FFCP PHASE1:Hg19::chr11:31832610..31832639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=-17bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=-17bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832610..31832639,- | |||
|coexpression_cluster_id=C798 | |coexpression_cluster_id=C798 | ||
|description=CAGE_peak_5_at_PAX6_5end | |description=CAGE_peak_5_at_PAX6_5end | ||
|id=chr11:31832610..31832639,- | |id=chr11:31832610..31832639,- | ||
|ontology_enrichment_celltype=CL:0002319!4.41e-08!25;CL:0000128!1.03e-07!7;CL:0000126!1.03e-07!7;CL:0000127!1.03e-07!7;CL:0002453!1.03e-07!7 | |ontology_enrichment_celltype=CL:0002319!4.41e-08!25;CL:0000128!1.03e-07!7;CL:0000126!1.03e-07!7;CL:0000127!1.03e-07!7;CL:0002453!1.03e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.32e-11;7!CL:0000126;1.32e-11;7!CL:0000127;1.32e-11;7!CL:0002319;9.89e-10;25!CL:0000306;2.28e-08;4!CL:0002222;2.28e-08;4!CL:0002224;2.28e-08;4!CL:0000064;8.92e-07;3!CL:0000067;8.92e-07;3!CL:0005012;8.92e-07;3!CL:0002304;8.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.06e-12,7;CL:0000126,8.06e-12,7;CL:0000127,8.06e-12,7;CL:0002453,8.06e-12,7;CL:0002319,7.90e-10,25;CL:0000306,2.31e-08,4;CL:0002222,2.31e-08,4;CL:0002224,2.31e-08,4;CL:0000064,8.96e-07,3;CL:0000067,8.96e-07,3;CL:0005012,8.96e-07,3;CL:0002304,8.96e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.68e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.34e-16!143;DOID:14566!6.81e-13!239;DOID:162!8.40e-13!235;DOID:305!1.04e-12!106 | |ontology_enrichment_disease=DOID:0050687!2.34e-16!143;DOID:14566!6.81e-13!239;DOID:162!8.40e-13!235;DOID:305!1.04e-12!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.92e-10,143;DOID:162,1.43e-07,235;DOID:305,1.96e-07,106;DOID:14566,3.78e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002346!4.22e-40!90;UBERON:0003075!3.91e-39!86;UBERON:0007284!3.91e-39!86;UBERON:0005743!6.75e-38!86;UBERON:0000073!8.77e-37!94;UBERON:0001016!8.77e-37!94;UBERON:0001049!5.47e-35!57;UBERON:0005068!5.47e-35!57;UBERON:0006241!5.47e-35!57;UBERON:0007135!5.47e-35!57;UBERON:0001017!1.98e-34!82;UBERON:0002616!7.32e-31!59;UBERON:0003056!9.52e-31!61;UBERON:0000955!6.52e-29!69;UBERON:0006238!6.52e-29!69;UBERON:0000033!1.09e-25!123;UBERON:0000924!1.34e-24!173;UBERON:0006601!1.34e-24!173;UBERON:0004121!1.51e-23!169;UBERON:0002780!2.42e-23!41;UBERON:0001890!2.42e-23!41;UBERON:0006240!2.42e-23!41;UBERON:0000153!2.82e-23!129;UBERON:0007811!2.82e-23!129;UBERON:0003080!1.82e-22!42;UBERON:0002020!1.73e-18!34;UBERON:0003528!1.73e-18!34;UBERON:0001893!1.80e-18!34;UBERON:0002791!7.15e-18!33;UBERON:0001869!2.29e-17!32;UBERON:0003076!5.53e-14!15;UBERON:0003057!5.53e-14