FFCP PHASE1:Hg19::chr6:24910924..24910970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:24910924..24910970,- | |||
|description=CAGE_peak_at_chr6:24910924..24910970,- | |description=CAGE_peak_at_chr6:24910924..24910970,- | ||
|id=chr6:24910924..24910970,- | |id=chr6:24910924..24910970,- | ||
|ontology_enrichment_celltype=CL:0000945!1.52e-18!24;CL:0000826!1.52e-18!24;CL:0000236!7.18e-12!14;CL:0000542!2.61e-10!53;CL:0000051!2.61e-10!53;CL:0000838!1.24e-09!52 | |ontology_enrichment_celltype=CL:0000945!1.52e-18!24;CL:0000826!1.52e-18!24;CL:0000236!7.18e-12!14;CL:0000542!2.61e-10!53;CL:0000051!2.61e-10!53;CL:0000838!1.24e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.23e-34;24!CL:0000236;1.43e-23;13!CL:0000542;3.40e-12;53!CL:0000785;2.16e-10;1!CL:0000819;2.16e-10;1!CL:0000946;6.61e-10;1!CL:0000786;6.61e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.64e-34,24;CL:0000826,1.64e-34,24;CL:0000236,2.30e-29,14;CL:0000785,2.65e-18,2;CL:0000955,2.65e-18,2;CL:0000818,2.65e-18,2;CL:0000954,2.65e-18,2;CL:0000816,2.65e-18,2;CL:0000838,3.89e-15,52;CL:0000542,8.03e-15,53;CL:0000051,8.03e-15,53;CL:0000817,1.59e-12,3;CL:0000819,2.16e-10,1;CL:0000946,1.17e-09,1;CL:0000786,1.17e-09,1;CL:0000980,1.17e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000954;1.49e-18;2!UBERON:0010122;4.48e-18;2!CL:0000051;3.40e-12;53!UBERON:0001045;1.80e-10;1!UBERON:0005425;6.61e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.82e-14;10!DOID:0060073;2.16e-10;1!DOID:8675;2.16e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.89e-14,10;DOID:0060073,2.16e-10,1;DOID:8675,2.16e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;3.84e-35;4!UBERON:0002435;3.84e-35;4!UBERON:0000204;3.84e-35;4!UBERON:0002420;1.67e-34;9!UBERON:0007245;1.67e-34;9!UBERON:0010009;1.67e-34;9!UBERON:0010011;1.67e-34;9!UBERON:0000454;1.67e-34;9!UBERON:0009663;6.38e-31;7!UBERON:0005383;1.12e-26;3!UBERON:0005382;1.12e-26;3!UBERON:0000125;4.74e-24;9!UBERON:0002308;4.74e-24;9!UBERON:0001873;4.48e-18;2!UBERON:0002791;4.17e-15;32!UBERON:0003528;2.36e-14;34!UBERON:0002020;2.36e-14;34!UBERON:0001869;2.43e-14;32!UBERON:0001893;5.69e-13;34!UBERON:0001154;1.80e-10;1!UBERON:0001153;1.80e-10;1!UBERON:0009854;1.80e-10;1!UBERON:0001874;2.16e-10;1!UBERON:0001882;2.97e-10;1!UBERON:0002372;2.97e-10;1!UBERON:0001961;2.97e-10;1!UBERON:0001744;2.97e-10;1!UBERON:0001042;2.97e-10;1!UBERON:0005403;2.97e-10;1!UBERON:0001735;2.97e-10;1!UBERON:0002022;6.61e-10;1!UBERON:0000941;6.61e-10;1!UBERON:0001785;6.61e-10;1!UBERON:0002464;6.61e-10;1!UBERON:0004904;6.61e-10;1!UBERON:0001021;6.61e-10;1!UBERON:0002780;1.59e-09;41!UBERON:0001890;1.59e-09;41!UBERON:0000349;4.22e-08;5!UBERON:0000073;5.30e-07;53!UBERON:0002616;5.30e-07