FFCP PHASE1:Hg19::chr1:234667080..234667084,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=312bp_to_AK095015_5end | |association_with_transcript=312bp_to_AK095015_5end | ||
|cluster_id=chr1:234667080..234667084,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_AK095015_5end | |description=CAGE_peak_1_at_AK095015_5end | ||
|id=chr1:234667080..234667084,+ | |id=chr1:234667080..234667084,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000569;1.16e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.77e-13,4;CL:0000011,1.77e-13,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.16e-13;4!UBERON:0005062;1.97e-08;4!UBERON:0007284;1.97e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-51!115;UBERON:0001049!2.77e-29!57;UBERON:0005068!2.77e-29!57;UBERON:0006241!2.77e-29!57;UBERON:0007135!2.77e-29!57;UBERON:0003080!3.36e-23!42;UBERON:0002616!5.81e-23!59;UBERON:0003075!9.78e-23!86;UBERON:0007284!9.78e-23!86;UBERON:0002780!4.15e-22!41;UBERON:0001890!4.15e-22!41;UBERON:0006240!4.15e-22!41;UBERON:0002346!5.20e-21!90;UBERON:0001017!3.53e-20!82;UBERON:0000955!8.88e-20!69;UBERON:0006238!8.88e-20!69;UBERON:0005743!1.54e-19!86;UBERON:0000073!3.33e-17!94;UBERON:0001016!3.33e-17!94;UBERON:0002020!6.78e-16!34;UBERON:0003528!6.78e-16!34;UBERON:0001893!8.97e-16!34;UBERON:0002791!5.21e-15!33;UBERON:0000025!2.37e-14!194;UBERON:0004111!3.75e-14!241;UBERON:0001869!9.81e-14!32;UBERON:0003056!9.94e-14!61;UBERON:0000033!2.78e-11!123;UBERON:0000153!3.14e-11!129;UBERON:0007811!3.14e-11!129;UBERON:0000477!3.50e-11!286;UBERON:0002298!7.31e-11!8;UBERON:0002619!2.58e-10!22;UBERON:0001950!6.01e-10!20;UBERON:0000475!6.04e-10!365;UBERON:0000956!1.20e-09!25;UBERON:0000203!1.20e-09!25;UBERON:0004121!3.16e-09!169;UBERON:0000924!1.13e-08!173;UBERON:0006601!1.13e-08!173;UBERON:0001894!1.60e-08!7;UBERON:0006222!1.60e-08!7;UBERON:0000062!1.65e-08!511;UBERON:0002308!2.19e-08!9;UBERON:0000125!2.19e-08!9;UBERON:0000468!6.59e-08!659;UBERON:0000467!7.07e-08!625;UBERON:0000483!7.36e-08!309;UBERON:0000480!8.35e-08!626;UBERON:0000119!1.37e-07!312;UBERON:0000481!1.78e-07!347;UBERON:0003076!2.70e-07!15;UBERON:0003057!2.70e-07!15;UBERON:0000479!3.55e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.01e-11;3!UBERON:0005290;4.01e-11;3!UBERON:0003978;4.15e-11;3!UBERON:0000946;4.15e-11;3!UBERON:0002298;1.26e-09;6!UBERON:0002780;3.41e-09;41!UBERON:0001890;3.41e-09;41!UBERON:0000073;3.83e-09;53!UBERON:0002616;3.83e-09;53!UBERON:0002133;2.91e-08;2!UBERON:0002784;2.95e-08;4!UBERON:0001897;5.12e-08;2!UBERON:0010225;5.12e-08;2!UBERON:0001894;7.37e-08;7!UBERON:0007023;3.59e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.16e-21,114;UBERON:0001049,6.07e-17,56;UBERON:0005068,6.07e-17,56;UBERON:0006241,6.07e-17,56;UBERON:0007135,6.07e-17,56;UBERON:0003075,6.99e-16,82;UBERON:0007284,6.99e-16,82;UBERON:0002346,6.91e-15,86;UBERON:0000073,3.61e-14,53;UBERON:0002616,3.61e-14,53;UBERON:0010314,5.03e-14,132;UBERON:0001017,1.69e-11,81;UBERON:0010371,2.28e-11,104;UBERON:0004111,3.09e-11,240;UBERON:0003978,4.24e-11,3;UBERON:0009751,4.24e-11,3;UBERON:0000946,4.24e-11,3;UBERON:0002523,4.24e-11,3;UBERON:0005983,4.24e-11,3;UBERON:0002165,4.24e-11,3;UBERON:0002062,4.24e-11,3;UBERON:0007280,4.24e-11,3;UBERON:0001896,5.03e-11,3;UBERON:0005290,5.03e-11,3;UBERON:0010096,5.03e-11,3;UBERON:0000025,5.18e-11,192;UBERON:0002780,8.31e-11,41;UBERON:0001890,8.31e-11,41;UBERON:0003080,8.31e-11,41;UBERON:0006240,8.31e-11,41;UBERON:0000955,5.25e-10,68;UBERON:0006238,5.25e-10,68;UBERON:0001016,6.56e-10,89;UBERON:0002298,1.48e-09,6;UBERON:0004797,2.84e-08,7;UBERON:0002133,3.49e-08,2;UBERON:0002784,3.57e-08,4;UBERON:0001897,4.16e-08,2;UBERON:0010225,4.16e-08,2;UBERON:0001894,7.12e-08,7;UBERON:0006222,7.12e-08,7;UBERON:0003076,8.71e-08,15;UBERON:0003057,8.71e-08,15;UBERON:0000948,1.27e-07,24;UBERON:0005498,1.27e-07,24;UBERON:0004140,1.27e-07,24;UBERON:0009881,1.27e-07,24;UBERON:0004141,1.27e-07,24;UBERON:0003084,1.27e-07,24;UBERON:0007005,1.27e-07,24;UBERON:0004139,1.27e-07,24;UBERON:0004291,1.27e-07,24;UBERON:0004121,8.28e-07,171;UBERON:0000924,8.28e-07,171;UBERON:0006601,8.28e-07,171 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76673050927588,0.860509862246441,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.900273288253207,0,0.257640540045629,0,1.5189869901714,0,0.504867548488229,0,0,1.42003837006646,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,2.91577749247319,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,1.48418066444991,0,1.9531789784444,0.0821271560138091,0,0.697262270759755,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,2.51849877464512,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0.66343897524122,0,0,1.9676842561399,0,0,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.71623345421307,0,0,0,3.09472716103128,0,0,0,3.38721580026819,1.93398740871803,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,13.2861207872076,0.361789315876224,0,0,0.295547618953547,2.19385397153973,0,0,0.538651809526579,0,0,0.0897576444097721,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,5.32468950547349,0,1.87411556580271,0,0,0,