FFCP PHASE1:Hg19::chr4:46391473..46391496,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |HGNC=4076 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAA9 | |UniProt=D6RAA9 | ||
|association_with_transcript=70bp_to_ENST00000507460,uc010igd.1_5end | |association_with_transcript=70bp_to_ENST00000507460,uc010igd.1_5end | ||
|cluster_id=chr4:46391473..46391496,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_8_at_GABRA2_5end | |description=CAGE_peak_8_at_GABRA2_5end | ||
|id=chr4:46391473..46391496,- | |id=chr4:46391473..46391496,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.31e-08;1!CL:0002563;1.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.32e-08,1;CL:0002563,1.15e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.39e-09;82!UBERON:0006222;1.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.36e-69!57;UBERON:0005068!4.36e-69!57;UBERON:0006241!4.36e-69!57;UBERON:0007135!4.36e-69!57;UBERON:0001869!4.19e-58!32;UBERON:0001893!6.25e-58!34;UBERON:0002020!1.86e-57!34;UBERON:0003528!1.86e-57!34;UBERON:0002616!6.54e-57!59;UBERON:0002780!7.06e-57!41;UBERON:0001890!7.06e-57!41;UBERON:0006240!7.06e-57!41;UBERON:0002791!8.40e-56!33;UBERON:0003080!2.66e-55!42;UBERON:0003075!8.53e-53!86;UBERON:0007284!8.53e-53!86;UBERON:0000955!1.55e-51!69;UBERON:0006238!1.55e-51!69;UBERON:0001017!6.80e-51!82;UBERON:0002619!1.72e-50!22;UBERON:0005743!2.94e-50!86;UBERON:0002346!7.97e-50!90;UBERON:0001950!4.13e-46!20;UBERON:0003056!1.61e-44!61;UBERON:0000073!3.02e-44!94;UBERON:0001016!3.02e-44!94;UBERON:0000956!8.32e-44!25;UBERON:0000203!8.32e-44!25;UBERON:0007023!8.80e-36!115;UBERON:0000033!7.72e-31!123;UBERON:0000153!3.94e-30!129;UBERON:0007811!3.94e-30!129;UBERON:0004121!2.80e-24!169;UBERON:0000924!2.17e-23!173;UBERON:0006601!2.17e-23!173;UBERON:0000064!2.76e-20!219;UBERON:0001871!6.72e-19!7;UBERON:0002420!8.19e-16!9;UBERON:0007245!8.19e-16!9;UBERON:0010009!8.19e-16!9;UBERON:0010011!8.19e-16!9;UBERON:0000454!8.19e-16!9;UBERON:0000025!1.05e-15!194;UBERON:0000483!5.27e-15!309;UBERON:0002308!8.42e-15!9;UBERON:0000125!8.42e-15!9;UBERON:0000119!1.06e-14!312;UBERON:0003076!1.62e-14!15;UBERON:0003057!1.62e-14!15;UBERON:0000200!2.76e-14!6;UBERON:0000481!3.70e-14!347;UBERON:0000062!4.61e-14!511;UBERON:0000349!1.97e-12!5;UBERON:0000475!1.98e-12!365;UBERON:0004111!2.87e-12!241;UBERON:0001872!4.40e-12!5;UBERON:0002021!5.53e-12!5;UBERON:0000477!6.53e-12!286;UBERON:0005409!1.15e-11!35;UBERON:0009663!1.71e-11!7;UBERON:0000369!4.38e-10!4;UBERON:0002435!4.38e-10!4;UBERON:0000204!4.38e-10!4;UBERON:0010082!4.38e-10!4;UBERON:0004733!1.57e-09!12;UBERON:0002028!1.57e-09!12;UBERON:0007277!1.57e-09!12;UBERON:0000059!2.63e-09!11;UBERON:0000160!4.43e-09!27;UBERON:0004732!1.08e-08!13;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0001155!1.27e-08!9;UBERON:0002298!1.61e-08!8;UBERON:0000922!2.58e-08!612;UBERON:0002771!3.11e-08!3;UBERON:0000923!4.05e-08!604;UBERON:0005291!4.05e-08!604;UBERON:0006598!4.05e-08!604;UBERON:0002532!4.05e-08!604;UBERON:0005383!4.43e-08!3;UBERON:0005382!4.43e-08!3;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.20e-07!626;UBERON:0002240!2.08e-07!3;UBERON:0000468!9.18e-07!659;UBERON:0001896!9.38e-07!3;UBERON:0005290!9.38e-07!3;UBERON:0010096!9.38e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!4.36e-69!57;UBERON:0005068!4.36e-69!57;UBERON:0006241!4.36e-69!57;UBERON:0007135!4.36e-69!57;UBERON:0001869!4.19e-58!32;UBERON:0001893!6.25e-58!34;UBERON:0002020!1.86e-57!34;UBERON:0003528!1.86e-57!34;UBERON:0002616!6.54e-57!59;UBERON:0002780!7.06e-57!41;UBERON:0001890!7.06e-57!41;UBERON:0006240!7.06e-57!41;UBERON:0002791!8.40e-56!33;UBERON:0003080!2.66e-55!42;UBERON:0003075!8.53e-53!86;UBERON:0007284!8.53e-53!86;UBERON:0000955!1.55e-51!69;UBERON:0006238!1.55e-51!69;UBERON:0001017!6.80e-51!82;UBERON:0002619!1.72e-50!22;UBERON:0005743!2.94e-50!86;UBERON:0002346!7.97e-50!90;UBERON:0001950!4.13e-46!20;UBERON:0003056!1.61e-44!61;UBERON:0000073!3.02e-44!94;UBERON:0001016!3.02e-44!94;UBERON:0000956!8.32e-44!25;UBERON:0000203!8.32e-44!25;UBERON:0007023!8.80e-36!115;UBERON:0000033!7.72e-31!123;UBERON:0000153!3.94e-30!129;UBERON:0007811!3.94e-30!129;UBERON:0004121!2.80e-24!169;UBERON:0000924!2.17e-23!173;UBERON:0006601!2.17e-23!173;UBERON:0000064!2.76e-20!219;UBERON:0001871!6.72e-19!7;UBERON:0002420!8.19e-16!9;UBERON:0007245!8.19e-16!9;UBERON:0010009!8.19e-16!9;UBERON:0010011!8.19e-16!9;UBERON:0000454!8.19e-16!9;UBERON:0000025!1.05e-15!194;UBERON:0000483!5.27e-15!309;UBERON:0002308!8.42e-15!9;UBERON:0000125!8.42e-15!9;UBERON:0000119!1.06e-14!312;UBERON:0003076!1.62e-14!15;UBERON:0003057!1.62e-14!15;UBERON:0000200!2.76e-14!6;UBERON:0000481!3.70e-14!347;UBERON:0000062!4.61e-14!511;UBERON:0000349!1.97e-12!5;UBERON:0000475!1.98e-12!365;UBERON:0004111!2.87e-12!241;UBERON:0001872!4.40e-12!5;UBERON:0002021!5.53e-12!5;UBERON:0000477!6.53e-12!286;UBERON:0005409!1.15e-11!35;UBERON:0009663!1.71e-11!7;UBERON:0000369!4.38e-10!4;UBERON:0002435!4.38e-10!4;UBERON:0000204!4.38e-10!4;UBERON:0010082!4.38e-10!4;UBERON:0004733!1.57e-09!12;UBERON:0002028!1.57e-09!12;UBERON:0007277!1.57e-09!12;UBERON:0000059!2.63e-09!11;UBERON:0000160!4.43e-09!27;UBERON:0004732!1.08e-08!13;UBERON:0002050!1.20e-08!605;UBERON:0005423!1.20e-08!605;UBERON:0001155!1.27e-08!9;UBERON:0002298!1.61e-08!8;UBERON:0000922!2.58e-08!612;UBERON:0002771!3.11e-08!3;UBERON:0000923!4.05e-08!604;UBERON:0005291!4.05e-08!604;UBERON:0006598!4.05e-08!604;UBERON:0002532!4.05e-08!604;UBERON:0005383!4.43e-08!3;UBERON:0005382!4.43e-08!3;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.20e-07!626;UBERON:0002240!2.08e-07!3;UBERON:0000468!9.18e-07!659;UBERON:0001896!9.38e-07!3;UBERON:0005290!9.38e-07!3;UBERON:0010096!9.38e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.96e-60;22!UBERON:0001950;4.40e-57;20!UBERON:0000956;1.07e-52;25!UBERON:0000203;1.07e-52;25!UBERON:0001869;7.38e-52;32!UBERON:0001893;1.09e-48;34!UBERON:0002791;7.36e-47;32!UBERON:0003528;5.09e-42;34!UBERON:0002020;5.09e-42;34!UBERON:0002780;1.11e-37;41!UBERON:0001890;1.11e-37;41!UBERON:0000073;1.34e-23;53!UBERON:0002616;1.34e-23;53!UBERON:0001871;3.71e-23;6!UBERON:0001017;1.48e-20;75!UBERON:0000955;1.22e-18;68!UBERON:0000200;1.91e-17;6!UBERON:0001016;4.60e-17;83!UBERON:0002771;4.31e-14;2!UBERON:0001876;9.75e-14;2!UBERON:0000349;2.55e-12;5!UBERON:0001872;2.86e-12;5!UBERON:0002021;4.63e-12;5!UBERON:0002420;1.08e-11;9!UBERON:0007245;1.08e-11;9!UBERON:0010009;1.08e-11;9!UBERON:0010011;1.08e-11;9!UBERON:0000454;1.08e-11;9!UBERON:0011216;9.41e-11;132!UBERON:0005383;1.08e-09;3!UBERON:0005382;1.08e-09;3!UBERON:0001870;1.86e-09;3!UBERON:0002022;1.04e-07;1!UBERON:0001874;1.04e-07;1!UBERON:0007190;1.04e-07;1!UBERON:0001242;1.44e-07;4!UBERON:0001262;1.44e-07;4!UBERON:0004786;1.44e-07;4!UBERON:0004808;1.44e-07;4!UBERON:0001277;1.44e-07;4!UBERON:0000369;1.78e-07;4!UBERON:0002435;1.78e-07;4!UBERON:0000204;1.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.81e-60,22;UBERON:0001869,1.55e-59,32;UBERON:0002780,2.85e-57,41;UBERON:0001890,2.85e-57,41;UBERON:0003080,2.85e-57,41;UBERON:0006240,2.85e-57,41;UBERON:0001950,4.20e-57,20;UBERON:0001893,6.23e-56,34;UBERON:0002791,4.48e-53,32;UBERON:0000956,1.04e-52,25;UBERON:0000203,1.04e-52,25;UBERON:0003528,7.51e-50,34;UBERON:0002020,7.51e-50,34;UBERON:0001049,1.45e-45,56;UBERON:0005068,1.45e-45,56;UBERON:0006241,1.45e-45,56;UBERON:0007135,1.45e-45,56;UBERON:0000073,1.13e-43,53;UBERON:0002616,1.13e-43,53;UBERON:0000955,3.81e-40,68;UBERON:0006238,3.81e-40,68;UBERON:0001017,5.55e-40,81;UBERON:0003056,1.58e-37,61;UBERON:0001016,1.26e-35,89;UBERON:0003075,5.32e-30,82;UBERON:0007284,5.32e-30,82;UBERON:0002346,1.98e-28,86;UBERON:0001871,1.95e-23,6;UBERON:0010371,7.65e-23,104;UBERON:0011216,1.26e-20,223;UBERON:0000200,2.76e-17,6;UBERON:0010314,3.74e-17,132;UBERON:0004121,1.15e-16,171;UBERON:0000924,1.15e-16,171;UBERON:0006601,1.15e-16,171;UBERON:0007023,1.67e-16,114;UBERON:0001876,3.21e-14,2;UBERON:0002771,5.44e-14,2;UBERON:0000349,1.34e-12,5;UBERON:0001872,5.20e-12,5;UBERON:0002021,5.62e-12,5;UBERON:0002420,5.92e-12,9;UBERON:0007245,5.92e-12,9;UBERON:0010009,5.92e-12,9;UBERON:0010011,5.92e-12,9;UBERON:0000454,5.92e-12,9;UBERON:0000025,7.77e-12,192;UBERON:0005383,8.91e-10,3;UBERON:0005382,8.91e-10,3;UBERON:0004111,1.15e-09,240;UBERON:0001870,1.64e-09,3;UBERON:0000483,2.03e-09,306;UBERON:0000119,2.80e-09,309;UBERON:0001874,6.97e-08,1;UBERON:0002022,7.45e-08,1;UBERON:0001242,1.15e-07,4;UBERON:0001262,1.15e-07,4;UBERON:0004786,1.15e-07,4;UBERON:0004808,1.15e-07,4;UBERON:0001277,1.15e-07,4;UBERON:0000369,1.54e-07,4;UBERON:0002435,1.54e-07,4;UBERON:0000204,1.54e-07,4;UBERON:0010082,1.54e-07,4;UBERON:0007190,1.64e-07,1 | |||
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|short_description=p8@GABRA2 | |short_description=p8@GABRA2 | ||
}} | }} |
Latest revision as of 21:35, 17 September 2015
Short description: | p8@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GABRA2_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 70bp_to_ENST00000507460, uc010igd.1_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | D6RAA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.32e-08 | 1 |
intestinal epithelial cell | 1.15e-07 | 4 |