
|library_id=CNhs12319 | |||
|library_id_phase_based=2:CNhs12319 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10161 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10161 | |||
|name=globus pallidus, adult, donor10252 | |name=globus pallidus, adult, donor10252 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=NCig10032,,, | |profile_cagescan=NCig10032,,, | ||
|profile_hcage=CNhs12319,LSID913,release011,COMPLETED | |profile_hcage=CNhs12319,LSID913,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0.0557243212092205,0,0,0,0.11323897456932,0.260413027427314,0,-0.0108783959759723,0.226477949138639,0.181916783182469,0.635279559636989,0,0.149439634110414,0,0,0,0,0,0,0,0.149439634110414,0,0,0,-0.153323010348428,0,0.0948323794014105,0,0.431591438741172,0,0.490315262710462,0,0,0.423490916880396,0,0,0,0,0,0,0,0,0,0,0,0,-0.0654851001933114,0.44400885196877,0,0,0,0,0,0,0,0.0283374350552566,0,0.105104912336182,0,0.348723066391645,0,0.181671163353782,0.189664758802821,0.749582042908207,0,0,0.0923211315897241,0,0,0,0,0,0,0,0,0.105104912336182,0,0,0,0.0557243212092205,0.105104912336182,0,0,0.105104912336182,0.121657828030426,0.16579143073741,0.226477949138639,0.105104912336182,0.052552456168091,0,0.189664758802821,0.285454100989272,0.423438483636883,0,0.274756655738363,0.431734295464594,0.270226637497939,0.052552456168091,0.105104912336182,0.052552456168091,0.105104912336182,0.223199053611019,0.49508328871121,0,0,0,0,0,0,0.226477949138639,0,0,0,0,0.0557243212092205,0,0,0,0,0,-0.0216537768672541,0.321234404848725,0,0,0.122830148145337,0.146648487976295,0,0,0.110372591900321,0.25412993865875,0,0 | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=102.477 | |rna_weight_ug=102.477 | ||
|sample_age=76 | |sample_age=76 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.8493614240635e-241!GO:0005737;cytoplasm;1.87817887257745e-151!GO:0043226;organelle;5.04261449832658e-125!GO:0043229;intracellular organelle;1.49898467007902e-124!GO:0043227;membrane-bound organelle;8.68293921964344e-119!GO:0043231;intracellular membrane-bound organelle;1.54201833284053e-118!GO:0044444;cytoplasmic part;1.28124949444607e-93!GO:0005515;protein binding;1.01420452399261e-73!GO:0044422;organelle part;8.66642167477267e-71!GO:0044446;intracellular organelle part;1.11204994285497e-69!GO:0032991;macromolecular complex;1.55948263980498e-59!GO:0003723;RNA binding;6.98583936050004e-45!GO:0016043;cellular component organization and biogenesis;8.13057580496776e-45!GO:0030529;ribonucleoprotein complex;3.80441304278674e-43!GO:0005634;nucleus;8.68659388505805e-43!GO:0044428;nuclear part;7.25333223791416e-42!GO:0044238;primary metabolic process;7.63257314442428e-42!GO:0043233;organelle lumen;3.8288817591238e-40!GO:0031974;membrane-enclosed lumen;3.8288817591238e-40!GO:0044237;cellular metabolic process;4.1807052091953e-40!GO:0043170;macromolecule metabolic process;1.00333946926598e-39!GO:0005739;mitochondrion;1.07978936949529e-37!GO:0033036;macromolecule localization;5.40081984553369e-37!GO:0015031;protein transport;4.74081647635868e-36!GO:0031090;organelle membrane;6.64379659024269e-34!GO:0008104;protein localization;2.11522888386797e-33!GO:0045184;establishment of protein localization;8.165072518152e-33!GO:0043234;protein complex;1.07145394545392e-31!GO:0046907;intracellular transport;7.64620776181401e-31!GO:0016071;mRNA metabolic process;1.1525097787216e-30!GO:0006396;RNA processing;1.11907413826072e-28!GO:0031975;envelope;9.84350024266907e-28!GO:0019538;protein metabolic process;1.53220759344345e-27!GO:0031967;organelle envelope;1.61701543779003e-27!GO:0008380;RNA splicing;2.28836653028264e-27!GO:0043283;biopolymer metabolic process;4.41768763521055e-27!GO:0044429;mitochondrial part;1.19669339308988e-26!GO:0031981;nuclear lumen;4.38068116015891e-26!GO:0005829;cytosol;3.71221040238619e-25!GO:0006397;mRNA processing;1.6828169392424e-24!GO:0051649;establishment of cellular localization;2.57163068513226e-24!GO:0051641;cellular localization;4.26038880374215e-24!GO:0044260;cellular macromolecule metabolic process;4.94099883545721e-24!GO:0044267;cellular protein metabolic process;1.76806220032706e-23!GO:0006886;intracellular protein transport;1.53034706423282e-22!GO:0016192;vesicle-mediated transport;1.81459944685017e-22!GO:0006996;organelle organization and biogenesis;2.61147359981418e-22!GO:0010467;gene expression;5.25891668254751e-22!GO:0005840;ribosome;2.70844318522607e-20!GO:0005740;mitochondrial envelope;2.13957952245717e-19!GO:0006412;translation;4.72049357376255e-19!GO:0000166;nucleotide binding;5.93582652641604e-19!GO:0005681;spliceosome;6.21584940159868e-19!GO:0031966;mitochondrial membrane;1.17243978489727e-18!GO:0065003;macromolecular complex assembly;3.08555578894595e-18!GO:0019866;organelle inner membrane;3.11368398238132e-18!GO:0006119;oxidative phosphorylation;1.08934102005945e-17!GO:0005654;nucleoplasm;2.8264061848877e-17!GO:0005743;mitochondrial inner membrane;5.14353943131493e-17!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.5647428907215e-16!GO:0005794;Golgi apparatus;3.02632241465934e-16!GO:0022607;cellular component assembly;3.62371452771249e-16!GO:0044451;nucleoplasm part;1.19736096272767e-15!GO:0009058;biosynthetic process;1.38137064229093e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.42839017092358e-15!GO:0003735;structural constituent of ribosome;1.45415467585005e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.7177278532913e-15!GO:0016462;pyrophosphatase activity;1.72954272668349e-15!GO:0006512;ubiquitin cycle;1.2854408400603e-14!GO:0017111;nucleoside-triphosphatase activity;1.40042718613767e-14!GO:0009059;macromolecule biosynthetic process;2.32779805730195e-14!GO:0016874;ligase activity;3.56755959849666e-14!GO:0043412;biopolymer modification;5.8367699981542e-14!GO:0044455;mitochondrial membrane part;9.90239681073018e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.50705802693175e-13!GO:0033279;ribosomal subunit;2.06598066320788e-13!GO:0044249;cellular biosynthetic process;2.35503141652616e-13!GO:0008134;transcription factor binding;2.48449159371714e-13!GO:0032553;ribonucleotide binding;2.81272197393839e-13!GO:0032555;purine ribonucleotide binding;2.81272197393839e-13!GO:0006464;protein modification process;3.31169977368899e-13!GO:0043687;post-translational protein