FFCP PHASE1:Hg19::chr6:38607628..38607651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114781 | |EntrezGene=114781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21228 | |HGNC=21228 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVC1 | |UniProt=C9JVC1 | ||
|association_with_transcript=0bp_to_ENST00000498633_5end | |association_with_transcript=0bp_to_ENST00000498633_5end | ||
|cluster_id=chr6:38607628..38607651,- | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_3_at_BTBD9_5end | |description=CAGE_peak_3_at_BTBD9_5end | ||
|id=chr6:38607628..38607651,- | |id=chr6:38607628..38607651,- | ||
|ontology_enrichment_celltype=CL:0000738!2.12e-25!140;CL:0000037!7.03e-17!172;CL:0000566!7.03e-17!172;CL:0002031!8.15e-17!124;CL:0002087!2.21e-16!119;CL:0000988!2.31e-15!182;CL:0002032!7.49e-15!165;CL:0000837!7.49e-15!165;CL:0000766!1.84e-13!76;CL:0000791!1.18e-10!18;CL:0000789!1.18e-10!18;CL:0002420!1.18e-10!18;CL:0002419!1.18e-10!18;CL:0000790!1.18e-10!18;CL:0002057!2.72e-10!42;CL:0000557!5.98e-10!71;CL:0000860!3.08e-09!45;CL:0000839!1.07e-08!70;CL:0002009!1.31e-08!65;CL:0000838!4.92e-08!52;CL:0000542!6.64e-08!53;CL:0000051!6.64e-08!53;CL:0002194!6.93e-08!63;CL:0000576!6.93e-08!63;CL:0000040!6.93e-08!63;CL:0000559!6.93e-08!63;CL:0000763!7.85e-08!112;CL:0000049!7.85e-08!112;CL:0000625!3.32e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.12e-25!140;CL:0000037!7.03e-17!172;CL:0000566!7.03e-17!172;CL:0002031!8.15e-17!124;CL:0002087!2.21e-16!119;CL:0000988!2.31e-15!182;CL:0002032!7.49e-15!165;CL:0000837!7.49e-15!165;CL:0000766!1.84e-13!76;CL:0000791!1.18e-10!18;CL:0000789!1.18e-10!18;CL:0002420!1.18e-10!18;CL:0002419!1.18e-10!18;CL:0000790!1.18e-10!18;CL:0002057!2.72e-10!42;CL:0000557!5.98e-10!71;CL:0000860!3.08e-09!45;CL:0000839!1.07e-08!70;CL:0002009!1.31e-08!65;CL:0000838!4.92e-08!52;CL:0000542!6.64e-08!53;CL:0000051!6.64e-08!53;CL:0002194!6.93e-08!63;CL:0000576!6.93e-08!63;CL:0000040!6.93e-08!63;CL:0000559!6.93e-08!63;CL:0000763!7.85e-08!112;CL:0000049!7.85e-08!112;CL:0000625!3.32e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.10e-15;18!CL:0000789;1.10e-15;18!CL:0002419;1.10e-15;18!CL:0000625;9.71e-11;11!CL:0000094;1.42e-09;8!CL:0000084;1.68e-09;25!CL:0000766;4.76e-09;69!CL:0000624;6.21e-08;6!CL:0000860;7.17e-08;33!CL:0002057;7.17e-08;33!CL:0002087;1.10e-07;104!CL:0000081;1.43e-07;11!CL:0000576;5.90e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.84e-32,136;CL:0000037,7.99e-23,168;CL:0002031,6.56e-22,120;CL:0000988,8.74e-21,177;CL:0002032,2.46e-20,161;CL:0000837,2.46e-20,161;CL:0002087,3.76e-20,115;CL:0000766,1.04e-16,72;CL:0000791,1.24e-15,18;CL:0000789,1.24e-15,18;CL:0002420,1.24e-15,18;CL:0002419,1.24e-15,18;CL:0000790,1.24e-15,18;CL:0000860,1.63e-12,42;CL:0002057,1.63e-12,42;CL:0000557,6.30e-12,67;CL:0000473,3.35e-11,48;CL:0000234,3.35e-11,48;CL:0000838,9.71e-11,52;CL:0000625,1.16e-10,11;CL:0000763,1.55e-10,108;CL:0000049,1.55e-10,108;CL:0000839,1.78e-10,66;CL:0000542,2.40e-10,53;CL:0000051,2.40e-10,53;CL:0000094,1.48e-09,8;CL:0002009,1.52e-09,61;CL:0000084,1.78e-09,25;CL:0000827,1.78e-09,25;CL:0002194,1.66e-08,59;CL:0000576,1.66e-08,59;CL:0000040,1.66e-08,59;CL:0000559,1.66e-08,59;CL:0000624,5.84e-08,6;CL:0000081,2.