FFCP PHASE1:Hg19::chr5:82767585..82767607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1462 | |EntrezGene=1462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2464 | |HGNC=2464 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGZ6 | |UniProt=D6RGZ6 | ||
|association_with_transcript=0bp_to_ENST00000513960_5end | |association_with_transcript=0bp_to_ENST00000513960_5end | ||
|cluster_id=chr5:82767585..82767607,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_2_at_VCAN_5end | |description=CAGE_peak_2_at_VCAN_5end | ||
|id=chr5:82767585..82767607,+ | |id=chr5:82767585..82767607,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.11e-23!42;CL:0000860!1.87e-19!45;CL:0000055!1.83e-18!180;CL:0000048!9.58e-16!430;CL:0000034!5.10e-15!444;CL:0000723!1.14e-14!436;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000187!1.70e-13!54;CL:0000393!3.85e-13!60;CL:0000211!3.85e-13!60;CL:0000183!3.77e-12!59;CL:0000057!2.31e-11!75;CL:0000192!6.91e-11!42;CL:0000514!6.91e-11!42;CL:0002194!6.98e-11!63;CL:0000576!6.98e-11!63;CL:0000040!6.98e-11!63;CL:0000559!6.98e-11!63;CL:0000359!1.20e-10!32;CL:0002009!1.17e-09!65;CL:0000766!5.81e-08!76;CL:0000839!1.11e-07!70;CL:0000557!1.66e-07!71;CL:0002494!2.50e-07!16;CL:0002334!4.74e-07!12 | |ontology_enrichment_celltype=CL:0002057!2.11e-23!42;CL:0000860!1.87e-19!45;CL:0000055!1.83e-18!180;CL:0000048!9.58e-16!430;CL:0000034!5.10e-15!444;CL:0000723!1.14e-14!436;CL:0000680!1.09e-13!57;CL:0000056!1.09e-13!57;CL:0000355!1.09e-13!57;CL:0000187!1.70e-13!54;CL:0000393!3.85e-13!60;CL:0000211!3.85e-13!60;CL:0000183!3.77e-12!59;CL:0000057!2.31e-11!75;CL:0000192!6.91e-11!42;CL:0000514!6.91e-11!42;CL:0002194!6.98e-11!63;CL:0000576!6.98e-11!63;CL:0000040!6.98e-11!63;CL:0000559!6.98e-11!63;CL:0000359!1.20e-10!32;CL:0002009!1.17e-09!65;CL:0000766!5.81e-08!76;CL:0000839!1.11e-07!70;CL:0000557!1.66e-07!71;CL:0002494!2.50e-07!16;CL:0002334!4.74e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.44e-20;33!CL:0002057;8.44e-20;33!CL:0000473;2.36e-13;39!CL:0000234;2.36e-13;39!CL:0000576;1.37e-12;48!CL:0000359;3.11e-10;32!CL:0000192;1.58e-08;43!CL:0000187;6.78e-08;55!CL:0000393;1.53e-07;61!CL:0000211;1.53e-07;61!CL:0002494;2.10e-07;16!CL:0002334;4.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-23,42;CL:0002057,1.11e-23,42;CL:0000473,1.57e-19,48;CL:0000234,1.57e-19,48;CL:0000048,3.32e-17,427;CL:0000034,1.96e-16,441;CL:0000723,4.56e-16,433;CL:0000680,5.12e-14,58;CL:0000056,5.12e-14,58;CL:0000355,5.12e-14,58;CL:0000187,8.13e-14,55;CL:0000393,1.84e-13,61;CL:0000211,1.84e-13,61;CL:0002194,2.28e-12,59;CL:0000576,2.28e-12,59;CL:0000040,2.28e-12,59;CL:0000559,2.28e-12,59;CL:0000057,1.13e-11,76;CL:0000192,3.60e-11,43;CL:0000514,3.60e-11,43;CL:0002009,4.55e-11,61;CL:0000359,9.21e-11,32;CL:0000766,6.91e-09,72;CL:0000839,9.72e-09,66;CL:0000557,1.56e-08,67;CL:0002494,2.11e-07,16;CL:0002320,3.49e-07,361;CL:0002334,4.03e-07,12;CL:0000134,4.83e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-17;42!CL:0000514;1.58e-08;43!CL:0000355;8.05e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.80e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.80e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.58e-20!167;UBERON:0000468!5.71e-17!659;UBERON:0000467!9.77e-15