modification;4.86904853182813e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;5.69514160370066e-13!GO:0006511;ubiquitin-dependent protein catabolic process;5.70716310462846e-13!GO:0043228;non-membrane-bound organelle;6.83049073478451e-13!GO:0043232;intracellular non-membrane-bound organelle;6.83049073478451e-13!GO:0019941;modification-dependent protein catabolic process;7.88430762533557e-13!GO:0043632;modification-dependent macromolecule catabolic process;7.88430762533557e-13!GO:0005746;mitochondrial respiratory chain;8.39292693533135e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.36252169180919e-13!GO:0012505;endomembrane system;1.11245035761077e-12!GO:0017076;purine nucleotide binding;1.13811776794816e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.1547374341039e-12!GO:0003954;NADH dehydrogenase activity;1.1547374341039e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.1547374341039e-12!GO:0044257;cellular protein catabolic process;1.1547374341039e-12!GO:0016070;RNA metabolic process;1.76737683703763e-12!GO:0006457;protein folding;2.75892481852636e-12!GO:0044265;cellular macromolecule catabolic process;4.55930139906886e-12!GO:0030695;GTPase regulator activity;4.76801211393112e-12!GO:0031982;vesicle;4.94255150695182e-12!GO:0048770;pigment granule;9.6489426778344e-12!GO:0042470;melanosome;9.6489426778344e-12!GO:0022618;protein-RNA complex assembly;2.15795407094022e-11!GO:0031410;cytoplasmic vesicle;2.59808406860299e-11!GO:0016604;nuclear body;2.96012902591146e-11!GO:0044445;cytosolic part;4.32174683429926e-11!GO:0006605;protein targeting;5.23795007763837e-11!GO:0043285;biopolymer catabolic process;5.66481897472478e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.57831878220689e-11!GO:0045271;respiratory chain complex I;6.57831878220689e-11!GO:0005747;mitochondrial respiratory chain complex I;6.57831878220689e-11!GO:0005768;endosome;1.00027206645342e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.04906374512881e-10!GO:0042773;ATP synthesis coupled electron transport;1.04906374512881e-10!GO:0031988;membrane-bound vesicle;1.47477805402479e-10!GO:0048193;Golgi vesicle transport;1.65550764787547e-10!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.88410047613864e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.94751936024044e-10!GO:0016607;nuclear speck;3.06309579093901e-10!GO:0008092;cytoskeletal protein binding;3.29352135940865e-10!GO:0005783;endoplasmic reticulum;3.98300020080878e-10!GO:0051082;unfolded protein binding;4.14945123255522e-10!GO:0007264;small GTPase mediated signal transduction;5.0001850619877e-10!GO:0003676;nucleic acid binding;6.42597505886486e-10!GO:0016023;cytoplasmic membrane-bound vesicle;6.68455925320181e-10!GO:0030163;protein catabolic process;7.02448666252412e-10!GO:0031980;mitochondrial lumen;8.99079022964195e-10!GO:0005759;mitochondrial matrix;8.99079022964195e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.12327332045898e-09!GO:0008135;translation factor activity, nucleic acid binding;1.45922211477813e-09!GO:0005083;small GTPase regulator activity;1.73648876555061e-09!GO:0044248;cellular catabolic process;1.86813799354959e-09!GO:0006793;phosphorus metabolic process;2.3380546560783e-09!GO:0006796;phosphate metabolic process;2.3380546560783e-09!GO:0048523;negative regulation of cellular process;2.74456055638787e-09!GO:0008565;protein transporter activity;4.06532435177081e-09!GO:0050794;regulation of cellular process;4.2233668438206e-09!GO:0009057;macromolecule catabolic process;5.32302006743354e-09!GO:0005730;nucleolus;6.04817058250263e-09!GO:0005635;nuclear envelope;6.86034495027337e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.10212293423284e-09!GO:0016044;membrane organization and biogenesis;7.10697569913702e-09!GO:0030036;actin cytoskeleton organization and biogenesis;8.65546911652966e-09!GO:0006461;protein complex assembly;9.45352576061765e-09!GO:0031252;leading edge;1.01876900586279e-08!GO:0007010;cytoskeleton organization and biogenesis;1.01876900586279e-08!GO:0019899;enzyme binding;1.24977800970477e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.5417935716809e-08!GO:0000375;RNA splicing, via transesterification reactions;1.5417935716809e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.5417935716809e-08!GO:0003924;GTPase activity;1.63169744107682e-08!GO:0031965;nuclear membrane;2.63152397696338e-08!GO:0008639;small protein conjugating enzyme activity;2.77502645343084e-08!GO:0006913;nucleocytoplasmic transport;3.43696536714279e-08!GO:0032559;adenyl ribonucleotide binding;3.56610561578841e-08!GO:0050789;regulation of biological process;3.61292518723876e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.61727487076872e-08!GO:0004842;ubiquitin-protein ligase activity;4.10183408641985e-08!GO:0006446;regulation of translational initiation;4.42156112887079e-08!GO:0019787;small conjugating protein ligase activity;5.09609162940433e-08!GO:0005525;GTP binding;5.21666926362643e-08!GO:0051169;nuclear transport;5.7578038354614e-08!GO:0005524;ATP binding;6.88018859539114e-08!GO:0015935;small ribosomal subunit;9.54105474866961e-08!GO:0030029;actin filament-based process;1.08839486827877e-07!GO:0006259;DNA metabolic process;1.12632378095991e-07!GO:0030554;adenyl nucleotide binding;1.36639350702692e-07!GO:0048519;negative regulation of biological process;1.55500518260351e-07!GO:0019829;cation-transporting ATPase activity;1.8764097420517e-07!GO:0003712;transcription cofactor activity;1.97270885077146e-07!GO:0016564;transcription repressor activity;2.71787034151356e-07!GO:0006413;translational initiation;2.79871328906779e-07!GO:0016881;acid-amino acid ligase activity;3.63008173899751e-07!GO:0045045;secretory pathway;3.70151490808024e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.00511438926545e-07!GO:0003743;translation initiation factor activity;4.72571171353682e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.2763258546209e-07!GO:0012501;programmed cell death;6.83711455876113e-07!GO:0016568;chromatin modification;7.36952559487199e-07!GO:0006915;apoptosis;7.60977490324558e-07!GO:0005096;GTPase activator activity;8.28624699798275e-07!GO:0032561;guanyl ribonucleotide binding;9.50319656814911e-07!GO:0019001;guanyl nucleotide binding;9.50319656814911e-07!GO:0051186;cofactor metabolic process;9.63242807265694e-07!GO:0008219;cell