Personal tools

FFCP PHASE1:Mm9::chr5:116358532..116358547,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12704
|EntrezGene=12704
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z1U0
|UniProt=D3Z1U0
|association_with_transcript=-99bp_to_uc008zes.1_5end
|association_with_transcript=-99bp_to_uc008zes.1_5end
|cluster_id=chr5:116358532..116358547,+
|description=CAGE_peak_4_at_Cit_5end
|description=CAGE_peak_4_at_Cit_5end
|id=chr5:116358532..116358547,+
|id=chr5:116358532..116358547,+
|ontology_enrichment_celltype=CL:0000117!5.44e-07!23;CL:0000337!5.44e-07!23
|ontology_enrichment_celltype=CL:0000117!5.44e-07!23;CL:0000337!5.44e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-14,23;CL:0000337,1.71e-14,23;CL:0000540,7.25e-09,33;CL:0000047,7.25e-09,33;CL:0000031,7.25e-09,33;CL:0000404,7.25e-09,33;CL:0000393,6.48e-07,39;CL:0000211,6.48e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.47e-12!63;UBERON:0002020!8.59e-12!34;UBERON:0001049!7.00e-11!52;UBERON:0005068!7.00e-11!52;UBERON:0006241!7.00e-11!52;UBERON:0007135!7.00e-11!52;UBERON:0001017!1.12e-10!73;UBERON:0005743!1.12e-10!73;UBERON:0002346!1.15e-10!71;UBERON:0003075!1.15e-10!71;UBERON:0007284!1.15e-10!71;UBERON:0000073!3.02e-10!75;UBERON:0001016!3.02e-10!75;UBERON:0000955!3.49e-10!50;UBERON:0006238!3.49e-10!50;UBERON:0002616!1.46e-09!49;UBERON:0003056!1.89e-09!49;UBERON:0002791!5.69e-09!29;UBERON:0003528!5.69e-09!29;UBERON:0001893!5.69e-09!29;UBERON:0002021!1.02e-08!10;UBERON:0000411!1.02e-08!10;UBERON:0001950!1.02e-08!10;UBERON:0004121!1.44e-08!102;UBERON:0000924!1.44e-08!102;UBERON:0006601!1.44e-08!102;UBERON:0000025!2.53e-07!114;UBERON:0003080!7.17e-07!40;UBERON:0004111!8.44e-07!122
|ontology_enrichment_uberon=UBERON:0000033!2.47e-12!63;UBERON:0002020!8.59e-12!34;UBERON:0001049!7.00e-11!52;UBERON:0005068!7.00e-11!52;UBERON:0006241!7.00e-11!52;UBERON:0007135!7.00e-11!52;UBERON:0001017!1.12e-10!73;UBERON:0005743!1.12e-10!73;UBERON:0002346!1.15e-10!71;UBERON:0003075!1.15e-10!71;UBERON:0007284!1.15e-10!71;UBERON:0000073!3.02e-10!75;UBERON:0001016!3.02e-10!75;UBERON:0000955!3.49e-10!50;UBERON:0006238!3.49e-10!50;UBERON:0002616!1.46e-09!49;UBERON:0003056!1.89e-09!49;UBERON:0002791!5.69e-09!29;UBERON:0003528!5.69e-09!29;UBERON:0001893!5.69e-09!29;UBERON:0002021!1.02e-08!10;UBERON:0000411!1.02e-08!10;UBERON:0001950!1.02e-08!10;UBERON:0004121!1.44e-08!102;UBERON:0000924!1.44e-08!102;UBERON:0006601!1.44e-08!102;UBERON:0000025!2.53e-07!114;UBERON:0003080!7.17e-07!40;UBERON:0004111!8.44e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-30,54;UBERON:0001017,7.94e-28,73;UBERON:0001049,3.37e-27,52;UBERON:0005068,3.37e-27,52;UBERON:0006241,3.37e-27,52;UBERON:0007135,3.37e-27,52;UBERON:0001016,8.43e-27,75;UBERON:0002020,5.40e-24,34;UBERON:0002346,3.15e-23,64;UBERON:0003075,3.15e-23,64;UBERON:0007284,3.15e-23,64;UBERON:0000955,2.69e-21,47;UBERON:0006238,2.69e-21,47;UBERON:0004121,2.87e-21,95;UBERON:0000924,2.87e-21,95;UBERON:0006601,2.87e-21,95;UBERON:0002616,7.24e-20,46;UBERON:0010371,3.36e-19,73;UBERON:0003528,1.07e-17,29;UBERON:0002791,1.07e-17,29;UBERON:0001893,1.07e-17,29;UBERON:0002021,1.27e-17,10;UBERON:0000411,1.27e-17,10;UBERON:0001950,1.27e-17,10;UBERON:0003080,1.97e-16,40;UBERON:0002780,3.15e-15,39;UBERON:0001890,3.15e-15,39;UBERON:0006240,3.15e-15,39;UBERON:0003056,1.06e-14,49;UBERON:0010314,2.51e-13,92;UBERON:0003076,4.17e-12,12;UBERON:0003057,4.17e-12,12;UBERON:0002619,3.24e-11,17;UBERON:0000025,1.18e-10,114;UBERON:0000956,2.45e-10,21;UBERON:0001869,2.45e-10,21;UBERON:0000203,2.45e-10,21;UBERON:0004111,3.48e-10,122;UBERON:0002240,1.42e-09,6;UBERON:0005174,1.42e-09,6;UBERON:0001137,1.42e-09,6;UBERON:0002420,3.40e-09,8;UBERON:0007245,3.40e-09,8;UBERON:0010009,3.40e-09,8;UBERON:0010011,3.40e-09,8;UBERON:0000454,3.40e-09,8;UBERON:0001948,4.02e-08,5;UBERON:0002315,4.02e-08,5;UBERON:0002950,4.75e-07,4;UBERON:0001891,4.75e-07,4;UBERON:0009616,4.75e-07,4;UBERON:0010286,4.75e-07,4;UBERON:0011216,9.12e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0,0,0,9.99778445413313,7.95126747425809,0.122490799214954,0.0958454710182364,0,18.7196997698961,41.3706975396008,29.7996674517112,2.1101806036831,2.01272815925301,0.52091337055676,7.81712397203867,6.75315132038016,7.79271063661732,3.53554302568401,9.681274294339,2.42319279572891,0,0.151143120213571,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,5.85561594023094,5.23616767033638,0,0,0,0,18.8736205650077,40.2600530480391,2.38743269014442,22.7709859451882,17.6443665557928,42.5965491347098,28.5544622999253,0,0.124406970610093,0,0.841767423545896,0.390361328888111,0.459804208866946,0.720248519221397,0.753524089178575,1.15662048557257,0.640568601424249,0.843315521037559,1.03481348295606,0,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,7.14985825118033,0.514523061896422,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.83422552858047,0.589676985339609,0.674586337154561,0.811440485554012,1.68824011826692,1.01850340712568,2.30156909960649,0,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0.757736633841335,0.179397413521912,0.482443521363367,0.369506380333209,0.568474235311454,0.488894929326078,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,12.6834966090356,11.9555920324047,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,47.5555548304274,0.141940085208269,0,0,0.494910368917606,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,15.0194494628513,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.674321731924103,0.661227645802687,0.26175594198403,0.777689839750757,0,0,0.448549638131936,0.66183396182839,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,9.46629010757733,0.375364950902364,0,0,0,24.8490810751509,23.9369122983732,23.4887160510153,26.4653900809279,21.9226406326606,21.9064230243013,26.3258775090404,23.8670237708837,21.2976932222576,15.5328093525546,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.838452650511929,0.919217542250071,0.888986911206461,1.44224540067226,0.962757628775446,1.01078884705519,0.25347929989024,1.13175804831646,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,0.927074607558844,0.964546102318525,4.12085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0.715308569841963,1.30811774969096,0.752875043322645,0.761531471025089,0.182927972872773,0.789209134313529,0.679020569229309,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.768436610643109,0,0,0,9.99778445413313,7.95126747425809,0.122490799214954,0.0958454710182364,0,18.7196997698961,41.3706975396008,29.7996674517112,2.1101806036831,2.01272815925301,0.52091337055676,7.81712397203867,6.75315132038016,7.79271063661732,3.53554302568401,9.681274294339,2.42319279572891,0,0.151143120213571,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,5.85561594023094,5.23616767033638,0,0,0,0,18.8736205650077,40.2600530480391,2.38743269014442,22.7709859451882,17.6443665557928,42.5965491347098,28.5544622999253,0,0.124406970610093,0,0.841767423545896,0.390361328888111,0.459804208866946,0.720248519221397,0.753524089178575,1.15662048557257,0.640568601424249,0.843315521037559,1.03481348295606,0,0,0.527853372491847,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,7.14985825118033,0.514523061896422,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0.83422552858047,0.589676985339609,0.674586337154561,0.811440485554012,1.68824011826692,1.01850340712568,2.30156909960649,0,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0.757736633841335,0.179397413521912,0.482443521363367,0.369506380333209,0.568474235311454,0.488894929326078,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