!625;UBERON:0000480!2.01e-14!626;UBERON:0001134!6.85e-14!61;UBERON:0002036!6.85e-14!61;UBERON:0003082!6.85e-14!61;UBERON:0002385!1.44e-13!63;UBERON:0001015!1.44e-13!63;UBERON:0000383!1.44e-13!63;UBERON:0000914!1.61e-13!83;UBERON:0002329!1.61e-13!83;UBERON:0003077!1.61e-13!83;UBERON:0003059!1.61e-13!83;UBERON:0007282!1.61e-13!83;UBERON:0009618!1.61e-13!83;UBERON:0007285!1.61e-13!83;UBERON:0004290!4.89e-13!70;UBERON:0003081!5.93e-13!216;UBERON:0000479!8.34e-12!787;UBERON:0000922!1.20e-11!612;UBERON:0000926!1.38e-11!448;UBERON:0004120!1.38e-11!448;UBERON:0006603!1.38e-11!448;UBERON:0002050!8.25e-11!605;UBERON:0005423!8.25e-11!605;UBERON:0000923!1.44e-10!604;UBERON:0005291!1.44e-10!604;UBERON:0006598!1.44e-10!604;UBERON:0002532!1.44e-10!604;UBERON:0000486!2.36e-09!82;UBERON:0000948!3.58e-09!24;UBERON:0005498!3.58e-09!24;UBERON:0004140!3.58e-09!24;UBERON:0009881!3.58e-09!24;UBERON:0004141!3.58e-09!24;UBERON:0003084!3.58e-09!24;UBERON:0007005!3.58e-09!24;UBERON:0004139!3.58e-09!24;UBERON:0004291!3.58e-09!24;UBERON:0007100!1.19e-08!27;UBERON:0004535!1.45e-08!110;UBERON:0001009!1.47e-08!113;UBERON:0001637!1.09e-07!42;UBERON:0003509!1.09e-07!42;UBERON:0004572!1.09e-07!42;UBERON:0004573!1.31e-07!33;UBERON:0004571!1.31e-07!33;UBERON:0004872!1.79e-07!84;UBERON:0004765!2.26e-07!101;UBERON:0001434!2.26e-07!101;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0002371!4.90e-07!80;UBERON:0005256!5.07e-07!143;UBERON:0000062!7.24e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.16e-08;22!UBERON:0007100;3.89e-08;25!UBERON:0002385;2.64e-07;31!UBERON:0001015;2.64e-07;31!UBERON:0000383;2.64e-07;31!UBERON:0004573;6.07e-07;33!UBERON:0004571;6.07e-07;33 | |||
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| ||
|short_description=p2@VCAN | |short_description=p2@VCAN | ||
}} | }} |
Latest revision as of 00:43, 19 September 2015
Short description: | p2@VCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VCAN_5end |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | 0bp_to_ENST00000513960_5end |
EntrezGene: | VCAN |
HGNC: | 2464 |
UniProt: | D6RGZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-23 | 42 |
defensive cell | 1.57e-19 | 48 |
phagocyte | 1.57e-19 | 48 |
multi fate stem cell | 3.32e-17 | 427 |
stem cell | 1.96e-16 | 441 |
somatic stem cell | 4.56e-16 | 433 |
muscle precursor cell | 5.12e-14 | 58 |
myoblast | 5.12e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.12e-14 | 58 |
muscle cell | 8.13e-14 | 55 |
electrically responsive cell | 1.84e-13 | 61 |
electrically active cell | 1.84e-13 | 61 |
monopoietic cell | 2.28e-12 | 59 |
monocyte | 2.28e-12 | 59 |
monoblast | 2.28e-12 | 59 |
promonocyte | 2.28e-12 | 59 |
fibroblast | 1.13e-11 | 76 |
smooth muscle cell | 3.60e-11 | 43 |
smooth muscle myoblast | 3.60e-11 | 43 |
macrophage dendritic cell progenitor | 4.55e-11 | 61 |
vascular associated smooth muscle cell | 9.21e-11 | 32 |
myeloid leukocyte | 6.91e-09 | 72 |
myeloid lineage restricted progenitor cell | 9.72e-09 | 66 |
granulocyte monocyte progenitor cell | 1.56e-08 | 67 |
cardiocyte | 2.11e-07 | 16 |
connective tissue cell | 3.49e-07 | 361 |
preadipocyte | 4.03e-07 | 12 |
mesenchymal cell | 4.83e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.80e-08 | 14 |