FFCP PHASE1:Hg19::chr16:10276731..10276772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2903 | |EntrezGene=2903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4585 | |HGNC=4585 | ||
|TSSclassifier=strong | |||
|UniProt=Q12879,Q547U9 | |UniProt=Q12879,Q547U9 | ||
|association_with_transcript=-120bp_to_ENST00000396573,NM_000833,uc010uym.1_5end | |association_with_transcript=-120bp_to_ENST00000396573,NM_000833,uc010uym.1_5end | ||
|cluster_id=chr16:10276731..10276772,- | |||
|coexpression_cluster_id=C2359 | |||
|description=CAGE_peak_1_at_GRIN2A_5end | |description=CAGE_peak_1_at_GRIN2A_5end | ||
|id=chr16:10276731..10276772,- | |id=chr16:10276731..10276772,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.70e-13;3!UBERON:0006601;1.45e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.33e-47!115;UBERON:0001049!7.71e-46!57;UBERON:0005068!7.71e-46!57;UBERON:0006241!7.71e-46!57;UBERON:0007135!7.71e-46!57;UBERON:0001893!3.04e-38!34;UBERON:0001017!3.05e-38!82;UBERON:0002020!1.27e-37!34;UBERON:0003528!1.27e-37!34;UBERON:0002616!1.32e-37!59;UBERON:0005743!1.79e-37!86;UBERON:0002780!3.52e-37!41;UBERON:0001890!3.52e-37!41;UBERON:0006240!3.52e-37!41;UBERON:0000073!8.75e-37!94;UBERON:0001016!8.75e-37!94;UBERON:0002791!1.05e-36!33;UBERON:0003080!4.98e-36!42;UBERON:0001869!5.49e-36!32;UBERON:0000955!5.70e-35!69;UBERON:0006238!5.70e-35!69;UBERON:0003075!8.73e-33!86;UBERON:0007284!8.73e-33!86;UBERON:0002346!3.46e-32!90;UBERON:0002619!1.92e-31!22;UBERON:0001950!1.20e-28!20;UBERON:0000956!6.76e-27!25;UBERON:0000203!6.76e-27!25;UBERON:0003056!2.56e-24!61;UBERON:0000153!3.72e-22!129;UBERON:0007811!3.72e-22!129;UBERON:0000033!5.86e-21!123;UBERON:0000924!3.60e-19!173;UBERON:0006601!3.60e-19!173;UBERON:0004121!4.07e-19!169;UBERON:0001871!1.30e-12!7;UBERON:0002420!1.66e-12!9;UBERON:0007245!1.66e-12!9;UBERON:0010009!1.66e-12!9;UBERON:0010011!1.66e-12!9;UBERON:0000454!1.66e-12!9;UBERON:0002308!4.15e-12!9;UBERON:0000125!4.15e-12!9;UBERON:0003076!9.32e-11!15;UBERON:0003057!9.32e-11!15;UBERON:0000200!1.41e-10!6;UBERON:0009663!6.07e-10!7;UBERON:0002021!9.48e-09!5;UBERON:0000025!1.91e-08!194;UBERON:0000349!2.16e-08!5;UBERON:0004733!1.09e-07!12;UBERON:0002028!1.09e-07!12;UBERON:0007277!1.09e-07!12;UBERON:0004111!1.65e-07!241;UBERON:0004732!5.85e-07!13;UBERON:0000369!5.86e-07!4;UBERON:0002435!5.86e-07!4;UBERON:0000204!5.86e-07!4;UBERON:0010082!5.86e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.05e-57;22!UBERON:0001869;1.88e-51;32!UBERON:0001893;2.11e-50;34!UBERON:0001950;3.46e-50;20!UBERON:0000956;1.06e-49;25!UBERON:0000203;1.06e-49;25!UBERON:0002791;2.97e-46;32!UBERON:0003528;3.70e-46;34!UBERON:0002020;3.70e-46;34!UBERON:0002780;1.82e-39;41!UBERON:0001890;1.82e-39;41!UBERON:0000073;4.32e-33;53!UBERON:0002616;4.32e-33;53!UBERON:0001017;2.06e-23;75!UBERON:0000200;2.90