FFCP PHASE1:Mm9::chr1:87802991..87803007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64294 | |EntrezGene=64294 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1759 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=255bp_to_ENSMUST00000139837_5end | |association_with_transcript=255bp_to_ENSMUST00000139837_5end | ||
|cluster_id=chr1:87802991..87803007,+ | |||
|description=CAGE_peak_2_at_Itm2c_5end | |description=CAGE_peak_2_at_Itm2c_5end | ||
|id=chr1:87802991..87803007,+ | |id=chr1:87802991..87803007,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.46e-09!50;CL:0000221!2.05e-07!44;CL:0000133!2.05e-07!44;CL:0002319!3.82e-07!43 | |ontology_enrichment_celltype=CL:0000055!3.46e-09!50;CL:0000221!2.05e-07!44;CL:0000133!2.05e-07!44;CL:0002319!3.82e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.98e-17,8;CL:0000333,2.81e-13,10;CL:0000095,2.81e-13,10;CL:0000243,2.81e-13,10;CL:0000123,2.81e-13,10;CL:0000125,2.81e-13,10;CL:0000030,2.81e-13,10;CL:0000339,2.81e-13,10;CL:0002321,5.86e-13,70;CL:0002319,8.56e-13,43;CL:0000221,2.09e-12,44;CL:0000133,2.09e-12,44;CL:0000128,2.66e-12,6;CL:0000126,2.66e-12,6;CL:0000127,2.66e-12,6;CL:0000393,1.75e-09,39;CL:0000211,1.75e-09,39;CL:0000680,6.04e-09,6;CL:0000187,6.04e-09,6;CL:0000056,6.04e-09,6;CL:0002092,2.38e-08,3;CL:0002540,2.38e-08,3;CL:0002614,4.32e-08,3;CL:0000723,5.68e-08,91;CL:0000048,5.68e-08,91;CL:0000222,1.29e-07,7;CL:0002494,2.28e-07,3;CL:0000737,2.28e-07,3;CL:0000746,2.28e-07,3;CL:0000513,2.28e-07,3;CL:0000034,3.73e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.98e-16!73;UBERON:0005743!4.98e-16!73;UBERON:0000073!6.27e-15!75;UBERON:0001016!6.27e-15!75;UBERON:0001049!3.32e-14!52;UBERON:0005068!3.32e-14!52;UBERON:0006241!3.32e-14!52;UBERON:0007135!3.32e-14!52;UBERON:0002346!1.82e-12!71;UBERON:0003075!1.82e-12!71;UBERON:0007284!1.82e-12!71;UBERON:0000955!2.42e-12!50;UBERON:0006238!2.42e-12!50;UBERON:0004121!4.14e-12!102;UBERON:0000924!4.14e-12!102;UBERON:0006601!4.14e-12!102;UBERON:0002616!4.34e-12!49;UBERON:0002020!1.39e-11!34;UBERON:0000033!1.10e-10!63;UBERON:0003080!4.56e-10!40;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0002791!3.40e-09!29;UBERON:0003528!3.40e-09!29;UBERON:0001893!3.40e-09!29;UBERON:0007811!2.52e-08!86;UBERON:0003056!6.11e-08!49;UBERON:0002021!6.47e-08!10;UBERON:0000411!6.47e-08!10;UBERON:0001950!6.47e-08!10;UBERON:0004111!1.15e-07!122;UBERON:0000153!3.42e-07!94;UBERON:0002619!6.64e-07!17;UBERON:0000956!9.44e-07!21;UBERON:0001869!9.44e-07!21;UBERON:0000203!9.44e-07!21;UBERON:0000025!9.87e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!4.98e-16!73;UBERON:0005743!4.98e-16!73;UBERON:0000073!6.27e-15!75;UBERON:0001016!6.27e-15!75;UBERON:0001049!3.32e-14!52;UBERON:0005068!3.32e-14!52;UBERON:0006241!3.32e-14!52;UBERON:0007135!3.32e-14!52;UBERON:0002346!1.82e-12!71;UBERON:0003075!1.82e-12!71;UBERON:0007284!1.82e-12!71;UBERON:0000955!2.42e-12!50;UBERON:0006238!2.42e-12!50;UBERON:0004121!4.14e-12!102;UBERON:0000924!4.14e-12!102;UBERON:0006601!4.14e-12!102;UBERON:0002616!4.34e-12!49;UBERON:0002020!1.39e-11!34;UBERON:0000033!1.