FFCP PHASE1:Hg19::chr12:56389796..56389800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56389796..56389800,+ | |||
|description=CAGE_peak_at_chr12:56389796..56389800,+ | |description=CAGE_peak_at_chr12:56389796..56389800,+ | ||
|id=chr12:56389796..56389800,+ | |id=chr12:56389796..56389800,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002600;2.75e-16;2!CL:1000306;8.33e-09;4!CL:0002547;8.33e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.56e-16,2;CL:1000306,1.21e-08,4;CL:0002547,1.21e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.30e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.89e-22!57;UBERON:0005068!2.89e-22!57;UBERON:0006241!2.89e-22!57;UBERON:0007135!2.89e-22!57;UBERON:0007023!1.85e-21!115;UBERON:0002020!5.19e-20!34;UBERON:0003528!5.19e-20!34;UBERON:0002616!3.32e-19!59;UBERON:0002780!3.85e-19!41;UBERON:0001890!3.85e-19!41;UBERON:0006240!3.85e-19!41;UBERON:0003080!1.90e-18!42;UBERON:0001893!6.37e-18!34;UBERON:0001869!1.19e-17!32;UBERON:0000955!3.35e-17!69;UBERON:0006238!3.35e-17!69;UBERON:0002791!3.76e-17!33;UBERON:0001017!1.18e-16!82;UBERON:0005743!3.08e-15!86;UBERON:0003075!6.13e-15!86;UBERON:0007284!6.13e-15!86;UBERON:0002346!1.74e-14!90;UBERON:0000073!3.52e-14!94;UBERON:0001016!3.52e-14!94;UBERON:0003056!8.22e-13!61;UBERON:0002619!1.53e-12!22;UBERON:0000956!1.28e-11!25;UBERON:0000203!1.28e-11!25;UBERON:0002420!4.48e-11!9;UBERON:0007245!4.48e-11!9;UBERON:0010009!4.48e-11!9;UBERON:0010011!4.48e-11!9;UBERON:0000454!4.48e-11!9;UBERON:0002308!6.73e-11!9;UBERON:0000125!6.73e-11!9;UBERON:0001950!1.53e-10!20;UBERON:0000033!2.42e-09!123;UBERON:0000153!7.94e-09!129;UBERON:0007811!7.94e-09!129;UBERON:0009663!1.24e-08!7;UBERON:0000200!7.20e-08!6;UBERON:0004121!2.81e-07!169;UBERON:0000924!3.27e-07!173;UBERON:0006601!3.27e-07!173;UBERON:0000349!4.07e-07!5;UBERON:0000025!4.19e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;5.25e-14;9!UBERON:0007245;5.25e-14;9!UBERON:0010009;5.25e-14;9!UBERON:0010011;5.25e-14;9!UBERON:0000454;5.25e-14;9!UBERON:0000125;8.00e-14;9!UBERON:0002308;8.00e-14;9!UBERON:0003528;1.34e-10;34!UBERON:0002020;1.34e-10;34!UBERON:0009663;2.04e-10;7!UBERON:0002791;5.90e-10;32!UBERON:0002038;5.30e-09;1!UBERON:0000941;5.30e-09;1!UBERON:0001785;5.30e-09;1!UBERON:0002464;5.30e-09;1!UBERON:0004904;5.30e-09;1!UBERON:0001021;5.30e-09;1!UBERON:0009661;5.30e-09;1!UBERON:0002950;5.30e-09;1!UBERON:0001891;5.30e-09;1!UBERON:0004797;8.33e-09;4!UBERON:0000415;8.33e-09;4!UBERON:0007240;8.33e-09;4!UBERON:0005742;8.33e-09;4!UBERON:0005734;8.33e-09;4!UBERON:0004664;8.33e-09;4!UBERON:0004663;8.33e-09;4!UBERON:0002780;3.08e-08;41!UBERON:0001890;3.08e-08;41!UBERON:0001869;1.01e-07;32!UBERON:0001893;1.31e-07;34!UBERON:0000073;2.98e-07;53!UBERON:0002616;2.98e-07;53!UBERON:0000349;3.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.02e-14,9;UBERON:0007245,5.02e-14,9;UBERON:0010009,5.02e-14,9;UBERON:0010011,5.02e-14,9;UBERON:0000454,5.02e-14,9;UBERON:0000125,1.05e-13,9;UBERON:0002308,1.05e-13,9;UBERON:0003528,4.47e-13,34;UBERON:0002020,4.47e-13,34;UBERON:0001049,6.56e-12,56;UBERON:0005068,6.56e-12,56;UBERON:0006241,6.56e-12,56;UBERON:0007135,6.56e-12,56;UBERON:0003075,2.97e-11,82;UBERON:0007284,2.97e-11,82;UBERON:0002791,8.45e-11,32;UBERON:0002346,1.22e-10,86;UBERON:0009663,1.99e-10,7;UBERON:0000073,3.37e-10,53;UBERON:0002616,3.37e-10,53;UBERON:0001893,3.89e-10,34;UBERON:0010371,4.99e-10,104;UBERON:0001016,5.79e-10,89;UBERON:0001017,2.28e-09,81;UBERON:0000941,3.31e-09,1;UBERON:0001785,3.31e-09,1;UBERON:0002464,3.31e-09,1;UBERON:0004904,3.31e-09,1;UBERON:0001021,3.31e-09,1;UBERON:0003902,3.31e-09,1;UBERON:0005425,3.31e-09,1;UBERON:0002038,7.27e-09,1;UBERON:0009661,7.27e-09,1;UBERON:0002950,7.27e-09,1;UBERON:0001891,7.27e-09,1;UBERON:0009616,7.27e-09,1;UBERON:0010286,7.27e-09,1;UBERON:0003056,8.49e-09,61;UBERON:0000415,1.21e-08,4;UBERON:0007240,1.21e-08,4;UBERON:0005742,1.21e-08,4;UBERON:0005734,1.21e-08,4;UBERON:0004664,1.21e-08,4;UBERON:0004663,1.21e-08,4;UBERON:0002780,2.59e-08,41;UBERON:0001890,2.59e-08,41;UBERON:0003080,2.59e-08,41;UBERON:0006240,2.59e-08,41;UBERON:0001869,4.39e-08,32;UBERON:0007023,1.23e-07,114;UBERON:0000955,1.46e-07,68;UBERON:0006238,1.46e-07,68;UBERON:0000349,4.04e-07,5 | |||
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| ||
|short_description=p@chr12:56389796..56389800,+ | |short_description=p@chr12:56389796..56389800,+ | ||
}} | }} |
Latest revision as of 10:17, 24 July 2015
Short description: | p@chr12:56389796..56389800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56389796..56389800, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.56e-16 | 2 |
fibroblast of tunica adventitia of artery | 1.21e-08 | 4 |
fibroblast of the aortic adventitia | 1.21e-08 | 4 |