death;1.04272476292587e-06!GO:0016265;death;1.04272476292587e-06!GO:0044440;endosomal part;1.04272476292587e-06!GO:0010008;endosome membrane;1.04272476292587e-06!GO:0015631;tubulin binding;1.04790046179397e-06!GO:0016887;ATPase activity;1.16749658405337e-06!GO:0016310;phosphorylation;1.32819453991823e-06!GO:0005769;early endosome;1.53912852347467e-06!GO:0015934;large ribosomal subunit;1.57651175123059e-06!GO:0044431;Golgi apparatus part;1.79179554491018e-06!GO:0015986;ATP synthesis coupled proton transport;1.94734745017945e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.94734745017945e-06!GO:0008047;enzyme activator activity;2.12035468256837e-06!GO:0051246;regulation of protein metabolic process;2.21071839779692e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.49735411580128e-06!GO:0045786;negative regulation of progression through cell cycle;2.72410577251629e-06!GO:0006366;transcription from RNA polymerase II promoter;2.72410577251629e-06!GO:0042623;ATPase activity, coupled;2.97968912462406e-06!GO:0005770;late endosome;3.17621599960879e-06!GO:0017038;protein import;3.35714901903495e-06!GO:0044432;endoplasmic reticulum part;4.40703806333209e-06!GO:0015630;microtubule cytoskeleton;5.26717461230131e-06!GO:0007265;Ras protein signal transduction;5.62746171789916e-06!GO:0006897;endocytosis;5.75780879079246e-06!GO:0010324;membrane invagination;5.75780879079246e-06!GO:0044453;nuclear membrane part;6.03050046697192e-06!GO:0003779;actin binding;7.82326950846497e-06!GO:0006323;DNA packaging;8.4008116748511e-06!GO:0009060;aerobic respiration;1.04334436482859e-05!GO:0008287;protein serine/threonine phosphatase complex;1.04334436482859e-05!GO:0048471;perinuclear region of cytoplasm;1.10352629243357e-05!GO:0005761;mitochondrial ribosome;1.18051447724544e-05!GO:0000313;organellar ribosome;1.18051447724544e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.36224140259783e-05!GO:0050657;nucleic acid transport;1.49309738544027e-05!GO:0051236;establishment of RNA localization;1.49309738544027e-05!GO:0050658;RNA transport;1.49309738544027e-05!GO:0005773;vacuole;1.54911529656815e-05!GO:0006403;RNA localization;1.59024406063789e-05!GO:0009150;purine ribonucleotide metabolic process;1.80234473892183e-05!GO:0048475;coated membrane;1.80234473892183e-05!GO:0030117;membrane coat;1.80234473892183e-05!GO:0045333;cellular respiration;1.90269576630535e-05!GO:0006163;purine nucleotide metabolic process;1.9143604380384e-05!GO:0009056;catabolic process;1.97939958451088e-05!GO:0046034;ATP metabolic process;2.02086680961133e-05!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.03602843306138e-05!GO:0030027;lamellipodium;2.15824924647186e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.39667452033099e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.48108724441674e-05!GO:0009055;electron carrier activity;2.61486619638136e-05!GO:0051128;regulation of cellular component organization and biogenesis;2.71186889073032e-05!GO:0006164;purine nucleotide biosynthetic process;2.77871023858439e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.32447396387384e-05!GO:0007049;cell cycle;3.39444400466357e-05!GO:0008017;microtubule binding;3.43102242106363e-05!GO:0007242;intracellular signaling cascade;3.79512158148935e-05!GO:0006754;ATP biosynthetic process;3.86198014993667e-05!GO:0006753;nucleoside phosphate metabolic process;3.86198014993667e-05!GO:0032446;protein modification by small protein conjugation;4.0275341672571e-05!GO:0065007;biological regulation;4.09235885807164e-05!GO:0005643;nuclear pore;4.62823569704245e-05!GO:0009259;ribonucleotide metabolic process;4.82628616573722e-05!GO:0045259;proton-transporting ATP synthase complex;4.95726643418973e-05!GO:0003714;transcription corepressor activity;4.96206687910243e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.99065016433256e-05!GO:0009144;purine nucleoside triphosphate metabolic process;4.99065016433256e-05!GO:0006099;tricarboxylic acid cycle;5.05018064684482e-05!GO:0046356;acetyl-CoA catabolic process;5.05018064684482e-05!GO:0009199;ribonucleoside triphosphate metabolic process;5.1618062684394e-05!GO:0000245;spliceosome assembly;5.58517407460102e-05!GO:0005905;coated pit;5.83466862055046e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.32780102064227e-05!GO:0009141;nucleoside triphosphate metabolic process;6.6269726722758e-05!GO:0001726;ruffle;6.6269726722758e-05!GO:0009892;negative regulation of metabolic process;7.01852655141506e-05!GO:0015078;hydrogen ion transmembrane transporter activity;7.57739207264733e-05!GO:0000151;ubiquitin ligase complex;8.04984968170691e-05!GO:0032940;secretion by cell;8.1473020467599e-05!GO:0031072;heat shock protein binding;8.35284273730066e-05!GO:0051056;regulation of small GTPase mediated signal transduction;8.92980916706612e-05!GO:0016567;protein ubiquitination;8.96066193280383e-05!GO:0000323;lytic vacuole;9.54127621914802e-05!GO:0005764;lysosome;9.54127621914802e-05!GO:0005793;ER-Golgi intermediate compartment;0.000100792250217161!GO:0051170;nuclear import;0.000108093719198659!GO:0006732;coenzyme metabolic process;0.000112963087155356!GO:0006606;protein import into nucleus;0.000116516313556084!GO:0051726;regulation of cell cycle;0.000116606522958652!GO:0000139;Golgi membrane;0.0001170908666331!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000121627945770166!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000121627945770166!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000124558938420755!GO:0009260;ribonucleotide biosynthetic process;0.000125439987438712!GO:0009142;nucleoside triphosphate biosynthetic process;0.000127542202373023!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000127542202373023!GO:0016481;negative regulation of transcription;0.000139711134103518!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000146915153087804!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000149314452898323!GO:0006888;ER to Golgi vesicle-mediated transport;0.000151928393468005!GO:0009109;coenzyme catabolic process;0.00016337806178129!GO:0005789;endoplasmic reticulum membrane;0.00016337806178129!GO:0005874;microtubule;0.000163850924807806!GO:0043566;structure-specific DNA binding;0.000164699273027561!GO:0000074;regulation of progression through cell cycle;0.000169136442835011!GO:0006613;cotranslational protein targeting to membrane;0.000171151567985285!