10e-10!63;UBERON:0003080!4.56e-10!40;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0002791!3.40e-09!29;UBERON:0003528!3.40e-09!29;UBERON:0001893!3.40e-09!29;UBERON:0007811!2.52e-08!86;UBERON:0003056!6.11e-08!49;UBERON:0002021!6.47e-08!10;UBERON:0000411!6.47e-08!10;UBERON:0001950!6.47e-08!10;UBERON:0004111!1.15e-07!122;UBERON:0000153!3.42e-07!94;UBERON:0002619!6.64e-07!17;UBERON:0000956!9.44e-07!21;UBERON:0001869!9.44e-07!21;UBERON:0000203!9.44e-07!21;UBERON:0000025!9.87e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.35e-20,10;UBERON:0000411,1.35e-20,10;UBERON:0001950,1.35e-20,10;UBERON:0001017,7.93e-18,73;UBERON:0001016,3.56e-17,75;UBERON:0002619,1.83e-16,17;UBERON:0002020,2.66e-15,34;UBERON:0003528,2.48e-14,29;UBERON:0002791,2.48e-14,29;UBERON:0001893,2.48e-14,29;UBERON:0000073,2.04e-13,54;UBERON:0000956,8.04e-13,21;UBERON:0001869,8.04e-13,21;UBERON:0000203,8.04e-13,21;UBERON:0004121,3.55e-12,95;UBERON:0000924,3.55e-12,95;UBERON:0006601,3.55e-12,95;UBERON:0001049,4.24e-11,52;UBERON:0005068,4.24e-11,52;UBERON:0006241,4.24e-11,52;UBERON:0007135,4.24e-11,52;UBERON:0002616,3.13e-10,46;UBERON:0000955,6.26e-10,47;UBERON:0006238,6.26e-10,47;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.98e-09,40;UBERON:0002346,3.38e-08,64;UBERON:0003075,3.38e-08,64;UBERON:0007284,3.38e-08,64;UBERON:0002038,4.32e-08,3;UBERON:0009663,4.32e-08,3;UBERON:0009661,4.32e-08,3;UBERON:0000125,4.32e-08,3;UBERON:0002308,4.32e-08,3;UBERON:0003056,4.38e-07,49 | |||
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| ||
|short_description=p2@Itm2c | |short_description=p2@Itm2c | ||
}} | }} |
Latest revision as of 17:21, 1 October 2015
Short description: | p2@Itm2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Itm2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1759 |
Association with transcript: | 255bp_to_ENSMUST00000139837_5end |
EntrezGene: | Itm2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.98e-17 | 8 |
migratory neural crest cell | 2.81e-13 | 10 |
neuron associated cell | 2.81e-13 | 10 |
glial cell (sensu Vertebrata) | 2.81e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 2.81e-13 | 10 |
glial cell | 2.81e-13 | 10 |
glioblast | 2.81e-13 | 10 |
glioblast (sensu Vertebrata) | 2.81e-13 | 10 |
embryonic cell | 5.86e-13 | 70 |
neural cell | 8.56e-13 | 43 |
ectodermal cell | 2.09e-12 | 44 |
neurectodermal cell | 2.09e-12 | 44 |
oligodendrocyte | 2.66e-12 | 6 |
macroglial cell | 2.66e-12 | 6 |
astrocyte | 2.66e-12 | 6 |
electrically responsive cell | 1.75e-09 | 39 |
electrically active cell | 1.75e-09 | 39 |
muscle precursor cell | 6.04e-09 | 6 |
muscle cell | 6.04e-09 | 6 |
myoblast | 6.04e-09 | 6 |
bone marrow cell | 2.38e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.38e-08 | 3 |
neuron of the substantia nigra | 4.32e-08 | 3 |
somatic stem cell | 5.68e-08 | 91 |
multi fate stem cell | 5.68e-08 | 91 |
mesodermal cell | 1.29e-07 | 7 |
cardiocyte | 2.28e-07 | 3 |
striated muscle cell | 2.28e-07 | 3 |
cardiac muscle cell | 2.28e-07 | 3 |
cardiac muscle myoblast | 2.28e-07 | 3 |
stem cell | 3.73e-07 | 97 |