1.97292201424695,2.41981432097328,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,6.42349522926185,1.60412296808179,2.15361907373044,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,2.99647493445466,0,0,0,0,0,0.668245123238271,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10279095267721,0.92562821219883,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,35.9051750223853,32.589686222951,34.6170501742712,35.0823714859491,0,0,0.610131324509816,0.876336514945499,1.14681839138014,8.43060791680077,2.85643453530364,0,0,0,0,0,0,0,0.895528817321244,1.8697064787778,4.43844689202091,0,0.50313580350515,0,1.60188047877847,10.8886265109532,1.24349760466224,1.18284119991707,0.159296767163702,0,0.310525913752519,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.727394636810238,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.706521476061055,0,0.478901577171454,0.615349092722265,0,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0.261906694481422,0,0,0.472763092328763,0.781078098613847,2.06686796501184,0.760989722326882,0,0,1.48863353516788,0,0,1.07140367175657,0.336283722218824,0.606965604236632,0.227662191351298,0.266107110487916,0,0,0.611727596791485,0.328863867814245,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,2.76503864725637,0,0,0,11.0080633049642,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,2.35570160537934,2.0793248022896,0.4226557275834,0,0,0.322289439867886,0,0,0,0,1.46067277649303,0.458729283404541,1.86341458096887,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,2.48750831837634,2.89612388413307,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,1.81905470062397,0.217716747896961,1.36893320434112,0.0673520530145875,0.502055437748735,0.332660356546013,0,0,0,0,0,0.733448665097199,0,3.99454064511308,0.805095174364105,0 | |phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76673050927588,0.860509862246441,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.900273288253207,0,0.257640540045629,0,1.5189869901714,0,0.504867548488229,0,0,1.42003837006646,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,2.91577749247319,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,1.48418066444991,0,1.9531789784444,0.0821271560138091,0,0.697262270759755,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,2.51849877464512,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0.66343897524122,0,0,1.9676842561399,0,0,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.71623345421307,0,0,0,3.09472716103128,0,0,0,3.38721580026819,1.93398740871803,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0.649376687132959,0,0,0,2.17499872630438,0,0,0,0,0,0,13.2861207872076,0.361789315876224,0,0,0.295547618953547,2.19385397153973,0,0,0.538651809526579,0,0,0.0897576444097721,0,2.23300811812344,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,5.32468950547349,0,1.87411556580271,0,0,0,1.97292201424695,2.41981432097328,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,6.42349522926185,1.60412296808179,2.15361907373044,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,2.99647493445466,0,0,0,0,0,0.668245123238271,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10279095267721,0.92562821219883,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,35.9051750223853,32.589686222951,34.6170501742712,35.0823714859491,0,0,0.610131324509816,0.876336514945499,1.14681839138014,8.43060791680077,2.85643453530364,0,0,0,0,0,0,0,0.895528817321244,1.8697064787778,4.43844689202091,0,0.50313580350515,0,1.60188047877847,10.8886265109532,1.24349760466224,1.18284119991707,0.159296767163702,0,0.310525913752519,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.727394636810238,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.706521476061055,0,0.478901577171454,0.615349092722265,0,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0.261906694481422,0,0,0.472763092328763,0.781078098613847,2.06686796501184,0.760989722326882,0,0,1.48863353516788,0,0,1.07140367175657,0.336283722218824,0.606965604236632,0.227662191351298,0.266107110487916,0,0,0.611727596791485,0.328863867814245,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,2.76503864725637,0,0,0,11.0080633049642,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,2.35570160537934,2.0793248022896,0.4226557275834,0,0,0.322289439867886,0,0,0,0,1.46067277649303,0.458729283404541,1.86341458096887,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,2.48750831837634,2.89612388413307,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,1.81905470062397,0.217716747896961,1.36893320434112,0.0673520530145875,0.502055437748735,0.332660356546013,0,0,0,0,0,0.733448665097199,0,3.99454064511308,0.805095174364105,0 | ||
|short_description=p1@AK095015 | |short_description=p1@AK095015 | ||
}} | }} |
Latest revision as of 05:10, 28 July 2015
Short description: | p1@AK095015 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK095015_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 312bp_to_AK095015_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.77e-13 | 4 |
migratory trunk neural crest cell | 1.77e-13 | 4 |