FFCP PHASE1:Hg19::chr2:85922440..85922471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10578 | |EntrezGene=10578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4414 | |HGNC=4414 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000526018_5end | |association_with_transcript=-19bp_to_ENST00000526018_5end | ||
|cluster_id=chr2:85922440..85922471,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_GNLY_5end | |description=CAGE_peak_4_at_GNLY_5end | ||
|id=chr2:85922440..85922471,+ | |id=chr2:85922440..85922471,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.89e-22!42;CL:0000738!3.93e-22!140;CL:0002087!4.31e-21!119;CL:0000860!2.06e-20!45;CL:0002031!2.80e-17!124;CL:0000625!9.59e-17!11;CL:0000037!4.10e-16!172;CL:0000566!4.10e-16!172;CL:0000791!3.50e-15!18;CL:0000789!3.50e-15!18;CL:0002420!3.50e-15!18;CL:0002419!3.50e-15!18;CL:0000790!3.50e-15!18;CL:0000988!2.06e-14!182;CL:0002032!7.36e-14!165;CL:0000837!7.36e-14!165;CL:0000084!1.83e-13!25;CL:0000827!1.83e-13!25;CL:0000766!5.48e-13!76;CL:0002194!4.56e-12!63;CL:0000576!4.56e-12!63;CL:0000040!4.56e-12!63;CL:0000559!4.56e-12!63;CL:0002009!1.76e-11!65;CL:0000839!4.21e-11!70;CL:0000557!7.61e-11!71;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112;CL:0000623!2.40e-07!3;CL:0000825!2.40e-07!3;CL:0000838!2.65e-07!52;CL:0000542!4.44e-07!53;CL:0000051!4.44e-07!53;CL:0000767!6.11e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.89e-22!42;CL:0000738!3.93e-22!140;CL:0002087!4.31e-21!119;CL:0000860!2.06e-20!45;CL:0002031!2.80e-17!124;CL:0000625!9.59e-17!11;CL:0000037!4.10e-16!172;CL:0000566!4.10e-16!172;CL:0000791!3.50e-15!18;CL:0000789!3.50e-15!18;CL:0002420!3.50e-15!18;CL:0002419!3.50e-15!18;CL:0000790!3.50e-15!18;CL:0000988!2.06e-14!182;CL:0002032!7.36e-14!165;CL:0000837!7.36e-14!165;CL:0000084!1.83e-13!25;CL:0000827!1.83e-13!25;CL:0000766!5.48e-13!76;CL:0002194!4.56e-12!63;CL:0000576!4.56e-12!63;CL:0000040!4.56e-12!63;CL:0000559!4.56e-12!63;CL:0002009!1.76e-11!65;CL:0000839!4.21e-11!70;CL:0000557!7.61e-11!71;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112;CL:0000623!2.40e-07!3;CL:0000825!2.40e-07!3;CL:0000838!2.65e-07!52;CL:0000542!4.44e-07!53;CL:0000051!4.44e-07!53;CL:0000767!6.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.55e-25;11!CL:0000791;8.68e-15;18!CL:0000789;8.68e-15;18!CL:0002419;8.68e-15;18!CL:0000623;1.42e-12;3!CL:0000084;1.81e-12;25!CL:0000767;1.53e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.93e-25,11;CL:0000791,7.37e-15,18;CL:0000789,7.37e-15,18;CL:0002420,7.37e-15,18;CL:0002419,7.37e-15,18;CL:0000790,7.37e-15,18;CL:0000623,1.43e-12,3;CL:0000825,1.43e-12,3;CL:0000084,1.73e-12,25;CL:0000827,1.73e-12,25;CL:0000767,8.36e-12,3;CL:0000838,5.23e-09,52;CL:0000542,8.76e-09,53;CL:0000051,8.76e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.68e-15;18!UBERON:0006601;3.18e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-33!115;UBERON:0001049!5.90e-32!57;UBERON:0005068!5.90e-32!57;UBERON:0006241!5.90e-32!57;UBERON:0007135!5.90e-32!57;UBERON:0002616!1.71e-26!59;UBERON:0002780!4.57e-25!41;UBERON:0001890!4.57e-25!41;UBERON:0006240!4.57e-25!41;UBERON:0003080!2.78e-24!42;UBERON:0001017!1.69e-22!82;UBERON:0000955!2.37e-22!69;UBERON:0006238!2.37e-22!69;UBERON:0