;53!UBERON:0000955;5.58e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.82e-35,4;UBERON:0002435,1.82e-35,4;UBERON:0000204,1.82e-35,4;UBERON:0010082,1.82e-35,4;UBERON:0002420,1.12e-34,9;UBERON:0007245,1.12e-34,9;UBERON:0010009,1.12e-34,9;UBERON:0010011,1.12e-34,9;UBERON:0000454,1.12e-34,9;UBERON:0009663,4.40e-31,7;UBERON:0005383,4.64e-27,3;UBERON:0005382,4.64e-27,3;UBERON:0000125,3.56e-24,9;UBERON:0002308,3.56e-24,9;UBERON:0001873,1.71e-18,2;UBERON:0010122,1.71e-18,2;UBERON:0002791,6.39e-16,32;UBERON:0001869,6.39e-16,32;UBERON:0003528,5.92e-15,34;UBERON:0002020,5.92e-15,34;UBERON:0001893,5.92e-15,34;UBERON:0002780,2.71e-12,41;UBERON:0001890,2.71e-12,41;UBERON:0003080,2.71e-12,41;UBERON:0006240,2.71e-12,41;UBERON:0000073,8.66e-12,53;UBERON:0002616,8.66e-12,53;UBERON:0001049,4.22e-11,56;UBERON:0005068,4.22e-11,56;UBERON:0006241,4.22e-11,56;UBERON:0007135,4.22e-11,56;UBERON:0007023,1.04e-10,114;UBERON:0001154,1.80e-10,1;UBERON:0001153,1.80e-10,1;UBERON:0001045,1.80e-10,1;UBERON:0001874,2.37e-10,1;UBERON:0002372,2.84e-10,1;UBERON:0001961,2.84e-10,1;UBERON:0001744,2.84e-10,1;UBERON:0001735,2.84e-10,1;UBERON:0001882,3.40e-10,1;UBERON:0005403,3.40e-10,1;UBERON:0003056,4.26e-10,61;UBERON:0002022,4.85e-10,1;UBERON:0000941,6.33e-10,1;UBERON:0001785,6.33e-10,1;UBERON:0002464,6.33e-10,1;UBERON:0004904,6.33e-10,1;UBERON:0001021,6.33e-10,1;UBERON:0003902,6.33e-10,1;UBERON:0005425,6.33e-10,1;UBERON:0003075,6.08e-09,82;UBERON:0007284,6.08e-09,82;UBERON:0000955,8.43e-09,68;UBERON:0006238,8.43e-09,68;UBERON:0002346,1.84e-08,86;UBERON:0000349,4.30e-08,5;UBERON:0001016,6.43e-08,89;UBERON:0001017,3.21e-07,81;UBERON:0010371,9.50e-07,104 | |||
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|short_description=p@chr6:24910924..24910970,- | |short_description=p@chr6:24910924..24910970,- | ||
}} | }} |
Latest revision as of 22:48, 30 July 2015
Short description: | p@chr6:24910924..24910970, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:24910924..24910970, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.64e-34 | 24 |
pro-B cell | 1.64e-34 | 24 |
B cell | 2.30e-29 | 14 |
mature B cell | 2.65e-18 | 2 |
pre-B-II cell | 2.65e-18 | 2 |
transitional stage B cell | 2.65e-18 | 2 |
small pre-B-II cell | 2.65e-18 | 2 |
immature B cell | 2.65e-18 | 2 |
lymphoid lineage restricted progenitor cell | 3.89e-15 | 52 |
lymphocyte | 8.03e-15 | 53 |
common lymphoid progenitor | 8.03e-15 | 53 |
precursor B cell | 1.59e-12 | 3 |
B-1 B cell | 2.16e-10 | 1 |
antibody secreting cell | 1.17e-09 | 1 |
plasma cell | 1.17e-09 | 1 |
plasmablast | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.89e-14 | 10 |
lymphatic system cancer | 2.16e-10 | 1 |
lymphosarcoma | 2.16e-10 | 1 |