FFCP PHASE1:Hg19::chr20:23615955..23616000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23615955..23616000,- | |||
|coexpression_cluster_id=C4018 | |||
|description=CAGE_peak_at_chr20:23615955..23616000,- | |description=CAGE_peak_at_chr20:23615955..23616000,- | ||
|id=chr20:23615955..23616000,- | |id=chr20:23615955..23616000,- | ||
|ontology_enrichment_celltype=CL:0002009!1.03e-19!65;CL:0002057!3.24e-19!42;CL:0002194!3.67e-19!63;CL:0000576!3.67e-19!63;CL:0000040!3.67e-19!63;CL:0000559!3.67e-19!63;CL:0000557!4.52e-17!71;CL:0000860!1.57e-16!45;CL:0000839!1.05e-15!70;CL:0000766!3.21e-14!76 | |ontology_enrichment_celltype=CL:0002009!1.03e-19!65;CL:0002057!3.24e-19!42;CL:0002194!3.67e-19!63;CL:0000576!3.67e-19!63;CL:0000040!3.67e-19!63;CL:0000559!3.67e-19!63;CL:0000557!4.52e-17!71;CL:0000860!1.57e-16!45;CL:0000839!1.05e-15!70;CL:0000766!3.21e-14!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.77e-18;33!CL:0002057;2.77e-18;33!CL:0000473;2.09e-17;39!CL:0000234;2.09e-17;39!CL:0000576;7.63e-14;48!CL:0000766;3.87e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.24e-24,61;CL:0000473,3.20e-24,48;CL:0000234,3.20e-24,48;CL:0002194,5.08e-24,59;CL:0000576,5.08e-24,59;CL:0000040,5.08e-24,59;CL:0000559,5.08e-24,59;CL:0000860,1.03e-21,42;CL:0002057,1.03e-21,42;CL:0000557,1.23e-21,67;CL:0000839,2.89e-20,66;CL:0000766,2.27e-18,72;CL:0000763,3.89e-07,108;CL:0000049,3.89e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.39e-23!659;UBERON:0007023!4.70e-22!115;UBERON:0000467!6.08e-21!625;UBERON:0000480!1.50e-20!626;UBERON:0002050!6.92e-20!605;UBERON:0005423!6.92e-20!605;UBERON:0000923!1.35e-19!604;UBERON:0005291!1.35e-19!604;UBERON:0006598!1.35e-19!604;UBERON:0002532!1.35e-19!604;UBERON:0000922!3.16e-19!612;UBERON:0000062!6.65e-18!511;UBERON:0002371!6.11e-16!80;UBERON:0002204!6.92e-15!167;UBERON:0001474!2.31e-14!86;UBERON:0004765!1.47e-13!101;UBERON:0001434!1.47e-13!101;UBERON:0002405!3.40e-13!115;UBERON:0000926!2.48e-11!448;UBERON:0004120!2.48e-11!448;UBERON:0006603!2.48e-11!448;UBERON:0002390!6.79e-11!102;UBERON:0003061!6.79e-11!102;UBERON:0003081!7.18e-11!216;UBERON:0002193!8.93e-11!112;UBERON:0001049!1.99e-10!57;UBERON:0005068!1.99e-10!57;UBERON:0006241!1.99e-10!57;UBERON:0007135!1.99e-10!57;UBERON:0003075!1.85e-08!86;UBERON:0007284!1.85e-08!86;UBERON:0002616!2.88e-08!59;UBERON:0003080!9.01e-08!42;UBERON:0002346!1.33e-07!90;UBERON:0002780!2.66e-07!41;UBERON:0001890!2.66e-07!41;UBERON:0006240!2.66e-07!41;UBERON:0000479!5.15e-07!787;UBERON:0004111!6.89e-07!241;UBERON:0002020!8.60e-07!34;UBERON:0003528!8.60e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.14e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.50e-22,114;UBERON:0002371,4.24e-20,76;UBERON:0000923,1.87e-18,560;UBERON:0010316,1.87e-18,560;UBERON:0005291,1.87e-18,560;UBERON:0006598,1.87e-18,560;UBERON:0010317,1.87e-18,560;UBERON:0002532,1.87e-18,560;UBERON:0002050,1.90e-18,564;UBERON:0001474,5.46e-18,82;UBERON:0004765,2.76e-17,90;UBERON:0001434,1.17e-16,100;UBERON:0005423,5.34e-16,581;UBERON:0002405,2.99e-15,93;UBERON:0002204,3.36e-15,167;UBERON:0000922,3.39e-15,592;UBERON:0002390,1.98e-13,98;UBERON:0003061,1.98e-13,98;UBERON:0000926,3.40e-13,315;UBERON:0004120,3.40e-13,315;UBERON:0006603,3.40e-13,315;UBERON:0002193,2.34e-12,108;UBERON:0003081,1.04e-10,203;UBERON:0001049,1.94e-10,56;UBERON:0005068,1.94e-10,56;UBERON:0006241,1.94e-10,56;UBERON:0007135,1.94e-10,56;UBERON:0000073,3.06e-09,53;UBERON:0002616,3.06e-09,53;UBERON:0003075,8.50e-09,82;UBERON:0007284,8.50e-09,82;UBERON:0000479,2.41e-08,773;UBERON:0002780,5.62e-08,41;UBERON:0001890,5.62e-08,41;UBERON:0003080,5.62e-08,41;UBERON:0006240,5.62e-08,41;UBERON:0002346,7.95e-08,86;UBERON:0003528,1.27e-07,34;UBERON:0002020,1.27e-07,34;UBERON:0001893,2.09e-07,34;UBERON:0002791,2.47e-07,32;UBERON:0010314,3.67e-07,132;UBERON:0001869,4.35e-07,32;UBERON:0002619,5.56e-07,22 | |||
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| ||
|short_description=p@chr20:23615955..23616000,- | |short_description=p@chr20:23615955..23616000,- | ||
}} | }} |
Latest revision as of 12:34, 28 July 2015
Short description: | p@chr20:23615955..23616000, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23615955..23616000, - |
Coexpression cluster: | C4018_occipital_Osteoblast_brain_Dendritic_Monocytederived_submaxillary_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.24e-24 | 61 |
defensive cell | 3.20e-24 | 48 |
phagocyte | 3.20e-24 | 48 |
monopoietic cell | 5.08e-24 | 59 |
monocyte | 5.08e-24 | 59 |
monoblast | 5.08e-24 | 59 |
promonocyte | 5.08e-24 | 59 |
classical monocyte | 1.03e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-21 | 42 |
granulocyte monocyte progenitor cell | 1.23e-21 | 67 |
myeloid lineage restricted progenitor cell | 2.89e-20 | 66 |
myeloid leukocyte | 2.27e-18 | 72 |
myeloid cell | 3.89e-07 | 108 |
common myeloid progenitor | 3.89e-07 | 108 |