FFCP PHASE1:Hg19::chr17:2240963..2240989,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:2240963..2240989,+
|short_description=p4@SGSM2
|description=CAGE_peak_4_at_SGSM2_5end
|association_with_transcript=155bp_to_NM_001098509_5end
|EntrezGene...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9905 | |EntrezGene=9905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29026 | |HGNC=29026 | ||
|TSSclassifier=strong | |||
|UniProt=B9A6J3,O43147 | |UniProt=B9A6J3,O43147 | ||
|association_with_transcript=155bp_to_NM_001098509_5end | |||
|cluster_id=chr17:2240963..2240989,+ | |||
|description=CAGE_peak_4_at_SGSM2_5end | |||
|id=chr17:2240963..2240989,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.13e-09;5!CL:0000047;1.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.96e-09,5;CL:0001029,2.96e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-08;82!UBERON:0010122;3.84e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.62e-17!82;UBERON:0002780!9.70e-17!41;UBERON:0001890!9.70e-17!41;UBERON:0006240!9.70e-17!41;UBERON:0001049!2.64e-16!57;UBERON:0005068!2.64e-16!57;UBERON:0006241!2.64e-16!57;UBERON:0007135!2.64e-16!57;UBERON:0003080!6.67e-16!42;UBERON:0005743!1.18e-15!86;UBERON:0000955!2.36e-15!69;UBERON:0006238!2.36e-15!69;UBERON:0002616!4.62e-15!59;UBERON:0000073!1.08e-13!94;UBERON:0001016!1.08e-13!94;UBERON:0001869!2.54e-13!32;UBERON:0003075!6.88e-13!86;UBERON:0007284!6.88e-13!86;UBERON:0003056!9.48e-13!61;UBERON:0001893!1.07e-12!34;UBERON:0002020!2.20e-12!34;UBERON:0003528!2.20e-12!34;UBERON:0000153!2.25e-12!129;UBERON:0007811!2.25e-12!129;UBERON:0002346!2.93e-12!90;UBERON:0002791!4.76e-12!33;UBERON:0000033!6.45e-12!123;UBERON:0004121!4.29e-11!169;UBERON:0000924!8.54e-11!173;UBERON:0006601!8.54e-11!173;UBERON:0001950!1.81e-10!20;UBERON:0000956!2.84e-10!25;UBERON:0000203!2.84e-10!25;UBERON:0002619!5.04e-10!22;UBERON:0007023!2.91e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.72e-36;32!UBERON:0001950;4.15e-35;20!UBERON:0001893;3.19e-34;34!UBERON:0002791;3.77e-34;32!UBERON:0002619;1.11e-31;22!UBERON:0002780;1.19e-30;41!UBERON:0001890;1.19e-30;41!UBERON:0003528;6.22e-30;34!UBERON:0002020;6.22e-30;34!UBERON:0000956;1.56e-27;25!UBERON:0000203;1.56e-27;25!UBERON:0000073;2.98e-20;53!UBERON:0002616;2.98e-20;53!UBERON:0000200;2.20e-19;6!UBERON:0001017;1.25e-15;75!UBERON:0000955;7.50e-15;68!UBERON:0000369;3.77e-13;4!UBERON:0002435;3.77e-13;4!UBERON:0000204;3.77e-13;4!UBERON:0002420;2.93e-12;9!UBERON:0007245;2.93e-12;9!UBERON:0010009;2.93e-12;9!UBERON:0010011;2.93e-12;9!UBERON:0000454;2.93e-12;9!UBERON:0001871;1.35e-11;6!UBERON:0009663;4.17e-11;7!UBERON:0001870;1.69e-10;3!UBERON:0005383;3.07e-10;3!UBERON:0005382;3.07e-10;3!UBERON:0002021;3.10e-10;5!UBERON:0001016;3.77e-10;83!UBERON:0000125;1.49e-08;9!UBERON:0002308;1.49e-08;9!UBERON:0002702;5.93e-08;2!UBERON:0002771;1.10e-07;2!UBERON:0003296;1.67e-07;4!UBERON:0010133;1.67e-07;4!UBERON:0000007;2.60e-07;2!UBERON:0001873;3.84e-07;2!UBERON:0001894;4.12e-07;7!UBERON:0007023;4.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.54e-44,41;UBERON:0001890,2.54e-44,41;UBERON:0003080,2.54e-44,41;UBERON:0006240,2.54e-44,41;UBERON:0001869,3.73e-41,32;UBERON:0001893,1.89e-38,34;UBERON:0002791,3.20e-37,32;UBERON:0000073,1.15e-35,53;UBERON:0002616,1.15e-35,53;UBERON:0001950,3.48e-35,20;UBERON:0001017,4.41e-35,81;UBERON:0003528,9.27e-35,34;UBERON:0002020,9.27e-35,34;UBERON:0001049,2.17e-33,56;UBERON:0005068,2.17e-33,56;UBERON:0006241,2.17e-33,56;UBERON:0007135,2.17e-33,56;UBERON:0003056,2.78e-32,61;UBERON:0002619,9.45e-32,22;UBERON:0001016,9.53e-31,89;UBERON:0000955,3.71e-30,68;UBERON:0006238,3.71e-30,68;UBERON:0000956,1.36e-27,25;UBERON:0000203,1.36e-27,25;UBERON:0003075,4.62e-24,82;UBERON:0007284,4.62e-24,82;UBERON:0002346,1.35e-22,86;UBERON:0000200,2.79e-19,6;UBERON:0010371,2.09e-17,104;UBERON:0007023,9.29e-17,114;UBERON:0004121,5.17e-15,171;UBERON:0000924,5.17e-15,171;UBERON:0006601,5.17e-15,171;UBERON:0010314,2.04e-14,132;UBERON:0000369,1.82e-13,4;UBERON:0002435,1.82e-13,4;UBERON:0000204,1.82e-13,4;UBERON:0010082,1.82e-13,4;UBERON:0002420,2.52e-12,9;UBERON:0007245,2.52e-12,9;UBERON:0010009,2.52e-12,9;UBERON:0010011,2.52e-12,9;UBERON:0000454,2.52e-12,9;UBERON:0011216,7.80e-12,223;UBERON:0001871,1.83e-11,6;UBERON:0009663,3.50e-11,7;UBERON:0000025,9.93e-11,192;UBERON:0001870,1.04e-10,3;UBERON:0005383,1.68e-10,3;UBERON:0005382,1.68e-10,3;UBERON:0002021,3.57e-10,5;UBERON:0000125,1.30e-08,9;UBERON:0002308,1.30e-08,9;UBERON:0002702,6.06e-08,2;UBERON:0002771,1.09e-07,2;UBERON:0004111,1.34e-07,240;UBERON:0003296,1.66e-07,4;UBERON:0010133,1.66e-07,4;UBERON:0001873,2.27e-07,2;UBERON:0010122,2.27e-07,2;UBERON:0001894,3.04e-07,7;UBERON:0006222,3.04e-07,7;UBERON:0000007,3.31e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0,0.328875809207352,0,0.579606171470105,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.661743720148475,1.10864698731282,0.614843499851882,0.327447688744282,0.364295288292542,0,2.92092654289215,2.26368658489047,4.91944453919801,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0,1.58891016975863,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0.45071417671979,0.226864366320042,0.717558542755448,0,0.635795703478686,0.900273288253207,0.515262646192195,0.515281080091258,0.37223371266318,0.675105328965065,0,1.7670364197088,0.368199594569197,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.441175890929576,0.871517776369625,0.237270619111097,0,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.514703430895577,0.219500570817251,0,0,0.185176890317059,0,1.03993478527958,0,0.34779121492523,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,0,3.27605971194933,1.0404181360211,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,2.95597942737566,0.528290604079356,0.207328115540772,0,0.12624243342638,0.380987365753014,0.381988425558278,0,1.71072446022705,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0,0.387815147273333,0,0,0,0,0,1.41849132023278,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0.336255431980582,0,0.215627574859517,0,2.28685161800217,2.60279707715243,2.31986643833309,0.502548796003046,3.18969375826582,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.468565659970853,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0.686286847621712,0,0,0,0,1.66435439510497,0.604780586659361,0,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0.532685175939381,0.246381468041427,0,0.116210378459959,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.366277859273374,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0.623224249527161,0,0,1.02090169995667,0.4046311234222,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,0,0.606547444719948,0,0,0,0.974853958525138,2.11300293513511,0.409499734223957,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.47748896947538,0.593929361665277,0.307160702099232,0.994147647766298,3.23539657744179,0,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.02044907978036,0,1.30213880542617,0.437299999980979,0,0,0.508507300585533,0.236387681767936,0,0,0.347249989866585,1.77148277162768,2.65312164975897,0,0,0.295547618953547,1.31631238292384,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0.392125068635479,0.335643173951685,0.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| ||
|short_description=p4@SGSM2 | |||
}} | }} |
Latest revision as of 03:00, 19 September 2015
Short description: | p4@SGSM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SGSM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_NM_001098509_5end |
EntrezGene: | SGSM2 |
HGNC: | 29026 |
UniProt: | B9A6J3O43147 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.96e-09 | 5 |
common dendritic progenitor | 2.96e-09 | 5 |