FFCP PHASE1:Hg19::chr7:100775178..100775193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100775178..100775193,- | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_at_chr7:100775178..100775193,- | |description=CAGE_peak_at_chr7:100775178..100775193,- | ||
|id=chr7:100775178..100775193,- | |id=chr7:100775178..100775193,- | ||
|ontology_enrichment_celltype=CL:0000222!3.38e-31!119;CL:0000055!6.19e-26!180;CL:0000680!6.08e-24!57;CL:0000056!6.08e-24!57;CL:0000355!6.08e-24!57;CL:0000183!8.25e-24!59;CL:0000187!2.27e-22!54;CL:0002371!2.42e-22!591;CL:0000144!2.43e-22!625;CL:0000192!3.50e-21!42;CL:0000514!3.50e-21!42;CL:0000359!1.63e-20!32;CL:0000393!2.56e-18!60;CL:0000211!2.56e-18!60;CL:0000220!4.33e-18!246;CL:0002321!1.25e-17!248;CL:0000548!3.92e-17!679;CL:0000004!3.92e-17!679;CL:0000255!3.92e-17!679;CL:0000012!1.07e-16!682;CL:0000057!5.08e-13!75;CL:0000003!2.79e-11!722;CL:0000115!8.07e-11!35;CL:0002139!1.07e-10!24;CL:0000723!4.29e-10!436;CL:0002078!4.89e-10!44;CL:0000048!5.66e-10!430;CL:0000213!7.49e-10!57;CL:0000215!7.49e-10!57;CL:0000034!4.01e-09!444;CL:0002494!2.18e-08!16;CL:0002620!1.30e-07!23;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18 | |ontology_enrichment_celltype=CL:0000222!3.38e-31!119;CL:0000055!6.19e-26!180;CL:0000680!6.08e-24!57;CL:0000056!6.08e-24!57;CL:0000355!6.08e-24!57;CL:0000183!8.25e-24!59;CL:0000187!2.27e-22!54;CL:0002371!2.42e-22!591;CL:0000144!2.43e-22!625;CL:0000192!3.50e-21!42;CL:0000514!3.50e-21!42;CL:0000359!1.63e-20!32;CL:0000393!2.56e-18!60;CL:0000211!2.56e-18!60;CL:0000220!4.33e-18!246;CL:0002321!1.25e-17!248;CL:0000548!3.92e-17!679;CL:0000004!3.92e-17!679;CL:0000255!3.92e-17!679;CL:0000012!1.07e-16!682;CL:0000057!5.08e-13!75;CL:0000003!2.79e-11!722;CL:0000115!8.07e-11!35;CL:0002139!1.07e-10!24;CL:0000723!4.29e-10!436;CL:0002078!4.89e-10!44;CL:0000048!5.66e-10!430;CL:0000213!7.49e-10!57;CL:0000215!7.49e-10!57;CL:0000034!4.01e-09!444;CL:0002494!2.18e-08!16;CL:0002620!1.30e-07!23;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.35e-23;32!CL:0000192;7.23e-16;43!CL:0000187;1.47e-13;55!CL:0000115;1.20e-11;36!CL:0002494;3.37e-11;16!CL:0002139;7.03e-11;24!CL:0000393;8.97e-09;61!CL:0000211;8.97e-09;61!CL:1000746;2.91e-08;7!CL:1000612;2.91e-08;7!CL:0000071;1.01e-07;18!CL:0002595;4.20e-07;5!CL:0002548;4.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.78e-28,121;CL:0000359,2.62e-24,32;CL:0000187,5.67e-24,55;CL:0000680,6.50e-24,58;CL:0000056,6.50e-24,58;CL:0000355,6.50e-24,58;CL:0000192,9.43e-23,43;CL:0000514,9.43e-23,43;CL:0000393,1.20e-20,61;CL:0000211,1.20e-20,61;CL:0000115,1.61e-12,36;CL:0002321,1.62e-11,250;CL:0002494,4.35e-11,16;CL:0002139,8.33e-11,24;CL:0002078,5.28e-09,45;CL:0000213,1.56e-08,58;CL:0000215,1.56e-08,58;CL:0000048,2.53e-08,427;CL:1000746,2.74e-08,7;CL:1000612,2.74e-08,7;CL:0000723,6.18e-08,433;CL:0000071,1.20e-07,18;CL:0002546,1.20e-07,18;CL:0000034,1.94e-07,441;CL:0002548,3.21e-07,6;CL:0002595,4.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;7.23e-16;43!CL:0000355;2.77e-12;58!CL:0000222;7.44e-08;121!CL:0002546;1.01e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!2.51e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.53e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.55e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.33e-34!79;UBERON:0007798!1.33e-34!79;UBERON:0000055!1.40e-30!69;UBERON:0004535!5.00e-30!110;UBERON:0001009!3.80e-29!113;UBERON:0003914!2.44e-27!118;UBERON:0004872!9.90e-27!84;UBERON:0001981!2.65e-26!60;UBERON:0007500!2.65e-26!60;UBERON:0004537!2.65e-26!60;UBERON:0006965!2.65e-26!60;UBERON:0004