005743!3.83e-22!86;UBERON:0001893!6.18e-22!34;UBERON:0002020!1.54e-21!34;UBERON:0003528!1.54e-21!34;UBERON:0003075!4.77e-21!86;UBERON:0007284!4.77e-21!86;UBERON:0002791!1.54e-20!33;UBERON:0002346!1.33e-19!90;UBERON:0001869!5.71e-19!32;UBERON:0000073!5.78e-19!94;UBERON:0001016!5.78e-19!94;UBERON:0002390!7.39e-19!102;UBERON:0003061!7.39e-19!102;UBERON:0002193!4.92e-17!112;UBERON:0003056!1.86e-15!61;UBERON:0002619!1.26e-14!22;UBERON:0000178!4.61e-13!15;UBERON:0000179!4.61e-13!15;UBERON:0000463!4.61e-13!15;UBERON:0000956!1.89e-12!25;UBERON:0000203!1.89e-12!25;UBERON:0001950!5.92e-12!20;UBERON:0002308!1.15e-11!9;UBERON:0000125!1.15e-11!9;UBERON:0000153!1.27e-11!129;UBERON:0007811!1.27e-11!129;UBERON:0000033!2.08e-10!123;UBERON:0002420!3.86e-09!9;UBERON:0007245!3.86e-09!9;UBERON:0010009!3.86e-09!9;UBERON:0010011!3.86e-09!9;UBERON:0000454!3.86e-09!9;UBERON:0009663!7.49e-09!7;UBERON:0002371!7.66e-09!80;UBERON:0003076!9.44e-09!15;UBERON:0003057!9.44e-09!15;UBERON:0002298!1.88e-08!8;UBERON:0001474!9.28e-08!86;UBERON:0000200!1.42e-07!6;UBERON:0004121!4.51e-07!169;UBERON:0004733!7.50e-07!12;UBERON:0002028!7.50e-07!12;UBERON:0007277!7.50e-07!12;UBERON:0002405!8.84e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.71e-23;41!UBERON:0001890;4.71e-23;41!UBERON:0000073;5.72e-23;53!UBERON:0002616;5.72e-23;53!UBERON:0001893;2.17e-22;34!UBERON:0003528;7.95e-20;34!UBERON:0002020;7.95e-20;34!UBERON:0002791;8.28e-20;32!UBERON:0001869;1.20e-19;32!UBERON:0002619;2.30e-18;22!UBERON:0000956;6.02e-16;25!UBERON:0000203;6.02e-16;25!UBERON:0001950;4.82e-14;20!UBERON:0000178;5.98e-14;15!UBERON:0000179;5.98e-14;15!UBERON:0000463;5.98e-14;15!UBERON:0000955;5.06e-11;68!UBERON:0000349;6.96e-11;5!UBERON:0001016;1.98e-10;83!UBERON:0002298;6.26e-10;6!UBERON:0001017;6.83e-10;75!UBERON:0002420;1.80e-09;9!UBERON:0000125;1.80e-09;9!UBERON:0007245;1.80e-09;9!UBERON:0002308;1.80e-09;9!UBERON:0010009;1.80e-09;9!UBERON:0010011;1.80e-09;9!UBERON:0000454;1.80e-09;9!UBERON:0007023;1.91e-09;114!UBERON:0001897;3.09e-08;2!UBERON:0010225;3.09e-08;2!UBERON:0009663;3.30e-08;7!UBERON:0001875;6.29e-08;2!UBERON:0006514;6.29e-08;2!UBERON:0001954;1.26e-07;2!UBERON:0003022;1.26e-07;2!UBERON:0002421;1.26e-07;2!UBERON:0002600;1.26e-07;2!UBERON:0004733;2.35e-07;12!UBERON:0002028;2.35e-07;12!UBERON:0004732;9.25e-07;13 | |||
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|short_description=p4@GNLY | |short_description=p4@GNLY | ||
}} | }} |
Latest revision as of 17:51, 18 September 2015
Short description: | p4@GNLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNLY_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -19bp_to_ENST00000526018_5end |
EntrezGene: | GNLY |
HGNC: | 4414 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.93e-25 | 11 |
mature alpha-beta T cell | 7.37e-15 | 18 |
alpha-beta T cell | 7.37e-15 | 18 |
immature T cell | 7.37e-15 | 18 |
mature T cell | 7.37e-15 | 18 |
immature alpha-beta T cell | 7.37e-15 | 18 |
natural killer cell | 1.43e-12 | 3 |
pro-NK cell | 1.43e-12 | 3 |
T cell | 1.73e-12 | 25 |
pro-T cell | 1.73e-12 | 25 |
basophil | 8.36e-12 | 3 |
lymphoid lineage restricted progenitor cell | 5.23e-09 | 52 |
lymphocyte | 8.76e-09 | 53 |
common lymphoid progenitor | 8.76e-09 | 53 |