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000173618630111464!GO:0009966;regulation of signal transduction;0.000186670028931272!GO:0051028;mRNA transport;0.000187222154566543!GO:0031901;early endosome membrane;0.000199828764782509!GO:0031324;negative regulation of cellular metabolic process;0.000227964290191804!GO:0051276;chromosome organization and biogenesis;0.000230039845770461!GO:0051187;cofactor catabolic process;0.00023392603885833!GO:0006084;acetyl-CoA metabolic process;0.00024019086882863!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000269851272693704!GO:0004721;phosphoprotein phosphatase activity;0.000278326771222089!GO:0030120;vesicle coat;0.000284592976524639!GO:0030662;coated vesicle membrane;0.000284592976524639!GO:0000159;protein phosphatase type 2A complex;0.000288476296763577!GO:0016197;endosome transport;0.000313650552336748!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000321473247821561!GO:0008026;ATP-dependent helicase activity;0.000353125622805483!GO:0006810;transport;0.000365667637573692!GO:0043069;negative regulation of programmed cell death;0.00036989035053497!GO:0005085;guanyl-nucleotide exchange factor activity;0.000412233411488458!GO:0006916;anti-apoptosis;0.000412233411488458!GO:0043066;negative regulation of apoptosis;0.000415519389826253!GO:0030532;small nuclear ribonucleoprotein complex;0.000435687307464542!GO:0030867;rough endoplasmic reticulum membrane;0.000439026262966733!GO:0004386;helicase activity;0.000465965391207211!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00046823184828619!GO:0015399;primary active transmembrane transporter activity;0.00046823184828619!GO:0051188;cofactor biosynthetic process;0.000539991931863994!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00056890697141373!GO:0003724;RNA helicase activity;0.000581756409025301!GO:0005798;Golgi-associated vesicle;0.000630368859269361!GO:0006402;mRNA catabolic process;0.000666874641664451!GO:0016311;dephosphorylation;0.000686439847327563!GO:0016791;phosphoric monoester hydrolase activity;0.000688769800895043!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000752914393420383!GO:0004812;aminoacyl-tRNA ligase activity;0.000752914393420383!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000752914393420383!GO:0045892;negative regulation of transcription, DNA-dependent;0.000777728277141928!GO:0042802;identical protein binding;0.00078898453390588!GO:0003697;single-stranded DNA binding;0.000794541233264428!GO:0048468;cell development;0.00083659195091369!GO:0030133;transport vesicle;0.000842587397809146!GO:0008601;protein phosphatase type 2A regulator activity;0.000877759309179513!GO:0043492;ATPase activity, coupled to movement of substances;0.00088620994735708!GO:0003729;mRNA binding;0.00095573581091904!GO:0003713;transcription coactivator activity;0.000959569118690183!GO:0005791;rough endoplasmic reticulum;0.000982723803462457!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00102903707386867!GO:0005839;proteasome core complex (sensu Eukaryota);0.00103310401089017!GO:0019222;regulation of metabolic process;0.00119313260365292!GO:0008286;insulin receptor signaling pathway;0.00120788882732945!GO:0043623;cellular protein complex assembly;0.00127009528230134!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00128122325697234!GO:0019902;phosphatase binding;0.00128122325697234!GO:0043038;amino acid activation;0.00132990318200413!GO:0006418;tRNA aminoacylation for protein translation;0.00132990318200413!GO:0043039;tRNA aminoacylation;0.00132990318200413!GO:0007019;microtubule depolymerization;0.00133545736328519!GO:0008654;phospholipid biosynthetic process;0.00138431182916385!GO:0019208;phosphatase regulator activity;0.00140445336104687!GO:0006607;NLS-bearing substrate import into nucleus;0.00141879669352543!GO:0006974;response to DNA damage stimulus;0.00145470027372028!GO:0000902;cell morphogenesis;0.00152389535957786!GO:0032989;cellular structure morphogenesis;0.00152389535957786!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00154451349668281!GO:0006612;protein targeting to membrane;0.00157135485152239!GO:0046578;regulation of Ras protein signal transduction;0.00158319152150678!GO:0022890;inorganic cation transmembrane transporter activity;0.00160040397716898!GO:0005938;cell cortex;0.00165628048057308!GO:0005099;Ras GTPase activator activity;0.00166344145042357!GO:0019717;synaptosome;0.00166344145042357!GO:0022406;membrane docking;0.00175626782398841!GO:0048278;vesicle docking;0.00175626782398841!GO:0006470;protein amino acid dephosphorylation;0.00178987188754879!GO:0042254;ribosome biogenesis and assembly;0.00178987188754879!GO:0005741;mitochondrial outer membrane;0.00187052028846645!GO:0051179;localization;0.00193908364552555!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0019789799918299!GO:0005100;Rho GTPase activator activity;0.00200268230707062!GO:0031902;late endosome membrane;0.00201599316368259!GO:0043209;myelin sheath;0.00203813924234641!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00208179204152072!GO:0065002;intracellular protein transport across a membrane;0.00214825115012244!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00222754479459624!GO:0051087;chaperone binding;0.00235407481954336!GO:0007266;Rho protein signal transduction;0.00235407481954336!GO:0030135;coated vesicle;0.00240480550393632!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00240480550393632!GO:0031968;organelle outer membrane;0.00243852477451416!GO:0019867;outer membrane;0.00245266785442242!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00248162560464007!GO:0046930;pore complex;0.00250731726336832!GO:0007243;protein kinase cascade;0.00256640058118288!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00259799143591551!