FFCP PHASE1:Hg19::chr10:104262460..104262489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10121 | |EntrezGene=10121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=167 | |HGNC=167 | ||
|TSSclassifier=strong | |||
|UniProt=P61163,B4DXP9,F5H3I4 | |UniProt=P61163,B4DXP9,F5H3I4 | ||
|association_with_transcript=0bp_to_ENST00000369905,ENST00000446605,ENST00000545684_5end | |||
|cluster_id=chr10:104262460..104262489,- | |||
|description=CAGE_peak_1_at_ACTR1A_5end | |||
|id=chr10:104262460..104262489,- | |||
|ontology_enrichment_celltype=CL:0000055!2.79e-25!180;CL:0000222!4.31e-23!119;CL:0000220!2.29e-20!246;CL:0002321!8.44e-20!248;CL:0002371!1.54e-17!591;CL:0000183!5.95e-17!59;CL:0000192!8.73e-16!42;CL:0000514!8.73e-16!42;CL:0000393!3.07e-15!60;CL:0000211!3.07e-15!60;CL:0000680!9.16e-15!57;CL:0000056!9.16e-15!57;CL:0000355!9.16e-15!57;CL:0000144!1.72e-14!625;CL:0000187!1.74e-14!54;CL:0000359!2.34e-13!32;CL:0000115!1.11e-11!35;CL:0002078!8.58e-11!44;CL:0002139!9.23e-10!24;CL:0000057!3.00e-09!75;CL:0000213!3.43e-08!57;CL:0000215!3.43e-08!57;CL:0000071!3.50e-08!18;CL:0002546!3.50e-08!18;CL:1000449!1.17e-07!16;CL:0000221!8.06e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-12;32!CL:0000192;5.00e-11;43!CL:0000115;2.50e-10;36!CL:0002139;9.64e-10;24!CL:1000449;2.85e-08;15!CL:0000071;3.65e-08;18!CL:0000187;7.86e-08;55!CL:0002078;7.97e-08;45!CL:0000393;1.81e-07;61!CL:0000211;1.81e-07;61!CL:0002681;7.46e-07;12!CL:0002584;7.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.05e-23,121;CL:0002321,5.00e-20,250;CL:0000192,2.82e-15,43;CL:0000514,2.82e-15,43;CL:0000393,7.22e-15,61;CL:0000211,7.22e-15,61;CL:0000680,2.18e-14,58;CL:0000056,2.18e-14,58;CL:0000355,2.18e-14,58;CL:0000187,4.24e-14,55;CL:0000359,2.34e-13,32;CL:0000115,3.85e-12,36;CL:0002078,3.16e-11,45;CL:0002139,9.23e-10,24;CL:0000057,2.37e-09,76;CL:0000213,1.47e-08,58;CL:0000215,1.47e-08,58;CL:1000449,2.78e-08,15;CL:0000071,3.50e-08,18;CL:0002546,3.50e-08,18;CL:0000221,7.20e-07,72;CL:0002681,7.30e-07,12;CL:0002584,7.30e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.00e-11;43!CL:0002546;3.65e-08;18!CL:0000355;8.47e-08;58!CL:0000222;4.58e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.70e-23!312;UBERON:0002049!5.43e-23!79;UBERON:0007798!5.43e-23!79;UBERON:0000483!1.96e-22!309;UBERON:0000055!1.29e-19!69;UBERON:0001981!9.54e-18!60;UBERON:0007500!9.54e-18!60;UBERON:0004537!9.54e-18!60;UBERON:0006965!9.54e-18!60;UBERON:0000475!1.27e-17!365;UBERON:0004872!2.34e-17!84;UBERON:0000914!2.55e-17!83;UBERON:0002329!2.55e-17!83;UBERON:0003077!2.55e-17!83;UBERON:0003059!2.55e-17!83;UBERON:0007282!2.55e-17!83;UBERON:0009618!2.55e-17!83;UBERON:0007285!2.55e-17!83;UBERON:0001009!3.75e-17!113;UBERON:0000486!6.27e-17!82;UBERON:0004535!1.13e-16!110;UBERON:0001637!3.94e-16!42;UBERON:0003509!3.94e-16!42;UBERON:0004572!3.94e-16!42;UBERON:0000468!4.22e-16!659;UBERON:0004290!7.75e-16!70;UBERON:0000025!2.37e-15!194;UBERON:0000467!3.67e-15!625;UBERON:0000480!8.45e-15!626;UBERON:0003914!2.12e-14!118;UBERON:0001134!2.89e-14!61;UBERON:0002036!2.89e-14!61;UBERON:0003082!2.89e-14!61;UBERON:0002385!9.08e-14!63;UBERON:0001015!9.08e-14!63;UBERON:0000383!9.08e-14!63;UBERON:0004111!1.12e-13!241;UBERON:0005256!4.13e-13!143;UBERON:0000477!3.99e-12!286;UBERON:0004573!6.90