FFCP PHASE1:Hg19::chr11:31832658..31832681,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:31832658..31832681,-
|short_description=p1@PAX6
|description=CAGE_peak_1_at_PAX6_5end
|association_with_transcript=0bp_to_ENST00000527769_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000527769_5end | |||
|cluster_id=chr11:31832658..31832681,- | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_1_at_PAX6_5end | |||
|id=chr11:31832658..31832681,- | |||
|ontology_enrichment_celltype=CL:0002319!2.77e-09!25;CL:0000095!6.79e-08!17;CL:0000123!6.79e-08!17;CL:0000128!9.69e-07!7;CL:0000126!9.69e-07!7;CL:0000127!9.69e-07!7;CL:0002453!9.69e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;2.70e-08;7!CL:0000126;2.70e-08;7!CL:0000127;2.70e-08;7!CL:0002319;1.63e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.61e-08,7;CL:0000126,2.61e-08,7;CL:0000127,2.61e-08,7;CL:0002453,2.61e-08,7;CL:0002319,1.53e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.53e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.33e-14!143;DOID:305!2.35e-10!106;DOID:14566!8.97e-10!239;DOID:162!1.02e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.82e-12,143;DOID:305,2.60e-08,106;DOID:14566,8.35e-08,239;DOID:162,1.36e-07,235 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.77e-29;53!UBERON:0002616;2.77e-29;53!UBERON:0003528;3.61e-29;34!UBERON:0002020;3.61e-29;34!UBERON:0001893;3.72e-29;34!UBERON:0001869;4.10e-29;32!UBERON:0002791;4.44e-29;32!UBERON:0002780;1.27e-28;41!UBERON:0001890;1.27e-28;41!UBERON:0000956;2.98e-25;25!UBERON:0000203;2.98e-25;25!UBERON:0002619;5.80e-22;22!UBERON:0001017;3.05e-21;75!UBERON:0000955;1.51e-20;68!UBERON:0001950;8.72e-20;20!UBERON:0001016;5.67e-19;83!UBERON:0007625;7.96e-14;11!UBERON:0004733;2.14e-13;12!UBERON:0002028;2.14e-13;12!UBERON:0004732;4.59e-12;13!UBERON:0000970;5.46e-12;20!UBERON:0002104;3.58e-11;21!UBERON:0000019;4.94e-11;19!UBERON:0000047;4.94e-11;19!UBERON:0004088;4.94e-11;19!UBERON:0010230;4.94e-11;19!UBERON:0002680;3.02e-10;9!UBERON:0001895;3.02e-10;9!UBERON:0002420;6.22e-10;9!UBERON:0007245;6.22e-10;9!UBERON:0010009;6.22e-10;9!UBERON:0010011;6.22e-10;9!UBERON:0000454;6.22e-10;9!UBERON:0000020;9.18e-10;23!UBERON:0000125;1.04e-09;9!UBERON:0002308;1.04e-09;9!UBERON:0001456;1.54e-09;21!UBERON:0001032;3.75e-09;24!UBERON:0004456;3.75e-09;24!UBERON:0001801;4.49e-08;14!UBERON:0009663;5.47e-08;7!UBERON:0002037;7.04e-08;6!UBERON:0001871;8.94e-08;6!UBERON:0001894;1.04e-07;7!UBERON:0011216;1.57e-07;132!UBERON:0002298;3.75e-07;6!UBERON:0010314;6.84e-07;132 | |||
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| ||
|short_description=p1@PAX6 | |||
}} | }} |
Latest revision as of 14:58, 17 September 2015
Short description: | p1@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | 0bp_to_ENST00000527769_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.61e-08 | 7 |
macroglial cell | 2.61e-08 | 7 |
astrocyte | 2.61e-08 | 7 |
oligodendrocyte precursor cell | 2.61e-08 | 7 |
neural cell | 1.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.82e-12 | 143 |
carcinoma | 2.60e-08 | 106 |
disease of cellular proliferation | 8.35e-08 | 239 |
cancer | 1.36e-07 | 235 |