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00260547672599811!GO:0005813;centrosome;0.00262658312669115!GO:0006904;vesicle docking during exocytosis;0.00268242445104972!GO:0008154;actin polymerization and/or depolymerization;0.00269846931331112!GO:0006401;RNA catabolic process;0.00271697715652904!GO:0006650;glycerophospholipid metabolic process;0.00275273764373903!GO:0008361;regulation of cell size;0.00276542554144525!GO:0004722;protein serine/threonine phosphatase activity;0.00291732508275833!GO:0022402;cell cycle process;0.00303035669628361!GO:0007272;ensheathment of neurons;0.00322771622293902!GO:0008366;axon ensheathment;0.00322771622293902!GO:0016363;nuclear matrix;0.00322884849650237!GO:0005885;Arp2/3 protein complex;0.00328787021088123!GO:0051168;nuclear export;0.0035332587037868!GO:0051789;response to protein stimulus;0.00364882056798702!GO:0006986;response to unfolded protein;0.00364882056798702!GO:0031114;regulation of microtubule depolymerization;0.00387069468460935!GO:0007026;negative regulation of microtubule depolymerization;0.00387069468460935!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00406272966234046!GO:0019904;protein domain specific binding;0.00407847552694409!GO:0009108;coenzyme biosynthetic process;0.00407847552694409!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00412953265603901!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00412953265603901!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00412953265603901!GO:0043087;regulation of GTPase activity;0.00416244381822481!GO:0005875;microtubule associated complex;0.00444351822302839!GO:0046467;membrane lipid biosynthetic process;0.00452770127413218!GO:0004298;threonine endopeptidase activity;0.00455361950735165!GO:0008139;nuclear localization sequence binding;0.00460954407967079!GO:0048487;beta-tubulin binding;0.00464572544236941!GO:0005667;transcription factor complex;0.004670053355934!GO:0019888;protein phosphatase regulator activity;0.0049195967563238!GO:0005815;microtubule organizing center;0.00492218615775777!GO:0006752;group transfer coenzyme metabolic process;0.00506273472350115!GO:0030041;actin filament polymerization;0.00516011959866191!GO:0042981;regulation of apoptosis;0.00529271061980448!GO:0043067;regulation of programmed cell death;0.00551149773136698!GO:0008186;RNA-dependent ATPase activity;0.00577316461799133!GO:0051427;hormone receptor binding;0.00591996866156405!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0062045859210411!GO:0016049;cell growth;0.0062045859210411!GO:0050811;GABA receptor binding;0.00629792741461758!GO:0004674;protein serine/threonine kinase activity;0.00666929304944336!GO:0001508;regulation of action potential;0.00671687154568802!GO:0030118;clathrin coat;0.00673468791617834!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00688325663824287!GO:0004667;prostaglandin-D synthase activity;0.00688325663824287!GO:0050802;circadian sleep/wake cycle, sleep;0.00688325663824287!GO:0022410;circadian sleep/wake cycle process;0.00688325663824287!GO:0042749;regulation of circadian sleep/wake cycle;0.00688325663824287!GO:0043021;ribonucleoprotein binding;0.00688325663824287!GO:0051234;establishment of localization;0.00689920081053737!GO:0051920;peroxiredoxin activity;0.00704160163677888!GO:0016301;kinase activity;0.00753605316581956!GO:0003690;double-stranded DNA binding;0.00788506973964653!GO:0005774;vacuolar membrane;0.00842017103549634!GO:0048500;signal recognition particle;0.0087131924396677!GO:0006643;membrane lipid metabolic process;0.00917621193460978!GO:0007050;cell cycle arrest;0.00950969611096226!GO:0007034;vacuolar transport;0.00973205585645207!GO:0005048;signal sequence binding;0.0098365545420611!GO:0015980;energy derivation by oxidation of organic compounds;0.0100063120697291!GO:0019783;small conjugating protein-specific protease activity;0.0100354009747267!GO:0006414;translational elongation;0.0100460573378969!GO:0030742;GTP-dependent protein binding;0.0100751309383791!GO:0035257;nuclear hormone receptor binding;0.0101437501357979!GO:0006891;intra-Golgi vesicle-mediated transport;0.0109859790035101!GO:0007017;microtubule-based process;0.0112684053173205!GO:0000059;protein import into nucleus, docking;0.0113299579834877!GO:0051261;protein depolymerization;0.0113299579834877!GO:0043488;regulation of mRNA stability;0.0113299579834877!GO:0043487;regulation of RNA stability;0.0113299579834877!GO:0016740;transferase activity;0.0115427320157782!GO:0001666;response to hypoxia;0.011803101669199!GO:0035035;histone acetyltransferase binding;0.0118775552961263!GO:0044448;cell cortex part;0.0119475279968748!GO:0004843;ubiquitin-specific protease activity;0.0119475279968748!GO:0005765;lysosomal membrane;0.0128434069462318!GO:0016050;vesicle organization and biogenesis;0.012848639540605!GO:0048154;S100 beta binding;0.0135221423672704!GO:0033673;negative regulation of kinase activity;0.0138838912537772!GO:0006469;negative regulation of protein kinase activity;0.0138838912537772!GO:0006281;DNA repair;0.0139771912313802!GO:0051539;4 iron, 4 sulfur cluster binding;0.0147915010358701!GO:0004004;ATP-dependent RNA helicase activity;0.0149486787802424!GO:0000118;histone deacetylase complex;0.0149624463138989!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0156774584247465!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0161069816174052!GO:0009117;nucleotide metabolic process;0.0161923566111344!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.016211815834473!GO:0006383;transcription from RNA polymerase III promoter;0.0170160229266604!GO:0006333;chromatin assembly or disassembly;0.0172083084186183!GO:0030384;phosphoinositide metabolic process;0.0176596547852585!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0179370504554514!GO:0031109;microtubule polymerization or depolymerization;0.0183453053198024!GO:0051252;regulation of RNA metabolic process;0.0183508866614261!GO:0042578;phosphoric ester hydrolase activity;0.0183508866614261!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0183508866614261!GO:0055083;monovalent inorganic anion homeostasis;0.0183508866614261!GO:0055064;chloride ion homeostasis;0.0183508866614261!GO:0030644;cellular chloride ion homeostasis;0.0183508866614261!GO:0017166;vinculin binding;0.0187213377090725!GO:0004221;ubiquitin thiolesterase activity;0.0188069804267566!GO:0006364;rRNA processing;0.0189803139066304!GO:0015629;actin cytoskeleton;0.0190993229701764!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0191371314291101!GO:0006399;tRNA metabolic process;0.0199500776235538!GO:0008022;protein C-terminus binding;0.0203973748975363!GO:0051348;negative regulation of transferase activity;0.0205887061414706!GO:0006338;chromatin remodeling;0.020663936982692!GO:0042026;protein refolding;0.020811776195513!GO:0005788;endoplasmic reticulum lumen;0.0216157412030495!GO:0030258;lipid modification;0.0216157412030495!