e-12!33;UBERON:0004571!6.90e-12!33;UBERON:0000490!4.63e-11!138;UBERON:0000923!8.96e-11!604;UBERON:0005291!8.96e-11!604;UBERON:0006598!8.96e-11!604;UBERON:0002532!8.96e-11!604;UBERON:0002050!1.55e-10!605;UBERON:0005423!1.55e-10!605;UBERON:0000922!1.30e-09!612;UBERON:0000033!2.28e-09!123;UBERON:0005743!1.03e-08!86;UBERON:0004121!1.04e-08!169;UBERON:0001986!3.50e-08!18;UBERON:0004638!3.50e-08!18;UBERON:0004852!3.50e-08!18;UBERON:0000153!3.67e-08!129;UBERON:0007811!3.67e-08!129;UBERON:0001017!3.82e-08!82;UBERON:0000487!5.14e-08!22;UBERON:0003081!6.18e-08!216;UBERON:0003075!6.58e-08!86;UBERON:0007284!6.58e-08!86;UBERON:0003056!6.85e-08!61;UBERON:0000064!8.74e-08!219;UBERON:0000481!1.10e-07!347;UBERON:0004211!1.17e-07!16;UBERON:0001285!1.17e-07!16;UBERON:0007684!1.17e-07!16;UBERON:0003220!1.17e-07!16;UBERON:0004208!1.17e-07!16;UBERON:0000924!1.34e-07!173;UBERON:0006601!1.34e-07!173;UBERON:0002100!1.67e-07!216;UBERON:0000947!1.95e-07!21;UBERON:0010191!1.95e-07!21;UBERON:0000073!2.39e-07!94;UBERON:0001016!2.39e-07!94;UBERON:0000353!5.01e-07!17;UBERON:0006914!5.68e-07!25;UBERON:0000955!6.18e-07!69;UBERON:0006238!6.18e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;8.26e-12;56!UBERON:0001981;8.26e-12;56!UBERON:0004537;8.26e-12;56!UBERON:0001637;1.01e-11;42!UBERON:0003509;1.01e-11;42!UBERON:0004572;1.01e-11;42!UBERON:0003914;1.61e-11;74!UBERON:0004573;7.58e-11;33!UBERON:0004571;7.58e-11;33!UBERON:0000055;1.13e-10;65!UBERON:0002049;2.92e-10;75!UBERON:0007798;2.92e-10;75!UBERON:0006555;2.85e-08;15!UBERON:0004819;2.85e-08;15!UBERON:0001285;2.85e-08;15!UBERON:0007684;2.85e-08;15!UBERON:0004638;3.65e-08;18!UBERON:0001986;3.65e-08;18!UBERON:0004852;3.65e-08;18!UBERON:0000487;5.42e-08;22!UBERON:0000490;7.49e-08;33!UBERON:0000353;1.47e-07;15!UBERON:0000947;1.95e-07;21!UBERON:0010191;1.95e-07;21!UBERON:0006914;5.92e-07;25!UBERON:0001225;7.46e-07;12!UBERON:0008987;7.46e-07;12 | |||
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| ||
|short_description=p1@ACTR1A | |||
}} | }} |
Latest revision as of 01:33, 16 September 2015
Short description: | p1@ACTR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTR1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369905, ENST00000446605, ENST00000545684_5end |
EntrezGene: | ACTR1A |
HGNC: | 167 |
UniProt: | P61163B4DXP9F5H3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.05e-23 | 121 |
embryonic cell | 5.00e-20 | 250 |
smooth muscle cell | 2.82e-15 | 43 |
smooth muscle myoblast | 2.82e-15 | 43 |
electrically responsive cell | 7.22e-15 | 61 |
electrically active cell | 7.22e-15 | 61 |
muscle precursor cell | 2.18e-14 | 58 |
myoblast | 2.18e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-14 | 58 |
muscle cell | 4.24e-14 | 55 |
vascular associated smooth muscle cell | 2.34e-13 | 32 |
endothelial cell | 3.85e-12 | 36 |
meso-epithelial cell | 3.16e-11 | 45 |
endothelial cell of vascular tree | 9.23e-10 | 24 |
fibroblast | 2.37e-09 | 76 |
lining cell | 1.47e-08 | 58 |
barrier cell | 1.47e-08 | 58 |
epithelial cell of nephron | 2.78e-08 | 15 |
blood vessel endothelial cell | 3.50e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-08 | 18 |
ectodermal cell | 7.20e-07 | 72 |
kidney cortical cell | 7.30e-07 | 12 |
renal cortical epithelial cell | 7.30e-07 | 12 |