FFCP PHASE1:Hg19::chr10:116853091..116853131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26033 | |EntrezGene=26033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29063 | |HGNC=29063 | ||
|TSSclassifier=strong | |||
|UniProt=F5H129,E9PL90,Q5VV63 | |UniProt=F5H129,E9PL90,Q5VV63 | ||
|association_with_transcript=0bp_to_ENST00000485327,ENST00000526946,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | |association_with_transcript=0bp_to_ENST00000485327,ENST00000526946,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | ||
|cluster_id=chr10:116853091..116853131,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ATRNL1_5end | |description=CAGE_peak_1_at_ATRNL1_5end | ||
|id=chr10:116853091..116853131,+ | |id=chr10:116853091..116853131,+ | ||
|ontology_enrichment_celltype=CL:0000133!5.44e-08!59 | |ontology_enrichment_celltype=CL:0000133!5.44e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000147;6.45e-08;14!CL:0000540;5.62e-07;6!CL:0000404;5.62e-07;6!CL:0002321;9.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,4.37e-08,14;CL:0000148,5.44e-07,10;CL:0000541,5.44e-07,10;CL:0000540,6.79e-07,6;CL:0000031,6.79e-07,6;CL:0000404,6.79e-07,6;CL:0000133,8.25e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-12;82!CL:0000031;5.62e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.24e-46!86;UBERON:0000073!8.81e-46!94;UBERON:0001016!8.81e-46!94;UBERON:0001017!3.45e-44!82;UBERON:0000955!3.63e-37!69;UBERON:0006238!3.63e-37!69;UBERON:0002346!6.94e-37!90;UBERON:0003075!1.24e-36!86;UBERON:0007284!1.24e-36!86;UBERON:0002616!2.89e-36!59;UBERON:0001049!4.47e-36!57;UBERON:0005068!4.47e-36!57;UBERON:0006241!4.47e-36!57;UBERON:0007135!4.47e-36!57;UBERON:0000924!1.61e-35!173;UBERON:0006601!1.61e-35!173;UBERON:0004121!6.94e-35!169;UBERON:0002780!8.28e-30!41;UBERON:0001890!8.28e-30!41;UBERON:0006240!8.28e-30!41;UBERON:0000033!1.84e-29!123;UBERON:0003056!4.61e-29!61;UBERON:0003080!1.40e-28!42;UBERON:0000153!3.98e-28!129;UBERON:0007811!3.98e-28!129;UBERON:0007023!3.70e-26!115;UBERON:0001893!7.42e-25!34;UBERON:0002020!9.80e-25!34;UBERON:0003528!9.80e-25!34;UBERON:0001869!4.06e-24!32;UBERON:0002791!5.17e-24!33;UBERON:0000956!2.65e-19!25;UBERON:0000203!2.65e-19!25;UBERON:0002619!3.08e-19!22;UBERON:0001950!6.99e-18!20;UBERON:0000064!2.06e-11!219;UBERON:0000481!7.35e-09!347;UBERON:0003076!1.28e-08!15;UBERON:0003057!1.28e-08!15;UBERON:0000119!1.25e-07!312;UBERON:0001871!1.92e-07!7;UBERON:0000475!2.07e-07!365;UBERON:0004733!2.28e-07!12;UBERON:0002028!2.28e-07!12;UBERON:0007277!2.28e-07!12;UBERON:0000062!3.32e-07!511;UBERON:0002420!3.48e-07!9;UBERON:0007245!3.48e-07!9;UBERON:0010009!3.48e-07!9;UBERON:0010011!3.48e-07!9;UBERON:0000454!3.48e-07!9;UBERON:0000483!3.82e-07!309;UBERON:0000025!5.31e-07!194;UBERON:0002308!6.93e-07!9;UBERON:0000125!6.93e-07!9;UBERON:0000922!7.71e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-31;41!UBERON:0001890;2.16e-31;41!UBERON:0001869;3.78e-31;32!UBERON:0001893;8.11e-31;34!UBERON:0003528;9.60e-31;34!UBERON:0002020;9.60e-31;34!UBERON:0002791;1.52e-30;32!UBERON:0002619;8.49e-30;22!UBERON:0000073;1.69e-28;53!UBERON:0002616;1.69e-28;53!UBERON:0001950;1.18e-27;20!UBERON:0000956;2.99e-27;25!UBERON:0000203;2.99e-27;25!UBERON:0000955;5.16e-22;68!UBERON:0001017;1.05e-21;75!UBERON:0001016;2.95e-19;83!UBERON:0002420;1.65e-10;9!UBERON:0007245;1.65e-10;9!UBERON:0010009;1.65e-10;9!UBERON:0010011;1.65e-10;9!UBERON:0000454;1.65e-10;9!UBERON:0000125;4.32e-10;9!UBERON:0002308;4.32e-10;9!UBERON:0001871;9.26e-10;6!UBERON:0001894;3.13e-09;7!UBERON:0000200;3.24e-09;6!UBERON:0011216;7.79e-09;132!UBERON:0007023;8.83e-09;114!UBERON:0000922;2.38e-08;49!UBERON:0004733;3.46e-08;12!UBERON:0002028;3.46e-08;12!UBERON:0009663;3.55e-08;7!UBERON:0001872;4.87e-08;5!UBERON:0002021;6.52e-08;5!UBERON:0004732;2.29e-07;13!UBERON:0000349;2.47e-07;5!UBERON:0002298;4.