FFCP PHASE1:Hg19::chr16:30772777..30772815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30772777..30772815,-
|short_description=p2@C16orf93
|description=CAGE_peak_2_at_C16orf93_5end
|association_with_transcript=488bp_to_ENST00000544643_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90835 | |EntrezGene=90835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28078 | |HGNC=28078 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=488bp_to_ENST00000544643_5end | |||
|cluster_id=chr16:30772777..30772815,- | |||
|description=CAGE_peak_2_at_C16orf93_5end | |||
|id=chr16:30772777..30772815,- | |||
|ontology_enrichment_celltype=CL:0000763!8.96e-17!112;CL:0000049!8.96e-17!112;CL:0000988!2.00e-12!182;CL:0000037!2.77e-12!172;CL:0000566!2.77e-12!172;CL:0000034!4.14e-12!444;CL:0000048!5.99e-12!430;CL:0000723!1.17e-11!436;CL:0002032!1.68e-10!165;CL:0000837!1.68e-10!165;CL:0000557!1.66e-09!71;CL:0000839!5.19e-09!70;CL:0000219!1.80e-08!390;CL:0002009!2.51e-08!65;CL:0000359!4.83e-08!32;CL:0000766!5.58e-08!76;CL:0000192!8.69e-08!42;CL:0000514!8.69e-08!42;CL:0002194!1.31e-07!63;CL:0000576!1.31e-07!63;CL:0000040!1.31e-07!63;CL:0000559!1.31e-07!63;CL:0000134!7.66e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.06e-10;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.82e-15,108;CL:0000049,7.82e-15,108;CL:0000037,1.61e-11,168;CL:0000988,1.96e-11,177;CL:0000359,2.03e-10,32;CL:0002032,8.07e-10,161;CL:0000837,8.07e-10,161;CL:0000034,5.37e-09,441;CL:0000723,1.78e-08,433;CL:0000048,2.10e-08,427;CL:0000192,3.24e-08,43;CL:0000514,3.24e-08,43;CL:0000557,2.33e-07,67;CL:0000393,7.73e-07,61;CL:0000211,7.73e-07,61;CL:0000839,8.53e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.49e-09!31;DOID:1240!3.90e-09!39;DOID:2531!1.82e-07!51;DOID:0060083!1.82e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.79e-11;31!DOID:1240;5.83e-09;39!DOID:2531;9.87e-07;51!DOID:0060083;9.87e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.03e-12,31;DOID:1240,4.94e-11,39;DOID:2531,1.73e-09,51;DOID:0060083,1.73e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.41e-10!167;UBERON:0001017!1.02e-08!82;UBERON:0002390!1.07e-08!102;UBERON:0003061!1.07e-08!102;UBERON:0002371!1.30e-08!80;UBERON:0001474!1.71e-08!86;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0000955!3.48e-08!69;UBERON:0006238!3.48e-08!69;UBERON:0002193!4.37e-08!112;UBERON:0005743!1.03e-07!86;UBERON:0003081!1.66e-07!216;UBERON:0001637!1.85e-07!42;UBERON:0003509!1.85e-07!42;UBERON:0004572!1.85e-07!42;UBERON:0002616!3.06e-07!59;UBERON:0002020!5.45e-07!34;UBERON:0003528!5.45e-07!34;UBERON:0002780!7.05e-07!41;UBERON:0001890!7.05e-07!41;UBERON:0006240!7.05e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.53e-09;25!UBERON:0000203;4.53e-09;25!UBERON:0001869;1.20e-08;32!UBERON:0003528;4.85e-08;34!UBERON:0002020;4.85e-08;34!UBERON:0002791;8.85e-08;32!UBERON:0002619;1.05e-07;22!UBERON:0001893;1.54e-07;34!UBERON:0000073;4.21e-07;53!UBERON:0002616;4.21e-07;53!UBERON:0002780;6.76e-07;41!UBERON:0001890;6.76e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.85e-12,81;UBERON:0001049,1.18e-11,56;UBERON:0005068,1.18e-11,56;UBERON:0006241,1.18e-11,56;UBERON:0007135,1.18e-11,56;UBERON:0000073,2.97e-11,53;UBERON:0002616