,12.6834966090356,11.9555920324047,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,47.5555548304274,0.141940085208269,0,0,0.494910368917606,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,15.0194494628513,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.674321731924103,0.661227645802687,0.26175594198403,0.777689839750757,0,0,0.448549638131936,0.66183396182839,0.194451188344048,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,9.46629010757733,0.375364950902364,0,0,0,24.8490810751509,23.9369122983732,23.4887160510153,26.4653900809279,21.9226406326606,21.9064230243013,26.3258775090404,23.8670237708837,21.2976932222576,15.5328093525546,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.838452650511929,0.919217542250071,0.888986911206461,1.44224540067226,0.962757628775446,1.01078884705519,0.25347929989024,1.13175804831646,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,0.927074607558844,0.964546102318525,4.12085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0.715308569841963,1.30811774969096,0.752875043322645,0.761531471025089,0.182927972872773,0.789209134313529,0.679020569229309,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p4@Cit
|short_description=p4@Cit
}}
}}

Latest revision as of 17:50, 1 October 2015

Short description:p4@Cit
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cit_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -99bp_to_uc008zes.1_5end
EntrezGene:Cit
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cit

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D840.26
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D522.77
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F242.60
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.68
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I947.56
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.71e-1423
neuroblast (sensu Vertebrata)1.71e-1423
neuron7.25e-0933
neuronal stem cell7.25e-0933
neuroblast7.25e-0933
electrically signaling cell7.25e-0933
electrically responsive cell6.48e-0739
electrically active cell6.48e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.48e-3054
central nervous system7.94e-2873
neural tube3.37e-2752
neural rod3.37e-2752
future spinal cord3.37e-2752
neural keel3.37e-2752
nervous system8.43e-2775
gray matter5.40e-2434
neurectoderm3.15e-2364
neural plate3.15e-2364
presumptive neural plate3.15e-2364
brain2.69e-2147
future brain2.69e-2147
ectoderm-derived structure2.87e-2195
ectoderm2.87e-2195
presumptive ectoderm2.87e-2195
regional part of brain7.24e-2046
ecto-epithelium3.36e-1973
brain grey matter1.07e-1729
regional part of telencephalon1.07e-1729
telencephalon1.07e-1729
occipital lobe1.27e-1710
visual cortex1.27e-1710
neocortex1.27e-1710
anterior neural tube1.97e-1640
regional part of forebrain3.15e-1539
forebrain3.15e-1539
future forebrain3.15e-1539
pre-chordal neural plate1.06e-1449
structure with developmental contribution from neural crest2.51e-1392
posterior neural tube4.17e-1212
chordal neural plate4.17e-1212
regional part of cerebral cortex3.24e-1117
tube1.18e-10114
cerebral cortex2.45e-1021
cerebral hemisphere2.45e-1021
pallium2.45e-1021
anatomical conduit3.48e-10122
spinal cord1.42e-096
dorsal region element1.42e-096
dorsum1.42e-096
basal ganglion3.40e-098
nuclear complex of neuraxis3.40e-098
aggregate regional part of brain3.40e-098
collection of basal ganglia3.40e-098
cerebral subcortex3.40e-098
regional part of spinal cord4.02e-085
gray matter of spinal cord4.02e-085
regional part of midbrain4.75e-074
midbrain4.75e-074
presumptive midbrain4.75e-074
midbrain neural tube4.75e-074
organ system subdivision9.12e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:116358532..116358547,%2B&oldid=4314868"