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.52e-58,81;UBERON:0001016,2.91e-57,89;UBERON:0001049,3.36e-51,56;UBERON:0005068,3.36e-51,56;UBERON:0006241,3.36e-51,56;UBERON:0007135,3.36e-51,56;UBERON:0000955,5.52e-51,68;UBERON:0006238,5.52e-51,68;UBERON:0000073,1.47e-50,53;UBERON:0002616,1.47e-50,53;UBERON:0002780,4.96e-44,41;UBERON:0001890,4.96e-44,41;UBERON:0003080,4.96e-44,41;UBERON:0006240,4.96e-44,41;UBERON:0003075,1.71e-41,82;UBERON:0007284,1.71e-41,82;UBERON:0002346,2.80e-40,86;UBERON:0003056,1.25e-36,61;UBERON:0001893,3.94e-36,34;UBERON:0003528,6.05e-36,34;UBERON:0002020,6.05e-36,34;UBERON:0004121,4.00e-35,171;UBERON:0000924,4.00e-35,171;UBERON:0006601,4.00e-35,171;UBERON:0001869,6.41e-35,32;UBERON:0010371,1.64e-34,104;UBERON:0002791,5.29e-34,32;UBERON:0002619,9.36e-30,22;UBERON:0001950,1.38e-27,20;UBERON:0000956,3.07e-27,25;UBERON:0000203,3.07e-27,25;UBERON:0007023,8.84e-24,114;UBERON:0010314,1.85e-21,132;UBERON:0011216,6.08e-21,223;UBERON:0000025,3.55e-11,192;UBERON:0002420,1.58e-10,9;UBERON:0007245,1.58e-10,9;UBERON:0010009,1.58e-10,9;UBERON:0010011,1.58e-10,9;UBERON:0000454,1.58e-10,9;UBERON:0000125,4.70e-10,9;UBERON:0002308,4.70e-10,9;UBERON:0001871,9.87e-10,6;UBERON:0000200,3.41e-09,6;UBERON:0001894,3.46e-09,7;UBERON:0006222,3.46e-09,7;UBERON:0003076,6.14e-09,15;UBERON:0003057,6.14e-09,15;UBERON:0009663,3.46e-08,7;UBERON:0004733,4.16e-08,12;UBERON:0002028,4.16e-08,12;UBERON:0007277,4.16e-08,12;UBERON:0001872,4.95e-08,5;UBERON:0002021,6.94e-08,5;UBERON:0000349,2.28e-07,5;UBERON:0004732,2.70e-07,13;UBERON:0000922,3.68e-07,592;UBERON:0002298,4.10e-07,6;UBERON:0000483,5.91e-07,306 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.861847406537515,2.04000691244253,0.626909442956176,1.43117993565528,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0,0,0,0.954053754535364,0.569212969109448,0,2.29363936875137,0,0,0,0,0,0,0.83593247695339,0,0,0,1.11410456885174,0.294605907474837,0,0,0.384273959177026,1.04047478047903,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.945348171640679,0.443458794925128,1.31752178539689,6.54895377488563,0.364295288292542,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,1.21085942115945,1.15235184896,0.937285727335186,0,0,0,0.822041490506354,0.485618833104395,0.702254033511242,0.204154171254893,0.61417158655884,0,0,0,0,0,1.17835279767846,1.37630371859161,1.10825646193673,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,1.58565817968474,1.98794652482228,1.51052125730374,3.73179798055334,1.26160425437814,3.28479623168247,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,1.77236972004421,10.5951143859516,0,1.02940686179115,0,0,0,0,0.325808305310325,0,0,1.15930404975077,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,1.86595303986695,0.144119953416961,0,1.77794104018073,1.52795370223311,1.17217447210047,1.71072446022705,1.7480673759565,0,3.14409075893636,0.897048674762886,0.87192013766