FFCP PHASE1:Hg19::chr16:103816..103900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79622 | |EntrezGene=79622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14161 | |HGNC=14161 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV90,B8ZZ06 | |UniProt=Q9BV90,B8ZZ06 | ||
|association_with_transcript=0bp_to_ENST00000383018,ENST00000397876,ENST00000417493,ENST00000493672,NM_024571,uc002cfj.3_5end | |association_with_transcript=0bp_to_ENST00000383018,ENST00000397876,ENST00000417493,ENST00000493672,NM_024571,uc002cfj.3_5end | ||
|cluster_id=chr16:103816..103900,+ | |||
|description=CAGE_peak_1_at_SNRNP25_5end | |description=CAGE_peak_1_at_SNRNP25_5end | ||
|id=chr16:103816..103900,+ | |id=chr16:103816..103900,+ | ||
|ontology_enrichment_celltype=CL:0000183!3.49e-08!59;CL:0000222!4.60e-08!119;CL:0000393!6.38e-08!60;CL:0000211!6.38e-08!60;CL:0000187!4.94e-07!54 | |ontology_enrichment_celltype=CL:0000183!3.49e-08!59;CL:0000222!4.60e-08!119;CL:0000393!6.38e-08!60;CL:0000211!6.38e-08!60;CL:0000187!4.94e-07!54 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.15e-08,121;CL:0000393,1.04e-07,61;CL:0000211,1.04e-07,61;CL:0000187,7.97e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.86e-12!51;DOID:0060083!5.86e-12!51;DOID:1240!9.76e-11!39;DOID:8692!2.15e-10!31 | |ontology_enrichment_disease=DOID:2531!5.86e-12!51;DOID:0060083!5.86e-12!51;DOID:1240!9.76e-11!39;DOID:8692!2.15e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.83e-10;31!DOID:1240;5.17e-09;39!DOID:2531;8.58e-08;51!DOID:0060083;8.58e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.86e-12,51;DOID:0060083,5.86e-12,51;DOID:1240,9.76e-11,39;DOID:8692,2.15e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0000025!2.26e-15!194;UBERON:0000119!2.45e-15!312;UBERON:0000483!4.28e-15!309;UBERON:0000477!2.83e-11!286;UBERON:0000481!1.58e-10!347;UBERON:0003075!3.20e-10!86;UBERON:0007284!3.20e-10!86;UBERON:0004111!1.15e-09!241;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0000064!1.54e-09!219;UBERON:0002346!2.75e-09!90;UBERON:0002020!1.10e-08!34;UBERON:0003528!1.10e-08!34;UBERON:0002616!1.39e-08!59;UBERON:0001869!1.89e-08!32;UBERON:0001017!2.01e-08!82;UBERON:0000955!2.73e-08!69;UBERON:0006238!2.73e-08!69;UBERON:0003914!3.81e-08!118;UBERON:0005743!5.69e-08!86;UBERON:0001893!7.34e-08!34;UBERON:0003056!7.85e-08!61;UBERON:0000475!8.36e-08!365;UBERON:0004290!9.31e-08!70;UBERON:0002791!1.71e-07!33;UBERON:0001981!2.07e-07!60;UBERON:0007500!2.07e-07!60;UBERON:0004537!2.07e-07!60;UBERON:0006965!2.07e-07!60;UBERON:0000914!2.26e-07!83;UBERON:0002329!2.26e-07!83;UBERON:0003077!2.26e-07!83;UBERON:0003059!2.26e-07!83;UBERON:0007282!2.26e-07!83;UBERON:0009618!2.26e-07!83;UBERON:0007285!2.26e-07!83;UBERON:0004872!2.53e-07!84;UBERON:0002780!3.22e-07!41;UBERON:0001890!3.22e-07!41;UBERON:0006240!3.22e-07!41;UBERON:0001134!4.09e-07!61;UBERON:0002036!4.09e-07!61;UBERON:0003082!4.09e-07!61;UBERON:0001737!6.45e-07!9;UBERON:0003080!7.53e-07!42 | |ontology_enrichment_uberon=UBERON:0000025!2.26e-15!194;UBERON:0000119!2.45e-15!312;UBERON:0000483!4.28e-15!309;UBERON:0000477!2.83e-11!286;UBERON:0000481!1.58e-10!347;UBERON:0003075!3.20e-10!86;UBERON:0007284!3.20e-10!86;UBERON:0004111!1.15e-09!241;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0000064!1.54e-09!219;UBERON:0002346!2.75e-09!90;UBERON:0002020!1.10e-08!34;UBERON:0003528!1.10e-08!34;UBERON:0002616!1.39e-08!59;UBERON:0001869!1.89e-08!32;UBERON:0001017!2.01e-08!82;UBERON:0000955!2.73e-08!69;UBERON:0006238!2.73e-08!69;UBERON:0003914!3.81e-08!118;UBERON:0005743!5.69e-08!86;UBERON:0001893!7.34e-08!34;UBERON:0003056!7.85e-08!61;UBERON:0000475!8.36e-08!365;UBERON:0004290!9.31e-08!70;UBERON:0002791!1.71e-07!33;UBERON:0001981!2.07e-07!60;UBERON:0007500!2.07e-07!60;UBERON:0004537!2.07e-07!60;UBERON:0006965!2.07e-07!60;UBERON:0000914!2.26e-07!83;UBERON:0002329!2.26e-07!83;UBERON:0003077!2.26e-07!83;UBERON:0003059!2.26e-07!83;UBERON:0007282!2.26e-07!83;UBERON:0009618!2.26e-07!83;UBERON:0007285!2.26e-07!83;UBERON:0004872!2.53e-07!84;UBERON:0002780!3.22e-07!41;UBERON:0001890!3.22e-07!41;UBERON:0006240!3.22e-07!41;UBERON:0001134!4.09e-07!61;UBERON:0002036!4.09e-07!61;UBERON:0003082!4.09e-07!61;UBERON:0001737!6.45e-07!9;UBERON:0003080!7.53e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.54e-08;32!UBERON:0003528;1.02e-07;34!UBERON:0002020;1.02e-07;34!UBERON:0001893;1.98e-07;34!UBERON:0002791;2.34e-07;32!UBERON:0001737;6.43e-07;9!UBERON:0001557;6.43e-07;9 | |||
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| ||
|short_description=p1@SNRNP25 | |short_description=p1@SNRNP25 | ||
}} | }} |
Latest revision as of 04:21, 20 September 2015
Short description: | p1@SNRNP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNRNP25_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383018, ENST00000397876, ENST00000417493, ENST00000493672, NM_024571, uc002cfj.3_5end |
EntrezGene: | SNRNP25 |
HGNC: | 14161 |
UniProt: | Q9BV90B8ZZ06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.15e-08 | 121 |
electrically responsive cell | 1.04e-07 | 61 |
electrically active cell | 1.04e-07 | 61 |
muscle cell | 7.97e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.86e-12 | 51 |
immune system cancer | 5.86e-12 | 51 |
leukemia | 9.76e-11 | 39 |
myeloid leukemia | 2.15e-10 | 31 |