FFCP PHASE1:Hg19::chr3:16553696..16553720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:16553696..16553720,+ | |||
|coexpression_cluster_id=C1919 | |||
|description=CAGE_peak_at_chr3:16553696..16553720,+ | |description=CAGE_peak_at_chr3:16553696..16553720,+ | ||
|id=chr3:16553696..16553720,+ | |id=chr3:16553696..16553720,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.54e-66!140;CL:0002031!2.25e-53!124;CL:0002087!4.39e-53!119;CL:0000037!5.98e-51!172;CL:0000566!5.98e-51!172;CL:0000988!1.27e-50!182;CL:0002032!3.52e-46!165;CL:0000837!3.52e-46!165;CL:0000838!2.32e-37!52;CL:0000542!2.24e-36!53;CL:0000051!2.24e-36!53;CL:0002057!6.57e-25!42;CL:0000945!1.47e-22!24;CL:0000826!1.47e-22!24;CL:0000860!1.53e-22!45;CL:0000134!1.36e-19!358;CL:0000766!1.15e-18!76;CL:0002320!1.24e-18!365;CL:0000557!2.48e-18!71;CL:0002009!4.16e-17!65;CL:0000839!5.68e-16!70;CL:0000219!2.82e-15!390;CL:0000236!3.81e-15!14;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0000763!5.83e-15!112;CL:0000049!5.83e-15!112;CL:0000791!2.72e-13!18;CL:0000789!2.72e-13!18;CL:0002420!2.72e-13!18;CL:0002419!2.72e-13!18;CL:0000790!2.72e-13!18;CL:0000034!4.50e-13!444;CL:0000084!8.40e-13!25;CL:0000827!8.40e-13!25;CL:0000048!9.70e-13!430;CL:0000723!3.68e-12!436;CL:0000451!5.53e-11!10;CL:0000624!8.73e-10!6;CL:0000453!4.92e-09!5;CL:0000080!9.16e-09!6;CL:0000990!2.75e-08!8;CL:0000625!5.53e-07!11 | |ontology_enrichment_celltype=CL:0000738!4.54e-66!140;CL:0002031!2.25e-53!124;CL:0002087!4.39e-53!119;CL:0000037!5.98e-51!172;CL:0000566!5.98e-51!172;CL:0000988!1.27e-50!182;CL:0002032!3.52e-46!165;CL:0000837!3.52e-46!165;CL:0000838!2.32e-37!52;CL:0000542!2.24e-36!53;CL:0000051!2.24e-36!53;CL:0002057!6.57e-25!42;CL:0000945!1.47e-22!24;CL:0000826!1.47e-22!24;CL:0000860!1.53e-22!45;CL:0000134!1.36e-19!358;CL:0000766!1.15e-18!76;CL:0002320!1.24e-18!365;CL:0000557!2.48e-18!71;CL:0002009!4.16e-17!65;CL:0000839!5.68e-16!70;CL:0000219!2.82e-15!390;CL:0000236!3.81e-15!14;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0000763!5.83e-15!112;CL:0000049!5.83e-15!112;CL:0000791!2.72e-13!18;CL:0000789!2.72e-13!18;CL:0002420!2.72e-13!18;CL:0002419!2.72e-13!18;CL:0000790!2.72e-13!18;CL:0000034!4.50e-13!444;CL:0000084!8.40e-13!25;CL:0000827!8.40e-13!25;CL:0000048!9.70e-13!430;CL:0000723!3.68e-12!436;CL:0000451!5.53e-11!10;CL:0000624!8.73e-10!6;CL:0000453!4.92e-09!5;CL:0000080!9.16e-09!6;CL:0000990!2.75e-08!8;CL:0000625!5.53e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.37e-21;53!CL:0000945;5.74e-18;24!CL:0000624;4.08e-17;6!CL:0002087;4.48e-17;104!CL:0000451;6.20e-17;10!CL:0000791;1.42e-16;18!CL:0000789;1.42e-16;18!CL:0002419;1.42e-16;18!CL:0000453;1.08e-15;5!CL:0000236;3.55e-15;13!CL:0000084;2.26e-13;25!CL:0000738;8.77e-13;136!CL:0000990;4.86e-12;8!CL:0000860;4.77e-11;33!CL:0002057;4.77e-11;33!CL:0000898;4.85e-10;3!CL:0000784;6.13e-10;3!CL:0000767;2.42e-09;3!CL:0000226;2.53e-09;3!CL:0000842;2.53e-09;3!CL:0000623;2.71e-09;3!CL:0000576;1.49e-07;48!CL:0000473