FFCP PHASE1:Hg19::chr8:49647808..49647873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79645 | |EntrezGene=79645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25678 | |HGNC=25678 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAE3 | |UniProt=Q9HAE3 | ||
|association_with_transcript=0bp_to_ENST00000433756,ENST00000521701,ENST00000521721,ENST00000523092,NM_001142857,NM_024593,NR_024605,uc003xqn.3,uc003xqo.2,uc010lxx.2,uc011ldj.1,uc011ldk.1_5end | |association_with_transcript=0bp_to_ENST00000433756,ENST00000521701,ENST00000521721,ENST00000523092,NM_001142857,NM_024593,NR_024605,uc003xqn.3,uc003xqo.2,uc010lxx.2,uc011ldj.1,uc011ldk.1_5end | ||
|cluster_id=chr8:49647808..49647873,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_EFCAB1_5end | |description=CAGE_peak_1_at_EFCAB1_5end | ||
|id=chr8:49647808..49647873,- | |id=chr8:49647808..49647873,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.49e-27!169;UBERON:0000924!2.82e-26!173;UBERON:0006601!2.82e-26!173;UBERON:0007023!1.01e-24!115;UBERON:0001049!1.87e-24!57;UBERON:0005068!1.87e-24!57;UBERON:0006241!1.87e-24!57;UBERON:0007135!1.87e-24!57;UBERON:0000073!6.41e-24!94;UBERON:0001016!6.41e-24!94;UBERON:0001017!9.95e-23!82;UBERON:0002616!1.75e-22!59;UBERON:0005743!3.08e-22!86;UBERON:0003075!8.18e-22!86;UBERON:0007284!8.18e-22!86;UBERON:0000153!1.62e-21!129;UBERON:0007811!1.62e-21!129;UBERON:0000033!3.75e-21!123;UBERON:0002346!6.33e-21!90;UBERON:0000955!3.17e-20!69;UBERON:0006238!3.17e-20!69;UBERON:0003080!5.48e-20!42;UBERON:0002780!1.24e-19!41;UBERON:0001890!1.24e-19!41;UBERON:0006240!1.24e-19!41;UBERON:0003056!1.64e-17!61;UBERON:0002020!9.19e-16!34;UBERON:0003528!9.19e-16!34;UBERON:0001893!1.31e-15!34;UBERON:0000475!1.35e-15!365;UBERON:0002791!3.80e-15!33;UBERON:0001869!2.48e-14!32;UBERON:0000468!3.32e-13!659;UBERON:0000922!9.31e-13!612;UBERON:0002619!2.06e-12!22;UBERON:0000956!6.65e-12!25;UBERON:0000203!6.65e-12!25;UBERON:0002050!1.22e-11!605;UBERON:0005423!1.22e-11!605;UBERON:0000923!2.95e-11!604;UBERON:0005291!2.95e-11!604;UBERON:0006598!2.95e-11!604;UBERON:0002532!2.95e-11!604;UBERON:0001950!4.48e-11!20;UBERON:0000467!1.52e-10!625;UBERON:0000480!2.23e-10!626;UBERON:0000481!2.45e-10!347;UBERON:0000062!4.39e-10!511;UBERON:0000064!1.24e-09!219;UBERON:0000483!9.93e-09!309;UBERON:0000119!1.15e-08!312 | |ontology_enrichment_uberon=UBERON:0004121!8.49e-27!169;UBERON:0000924!2.82e-26!173;UBERON:0006601!2.82e-26!173;UBERON:0007023!1.01e-24!115;UBERON:0001049!1.87e-24!57;UBERON:0005068!1.87e-24!57;UBERON:0006241!1.87e-24!57;UBERON:0007135!1.87e-24!57;UBERON:0000073!6.41e-24!94;UBERON:0001016!6.41e-24!94;UBERON:0001017!9.95e-23!82;UBERON:0002616!1.75e-22!59;UBERON:0005743!3.08e-22!86;UBERON:0003075!8.18e-22!86;UBERON:0007284!8.18e-22!86;UBERON:0000153!1.62e-21!129;UBERON:0007811!1.62e-21!129;UBERON:0000033!3.75e-21!123;UBERON:0002346!6.33e-21!90;UBERON:0000955!3.17e-20!69;UBERON:0006238!3.17e-20!69;UBERON:0003080!5.48e-20!42;UBERON:0002780!1.24e-19!41;UBERON:0001890!1.24e-19!41;UBERON:0006240!1.24e-19!41;UBERON:0003056!1.64e-17!61;UBERON:0002020!9.19e-16!34;UBERON:0003528!9.19e-16!34;UBERON:0001893!1.31e-15!34;UBERON:0000475!1.35e-15!365;UBERON:0002791!3.80e-15!33;UBERON:0001869!2.48e-14!32;UBERON:0000468!3.32e-13!659;UBERON:0000922!9.31e-13!612;UBERON:0002619!2.06e-12!22;UBERON:0000956!6.65e-12!25;UBERON:0000203!6.65e-12!25;UBERON:0002050!1.22e-11!605;UBERON:0005423!1.22e-11!605;UBERON:0000923!2.95e-11!604;UBERON:0005291!2.95e-11!604;UBERON:0006598!2.95e-11!604;UBERON:0002532!2.95e-11!604;UBERON:0001950!4.48e-11!20;UBERON:0000467!1.52e-10!625;UBERON:0000480!2.23e-10!626;UBERON:0000481!2.45e-10!347;UBERON:0000062!4.39e-10!511;UBERON:0000064!1.24e-09!219;UBERON:0000483!9.93e-09!309;UBERON:0000119!1.15e-08!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.85e-21;41!UBERON:0001890;6.85e-21;41!UBERON:0003528;4.90e-20;34!UBERON:0002020;4.90e-20;34!UBERON:0001893;1.87e-19;34!UBERON:0002791;6.02e-19;32!UBERON:0001869;8.99e-19;32!UBERON:0000073;3.10e-18;53!UBERON:0002616;3.10e-18;53!UBERON:0002619;1.36e-17;22!UBERON:0000956;1.58e-17;25!UBERON:0000203;1.58e-17;25!UBERON:0001950;1.58e-15;20!UBERON:0000955;3.74e-12;68!UBERON:0001017;1.01e-10;75!UBERON:0001016;2.10e-10;83!UBERON:0001894;8.41e-08;7!UBERON:0007023;8.92e-08;114!UBERON:0001871;1.33e-07;6!UBERON:0002298;1.39e-07;6 | |||
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| ||
|short_description=p1@EFCAB1 | |short_description=p1@EFCAB1 | ||
}} | }} |
Latest revision as of 10:28, 18 September 2015
Short description: | p1@EFCAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFCAB1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000433756, ENST00000521701, ENST00000521721, ENST00000523092, NM_001142857, NM_024593, NR_024605, uc003xqn.3, uc003xqo.2, uc010lxx.2, uc011ldj.1, uc011ldk.1_5end |
EntrezGene: | EFCAB1 |
HGNC: | 25678 |
UniProt: | Q9HAE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data