FFCP PHASE1:Hg19::chr5:87687999..87688023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508015_5end | |association_with_transcript=0bp_to_ENST00000508015_5end | ||
|cluster_id=chr5:87687999..87688023,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_ENST00000508015_5end | |description=CAGE_peak_1_at_ENST00000508015_5end | ||
|id=chr5:87687999..87688023,+ | |id=chr5:87687999..87688023,+ | ||
|ontology_enrichment_celltype=CL:0000128!3.46e-12!7;CL:0000126!3.46e-12!7;CL:0000127!3.46e-12!7;CL:0002453!3.46e-12!7;CL:0002605!1.88e-11!3;CL:0000047!2.62e-11!8;CL:0002319!3.90e-11!25 | |ontology_enrichment_celltype=CL:0000128!3.46e-12!7;CL:0000126!3.46e-12!7;CL:0000127!3.46e-12!7;CL:0002453!3.46e-12!7;CL:0002605!1.88e-11!3;CL:0000047!2.62e-11!8;CL:0002319!3.90e-11!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.13e-25;3!CL:0002319;5.12e-19;25!CL:0000047;7.42e-18;2!CL:0000540;1.55e-13;6!CL:0000404;1.55e-13;6!CL:0000128;2.40e-11;7!CL:0000126;2.40e-11;7!CL:0000127;2.40e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.42e-26,8;CL:0002605,1.23e-25,3;CL:0002319,5.18e-19,25;CL:0000540,1.52e-13,6;CL:0000031,1.52e-13,6;CL:0000404,1.52e-13,6;CL:0000128,2.49e-11,7;CL:0000126,2.49e-11,7;CL:0000127,2.49e-11,7;CL:0002453,2.49e-11,7;CL:0000133,7.86e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.74e-25;3!CL:0000031;1.55e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-85!57;UBERON:0005068!1.14e-85!57;UBERON:0006241!1.14e-85!57;UBERON:0007135!1.14e-85!57;UBERON:0001017!1.83e-84!82;UBERON:0005743!9.29e-84!86;UBERON:0000073!6.57e-75!94;UBERON:0001016!6.57e-75!94;UBERON:0002616!3.86e-74!59;UBERON:0000955!3.00e-68!69;UBERON:0006238!3.00e-68!69;UBERON:0002020!5.49e-67!34;UBERON:0003528!5.49e-67!34;UBERON:0003075!5.94e-63!86;UBERON:0007284!5.94e-63!86;UBERON:0002346!1.21e-62!90;UBERON:0001893!6.07e-62!34;UBERON:0001869!4.66e-61!32;UBERON:0002791!2.85e-59!33;UBERON:0002780!2.09e-58!41;UBERON:0001890!2.09e-58!41;UBERON:0006240!2.09e-58!41;UBERON:0003080!7.23e-57!42;UBERON:0000956!4.16e-51!25;UBERON:0000203!4.16e-51!25;UBERON:0000924!2.20e-43!173;UBERON:0006601!2.20e-43!173;UBERON:0003056!5.78e-43!61;UBERON:0004121!8.81e-43!169;UBERON:0002619!8.36e-42!22;UBERON:0000033!1.20e-40!123;UBERON:0000153!2.72e-38!129;UBERON:0007811!2.72e-38!129;UBERON:0001950!5.53e-36!20;UBERON:0007023!2.92e-29!115;UBERON:0003076!3.89e-29!15;UBERON:0003057!3.89e-29!15;UBERON:0004733!7.34e-26!12;UBERON:0002028!7.34e-26!12;UBERON:0007277!7.34e-26!12;UBERON:0004732!1.04e-23!13;UBERON:0000025!2.59e-18!194;UBERON:0002680!2.13e-17!9;UBERON:0001895!2.13e-17!9;UBERON:0010092!2.13e-17!9;UBERON:0002420!2.24e-17!9;UBERON:0007245!2.24e-17!9;UBERON:0010009!2.24e-17!9;UBERON:0010011!2.24e-17!9;UBERON:0000454!2.24e-17!9;UBERON:0002308!6.25e-17!9;UBERON:0000125!6.25e-17!9;UBERON:0000349!6.54e-17!5;UBERON:0001871!9.74e-15!7;UBERON:0002298!3.18e-14!8;UBERON:0000064!3.60e-14!219;UBERON:0002037!4.49e-14!6;UBERON:0006215!4.49e-14!6;UBERON:0000200!6.87e-13!6;UBERON:0004111!7.