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0217202682316091!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0217202682316091!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0219827273765905!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0223304119976001!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0229721546390712!GO:0030132;clathrin coat of coated pit;0.0230345077752652!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0240072349737535!GO:0045047;protein targeting to ER;0.0240072349737535!GO:0065009;regulation of a molecular function;0.0241877649581154!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.024377109078601!GO:0051540;metal cluster binding;0.024377109078601!GO:0051536;iron-sulfur cluster binding;0.024377109078601!GO:0016859;cis-trans isomerase activity;0.0246591102565795!GO:0043681;protein import into mitochondrion;0.025036153702347!GO:0019903;protein phosphatase binding;0.025036153702347!GO:0051287;NAD binding;0.0250730463229467!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0252151434091281!GO:0031124;mRNA 3'-end processing;0.025473710909338!GO:0044437;vacuolar part;0.0267361242217738!GO:0007005;mitochondrion organization and biogenesis;0.0271146934069208!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0271874481879116!GO:0033043;regulation of organelle organization and biogenesis;0.0271874481879116!GO:0005869;dynactin complex;0.0281773960416405!GO:0030880;RNA polymerase complex;0.0281773960416405!GO:0006376;mRNA splice site selection;0.0281773960416405!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0281773960416405!GO:0016072;rRNA metabolic process;0.0282267186347249!GO:0016563;transcription activator activity;0.0289082092991363!GO:0001887;selenium metabolic process;0.029231085656425!GO:0019911;structural constituent of myelin sheath;0.0296269186437536!GO:0050749;apolipoprotein E receptor binding;0.0304156625985375!GO:0003746;translation elongation factor activity;0.0310929148585878!GO:0008312;7S RNA binding;0.0319595060976892!GO:0003711;transcription elongation regulator activity;0.0325227946310516!GO:0030139;endocytic vesicle;0.0325883613487662!GO:0030658;transport vesicle membrane;0.0326978446884946!GO:0046983;protein dimerization activity;0.0337361161330524!GO:0032011;ARF protein signal transduction;0.0338862641474676!GO:0032012;regulation of ARF protein signal transduction;0.0338862641474676!GO:0042552;myelination;0.0346559631840219!GO:0050767;regulation of neurogenesis;0.0351726572814019!GO:0012506;vesicle membrane;0.035536121598779!GO:0003702;RNA polymerase II transcription factor activity;0.0367402944167087!GO:0046839;phospholipid dephosphorylation;0.0372428140746635!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0376072447041725!GO:0004155;6,7-dihydropteridine reductase activity;0.0376072447041725!GO:0051066;dihydrobiopterin metabolic process;0.0376072447041725!GO:0000062;acyl-CoA binding;0.0376268431573123!GO:0008610;lipid biosynthetic process;0.0376268431573123!GO:0007041;lysosomal transport;0.0376268431573123!GO:0032318;regulation of Ras GTPase activity;0.0377926477451237!GO:0006892;post-Golgi vesicle-mediated transport;0.0384838558417861!GO:0000314;organellar small ribosomal subunit;0.0384838558417861!GO:0005763;mitochondrial small ribosomal subunit;0.0384838558417861!GO:0046474;glycerophospholipid biosynthetic process;0.0387702980228694!GO:0001558;regulation of cell growth;0.0392621675573811!GO:0006665;sphingolipid metabolic process;0.0393527646217967!GO:0006378;mRNA polyadenylation;0.040255554799413!GO:0030660;Golgi-associated vesicle membrane;0.0412589607406027!GO:0007006;mitochondrial membrane organization and biogenesis;0.0413321698499238!GO:0051098;regulation of binding;0.0426368923516302!GO:0015682;ferric iron transport;0.0427799861902251!GO:0015091;ferric iron transmembrane transporter activity;0.0427799861902251!GO:0031643;positive regulation of myelination;0.0427799861902251!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0429339662350832!GO:0000209;protein polyubiquitination;0.0435499532705488!GO:0007399;nervous system development;0.0437754984987194!GO:0051020;GTPase binding;0.0441878302822489!GO:0031323;regulation of cellular metabolic process;0.0446860925511221!GO:0005092;GDP-dissociation inhibitor activity;0.0447584710204729!GO:0035258;steroid hormone receptor binding;0.0448205345478528!GO:0030911;TPR domain binding;0.0453906586540966!GO:0043284;biopolymer biosynthetic process;0.0457105804826602!GO:0046870;cadmium ion binding;0.0457208949241361!GO:0005868;cytoplasmic dynein complex;0.0457208949241361!GO:0006644;phospholipid metabolic process;0.0481591550109305!GO:0003725;double-stranded RNA binding;0.0481591550109305!GO:0016579;protein deubiquitination;0.0495084038964094!GO:0000287;magnesium ion binding;0.0495440204676556!GO:0003682;chromatin binding;0.0495440204676556 | |||
|sample_id=10161 | |sample_id=10161 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=globus pallidus | |sample_tissue=globus pallidus | ||
|top_motifs=SOX2:3.38863580268;SOX5:3.26175023398;SOX{8,9,10}:3.11365525012;NFIX:3.02826638466;GATA4:2.6578637826;FOXP1:2.65060709745;BPTF:2.40641834527;MYFfamily:2.36648273241;RREB1:2.34792829215;TOPORS:2.34085057846;AR:2.30918803502;ZFP161:2.28686887075;NHLH1,2:2.25483501794;MED-1{core}:2.24235502265;CUX2:2.22987306772;NKX3-2:2.1121614903;REST:2.09573780703;OCT4_SOX2{dimer}:2.06154132733;ATF2:2.03040423121;PATZ1:1.97895510935;PRDM1:1.90874649038;EP300:1.90040049033;GTF2I:1.89075311516;FOXD3:1.86838987527;MTF1:1.86176373749;TGIF1:1.82368012771;HIC1:1.81314028855;HBP1_HMGB_SSRP1_UBTF:1.80324486342;TFAP2B:1.78486276766;RFX2..5_RFXANK_RFXAP:1.76048628672;SOX17:1.75960432589;POU6F1:1.74257148537;EGR1..3:1.67161802721;ZBTB16:1.66119005166;XBP1:1.65225579847;DBP:1.62890744768;RBPJ:1.60600940673;FOX{I1,J2}:1.59969494193;PRRX1,2:1.57471246013;ZBTB6:1.55852130948;NKX6-1,2:1.54155992712;MTE{core}:1.53311326399;LMO2:1.53133773941;FOXO1,3,4:1.52823692258;MZF1:1.50188093012;FOXP3:1.49119364419;ZNF384:1.44675873963;STAT1,3:1.44535411228;NR3C1:1.44179289558;FOX{D1,D2}:1.41020133191;T:1.40649812434;MAZ:1.40172075434