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-15;18!CL:0002057;1.89e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-18!115;UBERON:0003080!9.77e-12!42;UBERON:0002780!1.04e-11!41;UBERON:0001890!1.04e-11!41;UBERON:0006240!1.04e-11!41;UBERON:0001893!1.91e-11!34;UBERON:0001869!4.04e-11!32;UBERON:0002791!5.48e-11!33;UBERON:0002020!6.30e-11!34;UBERON:0003528!6.30e-11!34;UBERON:0001049!1.78e-10!57;UBERON:0005068!1.78e-10!57;UBERON:0006241!1.78e-10!57;UBERON:0007135!1.78e-10!57;UBERON:0002390!7.28e-10!102;UBERON:0003061!7.28e-10!102;UBERON:0002619!8.52e-10!22;UBERON:0002616!1.04e-09!59;UBERON:0001950!4.53e-09!20;UBERON:0002193!9.18e-09!112;UBERON:0000956!1.07e-08!25;UBERON:0000203!1.07e-08!25;UBERON:0001017!3.34e-08!82;UBERON:0005743!1.42e-07!86;UBERON:0001474!1.51e-07!86;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69;UBERON:0002371!1.63e-07!80;UBERON:0000073!6.36e-07!94;UBERON:0001016!6.36e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!2.69e-18!115;UBERON:0003080!9.77e-12!42;UBERON:0002780!1.04e-11!41;UBERON:0001890!1.04e-11!41;UBERON:0006240!1.04e-11!41;UBERON:0001893!1.91e-11!34;UBERON:0001869!4.04e-11!32;UBERON:0002791!5.48e-11!33;UBERON:0002020!6.30e-11!34;UBERON:0003528!6.30e-11!34;UBERON:0001049!1.78e-10!57;UBERON:0005068!1.78e-10!57;UBERON:0006241!1.78e-10!57;UBERON:0007135!1.78e-10!57;UBERON:0002390!7.28e-10!102;UBERON:0003061!7.28e-10!102;UBERON:0002619!8.52e-10!22;UBERON:0002616!1.04e-09!59;UBERON:0001950!4.53e-09!20;UBERON:0002193!9.18e-09!112;UBERON:0000956!1.07e-08!25;UBERON:0000203!1.07e-08!25;UBERON:0001017!3.34e-08!82;UBERON:0005743!1.42e-07!86;UBERON:0001474!1.51e-07!86;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69;UBERON:0002371!1.63e-07!80;UBERON:0000073!6.36e-07!94;UBERON:0001016!6.36e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.78e-13;22!UBERON:0001950;7.48e-12;20!UBERON:0002791;4.75e-11;32!UBERON:0001869;5.37e-11;32!UBERON:0001893;7.08e-11;34!UBERON:0003528;1.27e-10;34!UBERON:0002020;1.27e-10;34!UBERON:0000956;1.73e-10;25!UBERON:0000203;1.73e-10;25!UBERON:0002780;2.41e-10;41!UBERON:0001890;2.41e-10;41!UBERON:0000073;4.68e-08;53!UBERON:0002616;4.68e-08;53!UBERON:0007023;5.72e-07;114 | |||
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| ||
|short_description=p3@BTBD9 | |short_description=p3@BTBD9 | ||
}} | }} |
Latest revision as of 16:10, 18 September 2015
Short description: | p3@BTBD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BTBD9_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 0bp_to_ENST00000498633_5end |
EntrezGene: | BTBD9 |
HGNC: | 21228 |
UniProt: | C9JVC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.99e-19 | 114 |
regional part of forebrain | 5.78e-14 | 41 |
forebrain | 5.78e-14 | 41 |
anterior neural tube | 5.78e-14 | 41 |
future forebrain | 5.78e-14 | 41 |
telencephalon | 7.61e-14 | 34 |
regional part of cerebral cortex | 1.14e-13 | 22 |
cerebral hemisphere | 2.74e-13 | 32 |
hematopoietic system | 6.02e-13 | 98 |
blood island | 6.02e-13 | 98 |
regional part of telencephalon | 7.48e-13 | 32 |
neural tube | 1.28e-12 | 56 |
neural rod | 1.28e-12 | 56 |
future spinal cord | 1.28e-12 | 56 |
neural keel | 1.28e-12 | 56 |
neocortex | 1.66e-12 | 20 |
brain grey matter | 1.68e-12 | 34 |
gray matter | 1.68e-12 | 34 |
regional part of nervous system | 2.23e-12 | 53 |
regional part of brain | 2.23e-12 | 53 |
hemolymphoid system | 9.01e-12 | 108 |
cerebral cortex | 2.79e-11 | 25 |
pallium | 2.79e-11 | 25 |
immune system | 1.45e-09 | 93 |
bone marrow | 4.07e-09 | 76 |
central nervous system | 6.02e-09 | 81 |
brain | 1.02e-08 | 68 |
future brain | 1.02e-08 | 68 |
bone element | 3.04e-08 | 82 |
pre-chordal neural plate | 1.02e-07 | 61 |
neural plate | 1.39e-07 | 82 |
presumptive neural plate | 1.39e-07 | 82 |
nervous system | 1.88e-07 | 89 |
neurectoderm | 3.27e-07 | 86 |