656,0.7333828582095,0,0,0,1.32969058292435,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,1.4377491329495,1.14861935834114,2.85273810081437,0.289562613335158,0,0.537182889719687,0,0,0,0,0.76228387266739,2.60279707715243,3.09315525111078,6.70065061337395,5.74144876487847,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0.184369168541703,0,1.37060810223918,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70719767744447,1.30926073077505,1.56869953835371,0,4.96092655796516,0,0.170093705276516,1.29549549661284,1.54227252690289,4.06419656315779,2.50844886927427,0.254876273045038,0.831076008928724,2.68649705666614,0.219259876645935,0,2.05160100093111,1.64007322849853,0.650756789328606,0.309123034943167,1.55668090191184,0.742585499285292,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,2.232950216158,0.949138274156178,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0.557409525377156,5.19369166715201,0,1.11598390910176,0,0,0,0,0,0,0,12.5317238545034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,14.9122147164945,6.33012373847307,0,0,0.844501632511974,3.58646378851925,0.276283915531148,5.2905877049398,1.53403023753232,0,0,0,0,0,0,0,0,17.4479894297139,10.2972588959655,15.9691038400955,0.260427761085233,0,0,0,0,0,12.7555048099342,3.2076507472158,5.03512485306548,4.42870692906919,7.71817207202611,3.05163472634166,1.3269511191747,3.54657142744257,13.8212800207003,0,0,0.461701551022782,1.36730467016401,0,0,0,0,0.915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0.865554558968364,0,0.707660516026713,1.22206028986725,0.889563386041866,0.123563938946503,0.313265848516366,2.08943512240099,0,7.02793337176017,0,0,0.485560759068186,1.18375320854817,2.41981432097328,18.0582929361989,0.63186579628488,2.70582154946087,1.34794648816421,0.664653872707185,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,2.25980740780532,0.274083849293502,0,17.9802660514696,0.391102765469606,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0.271808412147228,0.313808538937,0,0,4.80336230967832,1.9166753044879,0,0.859530882839914,0,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0.858452096273142,0,0.403100834920358,0,0,0,0,0,1.08270229666224,0,7.95229689809303,4.76711921390515,3.21506296930038,2.61324929534744,1.24632101408756,0,0,15.3088882778222,0,0.394028536495991,3.88163952198986,0.211200673038813,0,0,0,0,0,0.542999601753713,0,0.326587360109409,3.59190574687462,0.082092520749339,0.511164065356265,0.113312091520126,0.146552233678082,1.32506888912221,3.10279095267721,4.09921065402339,0,0,0,0.471612915298998,0,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,21.2656363192077,1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| ||
|short_description=p1@ATRNL1 | |short_description=p1@ATRNL1 | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p1@ATRNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATRNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000485327, ENST00000526946, ENST00000529665, NM_207303, uc001lce.2, uc001lcf.2, uc001lcg.2, uc009xyq.2_5end |
EntrezGene: | ATRNL1 |
HGNC: | 29063 |
UniProt: | F5H129E9PL90Q5VV63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 4.37e-08 | 14 |
melanocyte | 5.44e-07 | 10 |
melanoblast | 5.44e-07 | 10 |
neuron | 6.79e-07 | 6 |
neuroblast | 6.79e-07 | 6 |
electrically signaling cell | 6.79e-07 | 6 |
neurectodermal cell | 8.25e-07 | 59 |