;ARID5B:1.3979182663;PAX6:1.38851032028;TLX2:1.35788057473;NANOG:1.33000563858;MYBL2:1.32146349377;PAX4:1.30761335041;CDC5L:1.29463176408;FOX{F1,F2,J1}:1.27760793285;STAT2,4,6:1.24073306072;ZNF143:1.23448915226;NRF1:1.22112914432;PDX1:1.19704485055;BREu{core}:1.18242322085;HOXA9_MEIS1:1.18217713272;SP1:1.18013183481;SMAD1..7,9:1.17317355871;FOXM1:1.13715319031;HOX{A6,A7,B6,B7}:1.12497626852;POU5F1:1.11906033319;MAFB:1.08729622025;IKZF2:1.08296444573;PAX5:1.07581185005;TFAP2{A,C}:1.06471830838;RFX1:1.05255966309;POU3F1..4:1.04374356523;KLF4:1.03312484425;PITX1..3:0.986741581352;AHR_ARNT_ARNT2:0.897755925189;SREBF1,2:0.891648402048;LEF1_TCF7_TCF7L1,2:0.847727157712;ONECUT1,2:0.740257838107;HOX{A4,D4}:0.695637131462;IRF7:0.678206865051;FOXQ1:0.657021285666;EBF1:0.644620146282;ZNF423:0.626437960986;TLX1..3_NFIC{dimer}:0.624914184203;JUN:0.606824323592;SPZ1:0.593570372961;TFDP1:0.573230045846;GTF2A1,2:0.500572295446;ALX1:0.458301721524;GFI1:0.453602807573;CREB1:0.445303477795;HAND1,2:0.410640086134;NKX2-2,8:0.407614602175;GFI1B:0.392504148089;GZF1:0.389728752757;HMGA1,2:0.3832869459;NFIL3:0.352345861483;NFY{A,B,C}:0.34577732692;POU1F1:0.290785303603;ZIC1..3:0.254751585579;GCM1,2:0.242027983458;IRF1,2:0.212768739446;CDX1,2,4:0.202627229578;CRX:0.161100594044;PBX1:0.124843418224;ADNP_IRX_SIX_ZHX:0.122837958098;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0838995873412;NFATC1..3:0.0838280297686;ZNF238:0.081381593371;NKX2-3_NKX2-5:0.0568987078565;TEF:0.0224622359739;PAX2:-0.00120292681994;FOXN1:-0.0225796078442;YY1:-0.0313239736787;HMX1:-0.0381739441351;FOXA2:-0.0432715858041;MEF2{A,B,C,D}:-0.0550449197141;RORA:-0.0573583782833;VSX1,2:-0.195608115712;SPI1:-0.198072853009;ATF5_CREB3:-0.219850381317;LHX3,4:-0.221394739147;HSF1,2:-0.252374694491;XCPE1{core}:-0.261431832707;MYOD1:-0.266495262944;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.26783642884;ETS1,2:-0.302914758788;ZEB1:-0.31682025285;TFCP2:-0.331998053637;AIRE:-0.338575861186;SPIB:-0.380948185239;UFEwm:-0.394634825587;CEBPA,B_DDIT3:-0.410057465884;IKZF1:-0.428002637207;NFE2L2:-0.441070239965;NR5A1,2:-0.452963590222;DMAP1_NCOR{1,2}_SMARC:-0.466952187012;HNF4A_NR2F1,2:-0.495397745185;NKX2-1,4:-0.505024699546;TBX4,5:-0.575188049063;ESRRA:-0.588699532677;RXR{A,B,G}:-0.591039603629;PAX1,9:-0.595345010158;FOXL1:-0.632296938729;bHLH_family:-0.634558765847;EVI1:-0.636427281812;GATA6:-0.640724453072;NFE2:-0.651617279239;ATF4:-0.687083415941;ELF1,2,4:-0.731386100504;ELK1,4_GABP{A,B1}:-0.732690890708;TFAP4:-0.73715498797;TP53:-0.780367988357;NKX3-1:-0.784204738282;NANOG{mouse}:-0.811703105649;ALX4:-0.846077385603;NFE2L1:-0.854436263454;HNF1A:-0.866333781899;TEAD1:-0.89269964287;SNAI1..3:-0.900692724312;E2F1..5:-0.919832872688;FOSL2:-0.9618255667;HIF1A:-0.96789673244;NR1H4:-0.976663333536;NFKB1_REL_RELA:-1.04278731373;FOS_FOS{B,L1}_JUN{B,D}:-1.07454896316;ATF6:-1.08060199898;HLF:-1.09275215251;RUNX1..3:-1.11343651797;PAX8:-1.12805984378;BACH2:-1.14527176013;PAX3,7:-1.1777961926;MYB:-1.20313722604;TBP:-1.25272808228;NR6A1:-1.27545290804;TAL1_TCF{3,4,12}:-1.32541886397;SRF:-1.35038205964;ZNF148:-1.38577492901;RXRA_VDR{dimer}:-1.42286201129;POU2F1..3:-1.43750122206;STAT5{A,B}:-1.46608243054;ESR1:-1.53636630097;HES1:-1.701134628;GLI1..3:-1.78444732548;EN1,2:-2.10145246423;PPARG:-2.65987123957;HOX{A5,B5}:-2.76279235883 | |top_motifs=SOX2:3.38863580268;SOX5:3.26175023398;SOX{8,9,10}:3.11365525012;NFIX:3.02826638466;GATA4:2.6578637826;FOXP1:2.65060709745;BPTF:2.40641834527;MYFfamily:2.36648273241;RREB1:2.34792829215;TOPORS:2.34085057846;AR:2.30918803502;ZFP161:2.28686887075;NHLH1,2:2.25483501794;MED-1{core}:2.24235502265;CUX2:2.22987306772;NKX3-2:2.1121614903;REST:2.09573780703;OCT4_SOX2{dimer}:2.06154132733;ATF2:2.03040423121;PATZ1:1.97895510935;PRDM1:1.90874649038;EP300:1.90040049033;GTF2I:1.89075311516;FOXD3:1.86838987527;MTF1:1.86176373749;TGIF1:1.82368012771;HIC1:1.81314028855;HBP1_HMGB_SSRP1_UBTF:1.80324486342;TFAP2B:1.78486276766;RFX2..5_RFXANK_RFXAP:1.76048628672;SOX17:1.75960432589;POU6F1:1.74257148537;EGR1..3:1.67161802721;ZBTB16:1.66119005166;XBP1:1.65225579847;DBP:1.62890744768;RBPJ:1.60600940673;FOX{I1,J2}:1.59969494193;PRRX1,2:1.57471246013;ZBTB6:1.55852130948;NKX6-1,2:1.54155992712;MTE{core}:1.53311326399;LMO2:1.53133773941;FOXO1,3,4:1.52823692258;MZF1:1.50188093012;FOXP3:1.49119364419;ZNF384:1.44675873963;STAT1,3:1.44535411228;NR3C1:1.44179289558;FOX{D1,D2}:1.41020133191;T:1.40649812434;MAZ:1.40172075434;ARID5B:1.3979182663;PAX6:1.38851032028;TLX2:1.35788057473;NANOG:1.33000563858;MYBL2:1.32146349377;PAX4:1.30761335041;CDC5L:1.29463176408;FOX{F1,F2,J1}:1.27760793285;STAT2,4,6:1.24073306072;ZNF143:1.23448915226;NRF1:1.22112914432;PDX1:1.19704485055;BREu{core}:1.18242322085;HOXA9_MEIS1:1.18217713272;SP1:1.18013183481;SMAD1..7,9:1.17317355871;FOXM1:1.13715319031;HOX{A6,A7,B6,B7}:1.12497626852;POU5F1:1.11906033319;MAFB:1.08729622025;IKZF2:1.08296444573;PAX5:1.07581185005;TFAP2{A,C}:1.06471830838;RFX1:1.05255966309;POU3F1..4:1.04374356523;KLF4:1.03312484425;PITX1..3:0.986741581352;AHR_ARNT_ARNT2:0.897755925189;SREBF1,2:0.891648402048;LEF1_TCF7_TCF7L1,2:0.847727157712;ONECUT1,2:0.740257838107;HOX{A4,D4}:0.695637131462;IRF7:0.678206865051;FOXQ1:0.657021285666;EBF1:0.644620146282;ZNF423:0.626437960986;TLX1..3_NFIC{dimer}:0.624914184203;JUN:0.606824323592;SPZ1:0.593570372961;TFDP1:0.573230045846;GTF2A1,2:0.500572295446;ALX1:0.458301721524;GFI1:0.453602807573;CREB1:0.445303477795;HAND1,2:0.410640086134;NKX2-2,8:0.407614602175;GFI1B:0.392504148089;GZF1:0.389728752757;HMGA1,2:0.3832869459;NFIL3:0.352345861483;NFY{A,B,C}:0.34577732692;POU1F1:0.290785303603;ZIC1..3:0.254751585579;GCM1,2:0.242027983458;IRF1,2:0.212768739446;CDX1,2,4:0.202627229578;CRX:0.161100594044;PBX1:0.124843418224;ADNP_IRX_SIX_ZHX:0.122837958098;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0838995873412;NFATC1..3:0.0838280297686;ZNF238:0.081381593371;NKX2-3_NKX2-5:0.0568987078565;TEF:0.0224622359739;PAX2:-0.00120292681994;FOXN1:-0.0225796078442;YY1:-0.0313239736787;HMX1:-0.0381739441351;FOXA2:-0.0432715858041;MEF2{A,B,C,D}:-0.0550449197141;RORA:-0.0573583782833;VSX1,2:-0.195608115712;SPI1:-0.198072853009;ATF5_CREB3:-0.219850381317;LHX3,4:-0.221394739147;HSF1,2:-0.252374694491;XCPE1{core}:-0.261431832707;MYOD1:-0.266495262944;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