e-23;6!UBERON:0000955;4.31e-23;68!UBERON:0001016;2.54e-17;83!UBERON:0001871;1.86e-13;6!UBERON:0001872;2.28e-13;5!UBERON:0002021;3.43e-13;5!UBERON:0007023;8.20e-13;114!UBERON:0001870;2.38e-12;3!UBERON:0000349;4.34e-12;5!UBERON:0004733;3.98e-11;12!UBERON:0002028;3.98e-11;12!UBERON:0004732;3.21e-10;13!UBERON:0002771;7.13e-09;2!UBERON:0011216;1.11e-08;132!UBERON:0002702;1.46e-08;2!UBERON:0001954;2.18e-08;2!UBERON:0003022;2.18e-08;2!UBERON:0002421;2.18e-08;2!UBERON:0002600;2.18e-08;2!UBERON:0002680;2.43e-07;9!UBERON:0001895;2.43e-07;9!UBERON:0002037;7.89e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.10e-66,56;UBERON:0005068,7.10e-66,56;UBERON:0006241,7.10e-66,56;UBERON:0007135,7.10e-66,56;UBERON:0000073,1.38e-65,53;UBERON:0002616,1.38e-65,53;UBERON:0001893,9.72e-58,34;UBERON:0002619,7.99e-57,22;UBERON:0001869,1.38e-56,32;UBERON:0000955,9.06e-56,68;UBERON:0006238,9.06e-56,68;UBERON:0002780,1.17e-55,41;UBERON:0001890,1.17e-55,41;UBERON:0003080,1.17e-55,41;UBERON:0006240,1.17e-55,41;UBERON:0003528,1.09e-52,34;UBERON:0002020,1.09e-52,34;UBERON:0001017,5.05e-52,81;UBERON:0002791,2.03e-51,32;UBERON:0001950,3.17e-50,20;UBERON:0000956,1.05e-49,25;UBERON:0000203,1.05e-49,25;UBERON:0001016,4.35e-46,89;UBERON:0002346,8.37e-46,86;UBERON:0003075,1.52e-45,82;UBERON:0007284,1.52e-45,82;UBERON:0003056,1.56e-38,61;UBERON:0007023,1.76e-35,114;UBERON:0010371,2.86e-34,104;UBERON:0010314,3.47e-27,132;UBERON:0000200,3.09e-23,6;UBERON:0004121,3.71e-23,171;UBERON:0000924,3.71e-23,171;UBERON:0006601,3.71e-23,171;UBERON:0011216,9.13e-16,223;UBERON:0000025,6.66e-15,192;UBERON:0001872,2.05e-13,5;UBERON:0001871,2.85e-13,6;UBERON:0002021,2.98e-13,5;UBERON:0001870,1.55e-12,3;UBERON:0000349,5.84e-12,5;UBERON:0003076,9.68e-12,15;UBERON:0003057,9.68e-12,15;UBERON:0004733,3.88e-11,12;UBERON:0002028,3.88e-11,12;UBERON:0007277,3.88e-11,12;UBERON:0004111,2.29e-10,240;UBERON:0004732,3.14e-10,13;UBERON:0002771,8.51e-09,2;UBERON:0002702,1.12e-08,2;UBERON:0001954,2.40e-08,2;UBERON:0003022,2.40e-08,2;UBERON:0002421,2.40e-08,2;UBERON:0002600,2.40e-08,2;UBERON:0002680,2.58e-07,9;UBERON:0001895,2.58e-07,9;UBERON:0010092,2.58e-07,9;UBERON:0000483,3.83e-07,306;UBERON:0000119,5.32e-07,309;UBERON:0002037,8.37e-07,6;UBERON:0006215,8.37e-07,6 | |||
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|short_description=p1@GRIN2A | |short_description=p1@GRIN2A | ||
}} | }} |
Latest revision as of 04:10, 20 September 2015
Short description: | p1@GRIN2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIN2A_5end |
Coexpression cluster: | C2359_cord_cerebellum_occipital_frontal_parietal_postcentral_brain |
Association with transcript: | -120bp_to_ENST00000396573, NM_000833, uc010uym.1_5end |
EntrezGene: | GRIN2A |
HGNC: | 4585 |
UniProt: | Q12879Q547U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data