59e-13!241;UBERON:0009663!1.38e-11!7;UBERON:0000483!8.03e-11!309;UBERON:0002021!9.43e-11!5;UBERON:0000119!1.28e-10!312;UBERON:0001872!1.28e-10!5;UBERON:0001896!1.68e-10!3;UBERON:0005290!1.68e-10!3;UBERON:0010096!1.68e-10!3;UBERON:0006331!2.11e-10!3;UBERON:0002771!2.92e-10!3;UBERON:0000477!4.17e-10!286;UBERON:0000475!3.28e-08!365;UBERON:0001876!5.11e-08!2;UBERON:0000369!6.80e-08!4;UBERON:0002435!6.80e-08!4;UBERON:0000204!6.80e-08!4;UBERON:0010082!6.80e-08!4;UBERON:0001954!7.70e-08!2;UBERON:0003022!7.70e-08!2;UBERON:0002421!7.70e-08!2;UBERON:0002600!7.70e-08!2;UBERON:0002148!2.02e-07!2;UBERON:0009662!2.02e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-85!57;UBERON:0005068!1.14e-85!57;UBERON:0006241!1.14e-85!57;UBERON:0007135!1.14e-85!57;UBERON:0001017!1.83e-84!82;UBERON:0005743!9.29e-84!86;UBERON:0000073!6.57e-75!94;UBERON:0001016!6.57e-75!94;UBERON:0002616!3.86e-74!59;UBERON:0000955!3.00e-68!69;UBERON:0006238!3.00e-68!69;UBERON:0002020!5.49e-67!34;UBERON:0003528!5.49e-67!34;UBERON:0003075!5.94e-63!86;UBERON:0007284!5.94e-63!86;UBERON:0002346!1.21e-62!90;UBERON:0001893!6.07e-62!34;UBERON:0001869!4.66e-61!32;UBERON:0002791!2.85e-59!33;UBERON:0002780!2.09e-58!41;UBERON:0001890!2.09e-58!41;UBERON:0006240!2.09e-58!41;UBERON:0003080!7.23e-57!42;UBERON:0000956!4.16e-51!25;UBERON:0000203!4.16e-51!25;UBERON:0000924!2.20e-43!173;UBERON:0006601!2.20e-43!173;UBERON:0003056!5.78e-43!61;UBERON:0004121!8.81e-43!169;UBERON:0002619!8.36e-42!22;UBERON:0000033!1.20e-40!123;UBERON:0000153!2.72e-38!129;UBERON:0007811!2.72e-38!129;UBERON:0001950!5.53e-36!20;UBERON:0007023!2.92e-29!115;UBERON:0003076!3.89e-29!15;UBERON:0003057!3.89e-29!15;UBERON:0004733!7.34e-26!12;UBERON:0002028!7.34e-26!12;UBERON:0007277!7.34e-26!12;UBERON:0004732!1.04e-23!13;UBERON:0000025!2.59e-18!194;UBERON:0002680!2.13e-17!9;UBERON:0001895!2.13e-17!9;UBERON:0010092!2.13e-17!9;UBERON:0002420!2.24e-17!9;UBERON:0007245!2.24e-17!9;UBERON:0010009!2.24e-17!9;UBERON:0010011!2.24e-17!9;UBERON:0000454!2.24e-17!9;UBERON:0002308!6.25e-17!9;UBERON:0000125!6.25e-17!9;UBERON:0000349!6.54e-17!5;UBERON:0001871!9.74e-15!7;UBERON:0002298!3.18e-14!8;UBERON:0000064!3.60e-14!219;UBERON:0002037!4.49e-14!6;UBERON:0006215!4.49e-14!6;UBERON:0000200!6.87e-13!6;UBERON:0004111!7.59e-13!241;UBERON:0009663!1.38e-11!7;UBERON:0000483!8.03e-11!309;UBERON:0002021!9.43e-11!5;UBERON:0000119!1.28e-10!312;UBERON:0001872!1.28e-10!5;UBERON:0001896!1.68e-10!3;UBERON:0005290!1.68e-10!3;UBERON:0010096!1.68e-10!3;UBERON:0006331!2.11e-10!3;UBERON:0002771!2.92e-10!3;UBERON:0000477!4.17e-10!286;UBERON:0000475!3.28e-08!365;UBERON:0001876!5.11e-08!2;UBERON:0000369!6.80e-08!4;UBERON:0002435!6.80e-08!4;UBERON:0000204!6.80e-08!4;UBERON:0010082!6.80e-08!4;UBERON:0001954!7.70e-08!2;UBERON:0003022!7.70e-08!2;UBERON:0002421!7.70e-08!2;UBERON:0002600!7.70e-08!2;UBERON:0002148!2.02e-07!2;UBERON:0009662!2.02e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.11e-30;25!UBERON:0000203;2.11e-30;25!UBERON:0002791;8.15e-23;32!UBERON:0001869;1.06e-22;32!UBERON:0003528;4.48e-20;34!UBERON:0002020;4.48e-20;34!UBERON:0001893;1.46e-19;34!UBERON:0000073;1.41e-18;53!UBERON:0002616;1.41e-18;53!UBERON:0001876;2.52e-17;2!UBERON:0002619;5.43e-17;22!UBERON:0002780;2.71e-15;41!UBERON:0001890;2.71e-15;41!UBERON:0000349;2.99e-15;5!UBERON:0001950;6.45e-14;20!UBERON:0000955;4.96e-13;68!UBERON:0001016;6.72e-13;83!UBERON:0002037;1.04e-12;6!UBERON:0001871;2.86e-11;6!UBERON:0004733;5.35e-11;12!UBERON:0002028;5.35e-11;12!UBERON:0004732;3.63e-10;13!UBERON:0001017;1.24e-09;75!UBERON:0003112;1.99e-09;1!UBERON:0011158;1.99e-09;1!UBERON:0003128;1.99e-09;1!UBERON:0001703;1.99e-09;1!UBERON:0002241;1.99e-09;1!UBERON:0002680;1.19e-08;9!UBERON:0001895;1.19e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.38e-37,81;UBERON:0001016,7.59e-33,89;UBERON:0000956,2.72e-30,25;UBERON:0000203,2.72e-30,25;UBERON:0000073,1.97e-27,53;UBERON:0002616,1.97e-27,53;UBERON:0001049,7.30e-26,56;UBERON:0005068,7.30e-26,56;UBERON:0006241,7.30e-26,56;UBERON:0007135,7.30e-26,56;UBERON:0000955,7.20e-24,68;UBERON:0006238,7.20e-24,68;UBERON:0002791,1.50e-23,32;UBERON:0001869,1.50e-23,32;UBERON:0003528,4.04e-22,34;UBERON:0002020,4.04e-22,34;UBERON:0001893,4.04e-22,34;UBERON:0002780,3.51e-18,41;UBERON:0001890,3.51e-18,41;UBERON:0003080,3.51e-18,41;UBERON:0006240,3.51e-18,41;UBERON:0001876,2.85e-17,2;UBERON:0003075,5.21e-17,82;UBERON:0007284,5.21e-17,82;UBERON:0002619,6.46e-17,22;UBERON:0002346,4.08e-16,86;UBERON:0004121,8.20e-16,171;UBERON:0000924,8.20e-16,171;UBERON:0006601,8.20e-16,171;UBERON:0000349,3.83e-15,5;UBERON:0011216,2.74e-14,223;UBERON:0001950,6.99e-14,20;UBERON:0010371,6.17e-13,104;UBERON:0002037,7.99e-13,6;UBERON:0006215,7.99e-13,6;UBERON:0003056,8.08e-12,61;UBERON:0010314,2.76e-11,132;UBERON:0001871,3.07e-11,6;UBERON:0004733,4.32e-11,12;UBERON:0002028,4.32e-11,12;UBERON:0007277,4.32e-11,12;UBERON:0004732,2.98e-10,13;UBERON:0003112,2.08e-09,1;UBERON:0011158,2.08e-09,1;UBERON:0003128,2.08e-09,1;UBERON:0001703,2.08e-09,1;UBERON:0002241,2.08e-09,1;UBERON:0004761,2.08e-09,1;UBERON:0009617,2.08e-09,1;UBERON:0003076,6.59e-09,15;UBERON:0003057,6.59e-09,15;UBERON:0002680,1.00e-08,9;UBERON:0001895,1.00e-08,9;UBERON:0010092,1.00e-08,9 | |||
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|short_description=p1@ENST00000508015 | |short_description=p1@ENST00000508015 | ||
}} | }} |
Latest revision as of 17:04, 30 July 2015
Short description: | p1@ENST00000508015 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000508015_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000508015_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.42e-26 | 8 |
astrocyte of the cerebral cortex | 1.23e-25 | 3 |
neural cell | 5.18e-19 | 25 |
neuron | 1.52e-13 | 6 |
neuroblast | 1.52e-13 | 6 |
electrically signaling cell | 1.52e-13 | 6 |
oligodendrocyte | 2.49e-11 | 7 |
macroglial cell | 2.49e-11 | 7 |
astrocyte | 2.49e-11 | 7 |
oligodendrocyte precursor cell | 2.49e-11 | 7 |
neurectodermal cell | 7.86e-08 | 59 |