290!1.62e-23!70;UBERON:0001637!2.83e-23!42;UBERON:0003509!2.83e-23!42;UBERON:0004572!2.83e-23!42;UBERON:0000486!8.65e-22!82;UBERON:0001134!4.34e-21!61;UBERON:0002036!4.34e-21!61;UBERON:0003082!4.34e-21!61;UBERON:0000914!4.39e-21!83;UBERON:0002329!4.39e-21!83;UBERON:0003077!4.39e-21!83;UBERON:0003059!4.39e-21!83;UBERON:0007282!4.39e-21!83;UBERON:0009618!4.39e-21!83;UBERON:0007285!4.39e-21!83;UBERON:0002385!8.21e-20!63;UBERON:0001015!8.21e-20!63;UBERON:0000383!8.21e-20!63;UBERON:0000490!2.90e-19!138;UBERON:0005256!2.30e-18!143;UBERON:0004573!1.73e-17!33;UBERON:0004571!1.73e-17!33;UBERON:0002100!1.14e-12!216;UBERON:0000119!1.36e-12!312;UBERON:0000483!6.11e-12!309;UBERON:0000947!6.52e-09!21;UBERON:0010191!6.52e-09!21;UBERON:0000025!1.22e-08!194;UBERON:0004111!1.29e-08!241;UBERON:0003513!9.80e-08!8;UBERON:0000948!1.14e-07!24;UBERON:0005498!1.14e-07!24;UBERON:0004140!1.14e-07!24;UBERON:0009881!1.14e-07!24;UBERON:0004141!1.14e-07!24;UBERON:0003084!1.14e-07!24;UBERON:0007005!1.14e-07!24;UBERON:0004139!1.14e-07!24;UBERON:0004291!1.14e-07!24;UBERON:0000475!1.34e-07!365;UBERON:0000477!1.62e-07!286;UBERON:0003104!1.90e-07!238;UBERON:0009142!1.90e-07!238;UBERON:0001986!2.26e-07!18;UBERON:0004638!2.26e-07!18;UBERON:0004852!2.26e-07!18;UBERON:0000487!5.64e-07!22;UBERON:0007100!8.24e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.23e-21;42!UBERON:0003509;1.23e-21;42!UBERON:0004572;1.23e-21;42!UBERON:0004573;2.54e-20;33!UBERON:0004571;2.54e-20;33!UBERON:0007500;1.27e-16;56!UBERON:0001981;1.27e-16;56!UBERON:0004537;1.27e-16;56!UBERON:0002049;9.08e-15;75!UBERON:0007798;9.08e-15;75!UBERON:0000055;2.86e-14;65!UBERON:0003914;4.32e-14;74!UBERON:0000947;2.62e-11;21!UBERON:0010191;2.62e-11;21!UBERON:0001009;6.95e-09;112!UBERON:0004535;1.78e-08;109!UBERON:0000074;2.91e-08;7!UBERON:0001229;2.91e-08;7!UBERON:0004638;1.01e-07;18!UBERON:0001986;1.01e-07;18!UBERON:0004852;1.01e-07;18!UBERON:0000948;1.96e-07;22!UBERON:0000025;2.27e-07;93!UBERON:0003513;3.02e-07;7!UBERON:0000487;3.75e-07;22!UBERON:0003834;4.20e-07;5!UBERON:0001533;4.20e-07;5 | |||
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| ||
|short_description=p@chr7:100775178..100775193,- | |short_description=p@chr7:100775178..100775193,- | ||
}} | }} |
Latest revision as of 04:15, 31 July 2015
Short description: | p@chr7:100775178..100775193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100775178..100775193, - |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.78e-28 | 121 |
vascular associated smooth muscle cell | 2.62e-24 | 32 |
muscle cell | 5.67e-24 | 55 |
muscle precursor cell | 6.50e-24 | 58 |
myoblast | 6.50e-24 | 58 |
multi-potent skeletal muscle stem cell | 6.50e-24 | 58 |
smooth muscle cell | 9.43e-23 | 43 |
smooth muscle myoblast | 9.43e-23 | 43 |
electrically responsive cell | 1.20e-20 | 61 |
electrically active cell | 1.20e-20 | 61 |
endothelial cell | 1.61e-12 | 36 |
embryonic cell | 1.62e-11 | 250 |
cardiocyte | 4.35e-11 | 16 |
endothelial cell of vascular tree | 8.33e-11 | 24 |
meso-epithelial cell | 5.28e-09 | 45 |
lining cell | 1.56e-08 | 58 |
barrier cell | 1.56e-08 | 58 |
multi fate stem cell | 2.53e-08 | 427 |
glomerular cell | 2.74e-08 | 7 |
kidney corpuscule cell | 2.74e-08 | 7 |
somatic stem cell | 6.18e-08 | 433 |
blood vessel endothelial cell | 1.20e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.20e-07 | 18 |
stem cell | 1.94e-07 | 441 |
cardiac fibroblast | 3.21e-07 | 6 |
smooth muscle cell of the subclavian artery | 4.08e-07 | 5 |
Ontology term | p-value | n |
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