FFCP PHASE1:Hg19::chr17:63133526..63133562,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:63133526..63133562,+
|short_description=p1@RGS9
|description=CAGE_peak_1_at_RGS9_5end
|association_with_transcript=0bp_to_uc002jfd.2,uc002jfe.2,uc002jff.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8787 | |EntrezGene=8787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10004 | |HGNC=10004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002jfd.2,uc002jfe.2,uc002jff.2,uc010dem.2_5end | |||
|cluster_id=chr17:63133526..63133562,+ | |||
|coexpression_cluster_id=C3665 | |||
|description=CAGE_peak_1_at_RGS9_5end | |||
|id=chr17:63133526..63133562,+ | |||
|ontology_enrichment_celltype=CL:0000625!6.37e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.06e-11;11!CL:0000791;3.97e-07;18!CL:0000789;3.97e-07;18!CL:0002419;3.97e-07;18!CL:0000084;5.32e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.19e-11,11;CL:0000838,3.54e-08,52;CL:0000542,7.02e-08,53;CL:0000051,7.02e-08,53;CL:0000791,2.83e-07,18;CL:0000789,2.83e-07,18;CL:0002420,2.83e-07,18;CL:0002419,2.83e-07,18;CL:0000790,2.83e-07,18;CL:0000084,3.59e-07,25;CL:0000827,3.59e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.97e-07;18!UBERON:0006601;4.99e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-41!115;UBERON:0001049!1.99e-25!57;UBERON:0005068!1.99e-25!57;UBERON:0006241!1.99e-25!57;UBERON:0007135!1.99e-25!57;UBERON:0001017!3.99e-25!82;UBERON:0005743!9.60e-24!86;UBERON:0000073!2.82e-22!94;UBERON:0001016!2.82e-22!94;UBERON:0002616!1.54e-21!59;UBERON:0000955!3.49e-21!69;UBERON:0006238!3.49e-21!69;UBERON:0002780!2.22e-19!41;UBERON:0001890!2.22e-19!41;UBERON:0006240!2.22e-19!41;UBERON:0003080!1.92e-18!42;UBERON:0003075!5.60e-17!86;UBERON:0007284!5.60e-17!86;UBERON:0002346!1.58e-15!90;UBERON:0001893!1.15e-14!34;UBERON:0002020!2.21e-14!34;UBERON:0003528!2.21e-14!34;UBERON:0002791!2.95e-14!33;UBERON:0000153!4.07e-14!129;UBERON:0007811!4.07e-14!129;UBERON:0001869!9.50e-14!32;UBERON:0000033!1.29e-12!123;UBERON:0003056!1.87e-12!61;UBERON:0002619!3.38e-11!22;UBERON:0001950!5.43e-10!20;UBERON:0004121!7.88e-10!169;UBERON:0000956!2.33e-09!25;UBERON:0000203!2.33e-09!25;UBERON:0000924!3.33e-09!173;UBERON:0006601!3.33e-09!173;UBERON:0003076!3.55e-08!15;UBERON:0003057!3.55e-08!15;UBERON:0002420!2.91e-07!9;UBERON:0007245!2.91e-07!9;UBERON:0010009!2.91e-07!9;UBERON:0010011!2.91e-07!9;UBERON:0000454!2.91e-07!9;UBERON:0002308!7.90e-07!9;UBERON:0000125!7.90e-07!9;UBERON:0004732!9.10e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.36e-20;41!UBERON:0001890;5.36e-20;41!UBERON:0000073;1.78e-18;53!UBERON:0002616;1.78e-18;53!UBERON:0001893;8.94e-16;34!UBERON:0002791;9.91e-16;32!UBERON:0001869;1.57e-15;32!UBERON:0003528;1.80e-15;34!UBERON:0002020;1.80e-15;34!UBERON:0002619;4.04e-13;22!UBERON:0007023;6.66e-13;114!UBERON:0000955;1.26e-12;68!UBERON:0001017;4.60e-12;75!UBERON:0001950;2.36e-11;20!UBERON:0000956;6.66e-11;25!UBERON:0000203;6.66e-11;25!UBERON:0002420;1.18e-10;9!UBERON:0007245;1.18e-10;9!UBERON:0010009;1.18e-10;9!UBERON:0010011;1.18e-10;9!UBERON:0000454;1.18e-10;9!UBERON:0001016;1.53e-10;83!UBERON:0000125;5.38e-10