,2.97e-11,53;UBERON:0000955,6.92e-11,68;UBERON:0006238,6.92e-11,68;UBERON:0001016,1.60e-10,89;UBERON:0003528,1.16e-08,34;UBERON:0002020,1.16e-08,34;UBERON:0002780,1.60e-08,41;UBERON:0001890,1.60e-08,41;UBERON:0003080,1.60e-08,41;UBERON:0006240,1.60e-08,41;UBERON:0000956,2.32e-08,25;UBERON:0000203,2.32e-08,25;UBERON:0001869,2.38e-08,32;UBERON:0001637,4.36e-08,42;UBERON:0003509,4.36e-08,42;UBERON:0004572,4.36e-08,42;UBERON:0002204,6.24e-08,167;UBERON:0003075,1.39e-07,82;UBERON:0007284,1.39e-07,82;UBERON:0001893,1.78e-07,34;UBERON:0002791,2.54e-07,32;UBERON:0002346,3.13e-07,86;UBERON:0002619,3.58e-07,22;UBERON:0004573,6.95e-07,33;UBERON:0004571,6.95e-07,33;UBERON:0001474,7.77e-07,82;UBERON:0002371,7.83e-07,76 | |||
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| ||
|short_description=p2@C16orf93 | |||
}} | }} |
Latest revision as of 09:31, 16 September 2015
Short description: | p2@C16orf93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C16orf93_5end |
Coexpression cluster: | NA |
Association with transcript: | 488bp_to_ENST00000544643_5end |
EntrezGene: | C16orf93 |
HGNC: | 28078 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.82e-15 | 108 |
common myeloid progenitor | 7.82e-15 | 108 |
hematopoietic stem cell | 1.61e-11 | 168 |
hematopoietic cell | 1.96e-11 | 177 |
vascular associated smooth muscle cell | 2.03e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.07e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.07e-10 | 161 |
stem cell | 5.37e-09 | 441 |
somatic stem cell | 1.78e-08 | 433 |
multi fate stem cell | 2.10e-08 | 427 |
smooth muscle cell | 3.24e-08 | 43 |
smooth muscle myoblast | 3.24e-08 | 43 |
granulocyte monocyte progenitor cell | 2.33e-07 | 67 |
electrically responsive cell | 7.73e-07 | 61 |
electrically active cell | 7.73e-07 | 61 |
myeloid lineage restricted progenitor cell | 8.53e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.85e-12 | 81 |
neural tube | 1.18e-11 | 56 |
neural rod | 1.18e-11 | 56 |
future spinal cord | 1.18e-11 | 56 |
neural keel | 1.18e-11 | 56 |
regional part of nervous system | 2.97e-11 | 53 |
regional part of brain | 2.97e-11 | 53 |
brain | 6.92e-11 | 68 |
future brain | 6.92e-11 | 68 |
nervous system | 1.60e-10 | 89 |
brain grey matter | 1.16e-08 | 34 |
gray matter | 1.16e-08 | 34 |
regional part of forebrain | 1.60e-08 | 41 |
forebrain | 1.60e-08 | 41 |
anterior neural tube | 1.60e-08 | 41 |
future forebrain | 1.60e-08 | 41 |
cerebral cortex | 2.32e-08 | 25 |
pallium | 2.32e-08 | 25 |
cerebral hemisphere | 2.38e-08 | 32 |
artery | 4.36e-08 | 42 |
arterial blood vessel | 4.36e-08 | 42 |
arterial system | 4.36e-08 | 42 |
musculoskeletal system | 6.24e-08 | 167 |
neural plate | 1.39e-07 | 82 |
presumptive neural plate | 1.39e-07 | 82 |
telencephalon | 1.78e-07 | 34 |
regional part of telencephalon | 2.54e-07 | 32 |
neurectoderm | 3.13e-07 | 86 |
regional part of cerebral cortex | 3.58e-07 | 22 |
systemic artery | 6.95e-07 | 33 |
systemic arterial system | 6.95e-07 | 33 |
bone element | 7.77e-07 | 82 |
bone marrow | 7.83e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.03e-12 | 31 |
leukemia | 4.94e-11 | 39 |
hematologic cancer | 1.73e-09 | 51 |
immune system cancer | 1.73e-09 | 51 |