;1.91e-07;39!CL:0000234;1.91e-07;39!CL:0001014;1.98e-07;2!CL:0001016;1.98e-07;2!CL:0000988;2.04e-07;177!CL:0000219;2.08e-07;193!CL:0000815;2.45e-07;2!CL:0000792;2.45e-07;2!CL:0002677;2.45e-07;2!CL:0000766;9.20e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.08e-64,136;CL:0000037,6.51e-49,168;CL:0000988,1.74e-47,177;CL:0002087,4.51e-46,115;CL:0002031,7.41e-46,120;CL:0002032,1.40e-41,161;CL:0000837,1.40e-41,161;CL:0000838,4.73e-36,52;CL:0000542,3.23e-35,53;CL:0000051,3.23e-35,53;CL:0000945,4.43e-18,24;CL:0000826,4.43e-18,24;CL:0000624,4.32e-17,6;CL:0000451,6.14e-17,10;CL:0000791,1.33e-16,18;CL:0000789,1.33e-16,18;CL:0002420,1.33e-16,18;CL:0002419,1.33e-16,18;CL:0000790,1.33e-16,18;CL:0000453,1.13e-15,5;CL:0000134,1.64e-15,354;CL:0002320,6.28e-15,361;CL:0000860,5.29e-14,42;CL:0002057,5.29e-14,42;CL:0000236,5.40e-14,14;CL:0000557,1.50e-13,67;CL:0000766,1.70e-13,72;CL:0000084,2.14e-13,25;CL:0000827,2.14e-13,25;CL:0000219,7.06e-13,386;CL:0000763,1.97e-12,108;CL:0000049,1.97e-12,108;CL:0002009,2.18e-12,61;CL:0000990,4.95e-12,8;CL:0000473,9.84e-12,48;CL:0000234,9.84e-12,48;CL:0000034,1.64e-11,441;CL:0000839,8.02e-11,66;CL:0000048,2.20e-10,427;CL:0000898,4.72e-10,3;CL:0000723,4.84e-10,433;CL:0000784,5.79e-10,3;CL:0002194,6.27e-10,59;CL:0000576,6.27e-10,59;CL:0000040,6.27e-10,59;CL:0000559,6.27e-10,59;CL:0000226,2.10e-09,3;CL:0000842,2.10e-09,3;CL:0000767,2.23e-09,3;CL:0000623,2.56e-09,3;CL:0000825,2.56e-09,3;CL:0001014,1.99e-07,2;CL:0001016,1.99e-07,2;CL:0000815,2.45e-07,2;CL:0000792,2.45e-07,2;CL:0002677,2.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.37e-21;53!CL:0000790;1.42e-16;18!CL:0002057;4.68e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.85e-21!102;UBERON:0003061!3.85e-21!102;UBERON:0002193!1.08e-18!112;UBERON:0002384!2.52e-17!375;UBERON:0002371!6.97e-17!80;UBERON:0001474!7.23e-15!86;UBERON:0002405!1.81e-14!115;UBERON:0004765!1.16e-11!101;UBERON:0001434!1.16e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.92e-14,371;UBERON:0002390,5.72e-13,98;UBERON:0003061,5.72e-13,98;UBERON:0002371,2.56e-11,76;UBERON:0002193,3.72e-11,108;UBERON:0001474,4.14e-10,82;UBERON:0002405,2.35e-09,93;UBERON:0004765,9.29e-09,90;UBERON:0001434,2.18e-07,100 | |||
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|short_description=p@chr3:16553696..16553720,+ | |short_description=p@chr3:16553696..16553720,+ | ||
}} | }} |
Latest revision as of 17:56, 29 July 2015
Short description: | p@chr3:16553696..16553720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:16553696..16553720, + |
Coexpression cluster: | C1919_immature_CD4_Dendritic_Peripheral_Natural_migratory_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.92e-14 | 371 |
hematopoietic system | 5.72e-13 | 98 |
blood island | 5.72e-13 | 98 |
bone marrow | 2.56e-11 | 76 |
hemolymphoid system | 3.72e-11 | 108 |
bone element | 4.14e-10 | 82 |
immune system | 2.35e-09 | 93 |
skeletal element | 9.29e-09 | 90 |
skeletal system | 2.18e-07 | 100 |