;9!UBERON:0002308;5.38e-10;9!UBERON:0001894;2.41e-09;7!UBERON:0009663;6.71e-09;7!UBERON:0004732;1.45e-07;13!UBERON:0004733;7.18e-07;12!UBERON:0002028;7.18e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.72e-45,114;UBERON:0001049,4.84e-35,56;UBERON:0005068,4.84e-35,56;UBERON:0006241,4.84e-35,56;UBERON:0007135,4.84e-35,56;UBERON:0000073,6.26e-32,53;UBERON:0002616,6.26e-32,53;UBERON:0001017,1.28e-27,81;UBERON:0000955,2.55e-27,68;UBERON:0006238,2.55e-27,68;UBERON:0002780,3.88e-26,41;UBERON:0001890,3.88e-26,41;UBERON:0003080,3.88e-26,41;UBERON:0006240,3.88e-26,41;UBERON:0001016,4.01e-25,89;UBERON:0003075,5.31e-22,82;UBERON:0007284,5.31e-22,82;UBERON:0002346,3.49e-20,86;UBERON:0001893,6.53e-19,34;UBERON:0003528,1.69e-18,34;UBERON:0002020,1.69e-18,34;UBERON:0001869,1.73e-17,32;UBERON:0002791,3.05e-17,32;UBERON:0003056,5.73e-17,61;UBERON:0010371,7.08e-14,104;UBERON:0011216,3.57e-13,223;UBERON:0002619,3.82e-13,22;UBERON:0001950,2.44e-11,20;UBERON:0010314,3.27e-11,132;UBERON:0000956,6.34e-11,25;UBERON:0000203,6.34e-11,25;UBERON:0002420,1.31e-10,9;UBERON:0007245,1.31e-10,9;UBERON:0010009,1.31e-10,9;UBERON:0010011,1.31e-10,9;UBERON:0000454,1.31e-10,9;UBERON:0000125,6.33e-10,9;UBERON:0002308,6.33e-10,9;UBERON:0003076,6.40e-10,15;UBERON:0003057,6.40e-10,15;UBERON:0001894,2.41e-09,7;UBERON:0006222,2.41e-09,7;UBERON:0009663,9.08e-09,7;UBERON:0004121,1.00e-08,171;UBERON:0000924,1.00e-08,171;UBERON:0006601,1.00e-08,171;UBERON:0004732,8.20e-08,13;UBERON:0004733,4.87e-07,12;UBERON:0002028,4.87e-07,12;UBERON:0007277,4.87e-07,12;UBERON:0000025,5.50e-07,192 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.408001382488506,1.88072832886853,0,0,0.251085279189606,0,0.164201178899891,0,1.57345710739562,5.75744097145819,0.928896739896456,0,0,0,2.86628642147116,2.98555388223585,0,2.21598163412751,1.60435557976113,2.38711957787437,0.447830948479849,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0.393010762749165,0.822405995998037,0,0,0,0,5.34770193048833,0,0.221533894583621,0,6.14838334683241,5.85267064019452,0.986627427622057,3.03985019564433,0.579606171470105,0,0,0,2.37949619664889,0.766440987203842,0.68725489096526,1.01207876807801,2.86708872891687,3.25541726928209,2.85135613334512,4.06552821509986,4.73550461271348,2.49861453104692,2.60454977248419,4.92676798152628,4.83856183739358,7.2208852861547,3.33096128930438,0,0,0.383587685530591,0,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,2.68507104770311,0,0,0.324547393654683,0,0,0.476981248610684,0.571994910780128,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,1.00416183829401,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0.516628905878827,0,0,0,0,1.5150250255866,0.125118519871964,0.554128230968366,0.438977620880838,0,0,0.340296549480063,0,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0.484938170456436,0,0.10075209822764,0,0,0,0,0.365921118388786,0.132529768321485,0,0.829288440122964,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,1.7658523976586,0,0,0,0,0,0,0,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,1.47798971368783,1.84901711427775,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