.26783642884;ETS1,2:-0.302914758788;ZEB1:-0.31682025285;TFCP2:-0.331998053637;AIRE:-0.338575861186;SPIB:-0.380948185239;UFEwm:-0.394634825587;CEBPA,B_DDIT3:-0.410057465884;IKZF1:-0.428002637207;NFE2L2:-0.441070239965;NR5A1,2:-0.452963590222;DMAP1_NCOR{1,2}_SMARC:-0.466952187012;HNF4A_NR2F1,2:-0.495397745185;NKX2-1,4:-0.505024699546;TBX4,5:-0.575188049063;ESRRA:-0.588699532677;RXR{A,B,G}:-0.591039603629;PAX1,9:-0.595345010158;FOXL1:-0.632296938729;bHLH_family:-0.634558765847;EVI1:-0.636427281812;GATA6:-0.640724453072;NFE2:-0.651617279239;ATF4:-0.687083415941;ELF1,2,4:-0.731386100504;ELK1,4_GABP{A,B1}:-0.732690890708;TFAP4:-0.73715498797;TP53:-0.780367988357;NKX3-1:-0.784204738282;NANOG{mouse}:-0.811703105649;ALX4:-0.846077385603;NFE2L1:-0.854436263454;HNF1A:-0.866333781899;TEAD1:-0.89269964287;SNAI1..3:-0.900692724312;E2F1..5:-0.919832872688;FOSL2:-0.9618255667;HIF1A:-0.96789673244;NR1H4:-0.976663333536;NFKB1_REL_RELA:-1.04278731373;FOS_FOS{B,L1}_JUN{B,D}:-1.07454896316;ATF6:-1.08060199898;HLF:-1.09275215251;RUNX1..3:-1.11343651797;PAX8:-1.12805984378;BACH2:-1.14527176013;PAX3,7:-1.1777961926;MYB:-1.20313722604;TBP:-1.25272808228;NR6A1:-1.27545290804;TAL1_TCF{3,4,12}:-1.32541886397;SRF:-1.35038205964;ZNF148:-1.38577492901;RXRA_VDR{dimer}:-1.42286201129;POU2F1..3:-1.43750122206;STAT5{A,B}:-1.46608243054;ESR1:-1.53636630097;HES1:-1.701134628;GLI1..3:-1.78444732548;EN1,2:-2.10145246423;PPARG:-2.65987123957;HOX{A5,B5}:-2.76279235883 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10161-103A8;search_select_hide=table117:FF:10161-103A8 | |||
}} | }} | ||
Latest revision as of 12:23, 3 June 2020
| Name: | globus pallidus, adult, donor10252 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12319 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12319
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12319
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0834 |
| 10 | 10 | 0.0661 |
| 100 | 100 | 0.53 |
| 101 | 101 | 0.438 |
| 102 | 102 | 0.998 |
| 103 | 103 | 0.0196 |
| 104 | 104 | 0.118 |
| 105 | 105 | 0.148 |
| 106 | 106 | 0.0188 |
| 107 | 107 | 0.13 |
| 108 | 108 | 0.977 |
| 109 | 109 | 0.00143 |
| 11 | 11 | 0.0113 |
| 110 | 110 | 0.0544 |
| 111 | 111 | 0.295 |
| 112 | 112 | 0.265 |
| 113 | 113 | 0.309 |
| 114 | 114 | 0.171 |
| 115 | 115 | 0.852 |
| 116 | 116 | 0.234 |
| 117 | 117 | 0.0164 |
| 118 | 118 | 0.281 |
| 119 | 119 | 0.391 |
| 12 | 12 | 0.521 |
| 120 | 120 | 0.188 |
| 121 | 121 | 0.433 |
| 122 | 122 | 0.911 |
| 123 | 123 | 0.16 |
| 124 | 124 | 0.522 |
| 125 | 125 | 0.64 |
| 126 | 126 | 0.0627 |
| 127 | 127 | 0.396 |
| 128 | 128 | 0.171 |
| 129 | 129 | 0.485 |
| 13 | 13 | 0.00519 |
| 130 | 130 | 0.252 |
| 131 | 131 | 0.0159 |
| 132 | 132 | 0.383 |
| 133 | 133 | 0.1 |
| 134 | 134 | 0.643 |
| 135 | 135 | 0.395 |
| 136 | 136 | 0.00197 |
| 137 | 137 | 0.874 |
| 138 | 138 | 0.806 |
| 139 | 139 | 0.39 |
| 14 | 14 | 0.931 |
| 140 | 140 | 0.61 |
| 141 | 141 | 0.461 |
| 142 | 142 | 0.389 |
| 143 | 143 | 0.0395 |
| 144 | 144 | 0.646 |
| 145 | 145 | 0.423 |
| 146 | 146 | 0.69 |
| 147 | 147 | 0.837 |
| 148 | 148 | 0.48 |
| 149 | 149 | 0.149 |
| 15 | 15 | 0.0708 |
| 150 | 150 | 0.104 |
| 151 | 151 | 0.825 |
| 152 | 152 | 0.0726 |
| 153 | 153 | 0.805 |
| 154 | 154 | 0.264 |
| 155 | 155 | 0.985 |
| 156 | 156 | 0.434 |
| 157 | 157 | 0.428 |
| 158 | 158 | 0.117 |
| 159 | 159 | 0.00517 |
| 16 | 16 | 0.0216 |
| 160 | 160 | 0.209 |
| 161 | 161 | 0.355 |
| 162 | 162 | 0.69 |
| 163 | 163 | 0.717 |
| 164 | 164 | 0.0207 |
| 165 | 165 | 0.176 |
| 166 | 166 | 0.991 |
| 167 | 167 | 0.805 |
| 168 | 168 | 0.675 |
| 169 | 169 | 0.0234 |
| 17 | 17 | 0.0924 |
| 18 | 18 | 0.0417 |
| 19 | 19 | 0.281 |
| 2 | 2 | 0.857 |
| 20 | 20 | 0.226 |
| 21 | 21 | 0.0646 |
| 22 | 22 | 0.225 |
| 23 | 23 | 0.347 |
| 24 | 24 | 0.0276 |
| 25 | 25 | 0.543 |
| 26 | 26 | 0.00706 |
| 27 | 27 | 0.363 |
| 28 | 28 | 0.882 |
| 29 | 29 | 0.00291 |
| 3 | 3 | 0.0687 |
| 30 | 30 | 0.755 |
| 31 | 31 | 0.893 |
| 32 | 32 | 0.00859 |
| 33 | 33 | 0.0587 |
| 34 | 34 | 0.677 |
| 35 | 35 | 0.54 |
| 36 | 36 | 0.321 |
| 37 | 37 | 0.0339 |
| 38 | 38 | 0.552 |
| 39 | 39 | 0.311 |
| 4 | 4 | 0.979 |
| 40 | 40 | 0.094 |
| 41 | 41 | 0.242 |
| 42 | 42 | 0.292 |
| 43 | 43 | 0.131 |
| 44 | 44 | 0.0593 |
| 45 | 45 | 0.642 |
| 46 | 46 | 0.04 |
| 47 | 47 | 0.113 |
| 48 | 48 | 0.0904 |
| 49 | 49 | 0.403 |
| 5 | 5 | 0.915 |
| 50 | 50 | 0.544 |
| 51 | 51 | 0.34 |
| 52 | 52 | 0.557 |
| 53 | 53 | 0.349 |
| 54 | 54 | 0.558 |
| 55 | 55 | 0.758 |
| 56 | 56 | 0.619 |
| 57 | 57 | 0.397 |
| 58 | 58 | 0.302 |
| 59 | 59 | 0.0455 |
| 6 | 6 | 0.615 |
| 60 | 60 | 0.0816 |
| 61 | 61 | 0.161 |
| 62 | 62 | 0.16 |
| 63 | 63 | 0.386 |
| 64 | 64 | 0.11 |
| 65 | 65 | 0.293 |
| 66 | 66 | 0.113 |
| 67 | 67 | 0.327 |
| 68 | 68 | 0.274 |
| 69 | 69 | 0.288 |
| 7 | 7 | 0.111 |
| 70 | 70 | 0.0674 |
| 71 | 71 | 0.00919 |
| 72 | 72 | 0.213 |
| 73 | 73 | 0.0289 |
| 74 | 74 | 0.879 |
| 75 | 75 | 0.0235 |
| 76 | 76 | 0.37 |
| 77 | 77 | 0.113 |
| 78 | 78 | 0.00344 |
| 79 | 79 | 0.3 |
| 8 | 8 | 0.0539 |
| 80 | 80 | 0.306 |
| 81 | 81 | 0.486 |
| 82 | 82 | 0.623 |
| 83 | 83 | 0.0505 |
| 84 | 84 | 0.579 |
| 85 | 85 | 0.409 |
| 86 | 86 | 0.198 |
| 87 | 87 | 1.33267e-4 |
| 88 | 88 | 0.627 |
| 89 | 89 | 0.121 |
| 9 | 9 | 0.314 |
| 90 | 90 | 0.08 |
| 91 | 91 | 0.86 |
| 92 | 92 | 0.375 |
| 93 | 93 | 0.765 |
| 94 | 94 | 0.155 |
| 95 | 95 | 0.0128 |
| 96 | 96 | 0.707 |
| 97 | 97 | 0.743 |
| 98 | 98 | 0.253 |
| 99 | 99 | 0.523 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12319
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010161 human globus pallidus - adult donor sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000479 (tissue)
0001875 (globus pallidus)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009663 (telencephalic nucleus)
0002420 (basal ganglion)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0000125 (neural nucleus)
0002020 (gray matter)
0007245 (nuclear complex of neuraxis)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0010009 (aggregate regional part of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0006514 (pallidum)
0010011 (collection of basal ganglia)
0000454 (cerebral subcortex)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010161 (human globus pallidus - adult donor sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