0.129271715757778,3.57656445851882,0,1.32969058292435,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0.718874566474748,2.29723871668228,0,0,0,0,6.72510863961164,9.65450724989443,12.2907717669925,10.5241289749394,0.254094624222463,1.30139853857622,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0,2.27407504055985,0,0,0,0.695068915744663,0.195801157462741,1.02943027143257,1.44737618286021,0.862856803274467,3.30855429190677,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,1.00119938235739,0,0,1.05551628892876,1.13733384070897,0,0.215915916102139,0,1.62567862526312,1.00337954770971,0,0,0,7.23557592931584,5.22870902049801,0,0,0,0.824328093181778,0.0915694648183434,0.330037999682352,0,0,3.21367859688319,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0.165284915360978,0,0,0.2023155617111,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0.689170200620878,2.53723804616085,2.29391162142713,5.12682468456746,4.04994018278241,2.87953591160336,1.29694662238543,1.08006287447623,1.58625035258854,0.427296284509893,0,0.735120647943095,0.371606350251437,2.30830740762312,0,0.956557636372934,0,0.5745161103971,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,1.08182271390393,0,0,0,0.879049075631364,0,7.68959351514601,0.852408440419239,0,0,0,5.96488588659779,2.67271891179974,2.33748280548102,0,0.211125408127993,2.19172787076177,4.14425873296722,3.27512572210559,1.1249555075237,3.44637455290994,2.48831670129446,0.0898683511473268,0,0,3.05794557474494,2.3948309234694,0,5.81599647657131,2.78304294485554,3.99227596002388,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,16.8290863304629,12.7832224942932,1.52581736317083,2.32216445855572,3.54657142744257,2.85201016300164,0,0,1.15425387755696,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0.158936578980379,1.68798451622422,0.326465616318295,0,0.216388639742091,5.97157158647103,1.94606641907346,2.4441205797345,0,0,0,7.61632802681651,0.802577647298789,14.2901311892457,3.83155057352899,0.19566461893209,0.242780379534093,0.789168805698781,2.41981432097328,1.22429104652196,0.505492637027904,0,0.311064574191741,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.609414446062818,3.31980669659857,5.50355303909173,0,0,0,2.5217144286989,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| ||
|short_description=p1@RGS9 | |||
}} | }} |
Latest revision as of 20:33, 16 September 2015
Short description: | p1@RGS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS9_5end |
Coexpression cluster: | C3665_pineal_eye_retina_caudate_migratory_globus_putamen |
Association with transcript: | 0bp_to_uc002jfd.2, uc002jfe.2, uc002jff.2, uc010dem.2_5end |
EntrezGene: | RGS9 |
HGNC: | 10004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.19e-11 | 11 |
lymphoid lineage restricted progenitor cell | 3.54e-08 | 52 |
lymphocyte | 7.02e-08 | 53 |
common lymphoid progenitor | 7.02e-08 | 53 |
mature alpha-beta T cell | 2.83e-07 | 18 |
alpha-beta T cell | 2.83e-07 | 18 |
immature T cell | 2.83e-07 | 18 |
mature T cell | 2.83e-07 | 18 |
immature alpha-beta T cell | 2.83e-07 | 18 |
T cell | 3.59e-07 | 25 |
pro-T cell | 3.59e-07 | 25 |