!15;UBERON:0000956!8.89e-14!25;UBERON:0000203!8.89e-14!25;UBERON:0007625!3.55e-12!11;UBERON:0004733!1.18e-11!12;UBERON:0002028!1.18e-11!12;UBERON:0007277!1.18e-11!12;UBERON:0002619!3.32e-11!22;UBERON:0004732!1.98e-10!13;UBERON:0000970!3.61e-10!20;UBERON:0001950!4.33e-10!20;UBERON:0002104!2.01e-09!21;UBERON:0000019!2.67e-09!19;UBERON:0000047!2.67e-09!19;UBERON:0004088!2.67e-09!19;UBERON:0003072!2.67e-09!19;UBERON:0003071!2.67e-09!19;UBERON:0004128!2.67e-09!19;UBERON:0002680!2.75e-09!9;UBERON:0001895!2.75e-09!9;UBERON:0010092!2.75e-09!9;UBERON:0000020!3.84e-08!23;UBERON:0001456!6.05e-08!21;UBERON:0001032!1.38e-07!24;UBERON:0004456!1.38e-07!24;UBERON:0007023!1.44e-07!115;UBERON:0002037!2.43e-07!6;UBERON:0006215!2.43e-07!6;UBERON:0000064!4.57e-07!219;UBERON:0001801!7.28e-07!14 | |ontology_enrichment_uberon=UBERON:0002346!4.22e-40!90;UBERON:0003075!3.91e-39!86;UBERON:0007284!3.91e-39!86;UBERON:0005743!6.75e-38!86;UBERON:0000073!8.77e-37!94;UBERON:0001016!8.77e-37!94;UBERON:0001049!5.47e-35!57;UBERON:0005068!5.47e-35!57;UBERON:0006241!5.47e-35!57;UBERON:0007135!5.47e-35!57;UBERON:0001017!1.98e-34!82;UBERON:0002616!7.32e-31!59;UBERON:0003056!9.52e-31!61;UBERON:0000955!6.52e-29!69;UBERON:0006238!6.52e-29!69;UBERON:0000033!1.09e-25!123;UBERON:0000924!1.34e-24!173;UBERON:0006601!1.34e-24!173;UBERON:0004121!1.51e-23!169;UBERON:0002780!2.42e-23!41;UBERON:0001890!2.42e-23!41;UBERON:0006240!2.42e-23!41;UBERON:0000153!2.82e-23!129;UBERON:0007811!2.82e-23!129;UBERON:0003080!1.82e-22!42;UBERON:0002020!1.73e-18!34;UBERON:0003528!1.73e-18!34;UBERON:0001893!1.80e-18!34;UBERON:0002791!7.15e-18!33;UBERON:0001869!2.29e-17!32;UBERON:0003076!5.53e-14!15;UBERON:0003057!5.53e-14!15;UBERON:0000956!8.89e-14!25;UBERON:0000203!8.89e-14!25;UBERON:0007625!3.55e-12!11;UBERON:0004733!1.18e-11!12;UBERON:0002028!1.18e-11!12;UBERON:0007277!1.18e-11!12;UBERON:0002619!3.32e-11!22;UBERON:0004732!1.98e-10!13;UBERON:0000970!3.61e-10!20;UBERON:0001950!4.33e-10!20;UBERON:0002104!2.01e-09!21;UBERON:0000019!2.67e-09!19;UBERON:0000047!2.67e-09!19;UBERON:0004088!2.67e-09!19;UBERON:0003072!2.67e-09!19;UBERON:0003071!2.67e-09!19;UBERON:0004128!2.67e-09!19;UBERON:0002680!2.75e-09!9;UBERON:0001895!2.75e-09!9;UBERON:0010092!2.75e-09!9;UBERON:0000020!3.84e-08!23;UBERON:0001456!6.05e-08!21;UBERON:0001032!1.38e-07!24;UBERON:0004456!1.38e-07!24;UBERON:0007023!1.44e-07!115;UBERON:0002037!2.43e-07!6;UBERON:0006215!2.43e-07!6;UBERON:0000064!4.57e-07!219;UBERON:0001801!7.28e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.74e-19;11!UBERON:0004733;1.29e-15;12!UBERON:0002028;1.29e-15;12!UBERON:0000970;1.74e-15;20!UBERON:0002104;1.50e-14;21!UBERON:0004732;3.42e-14;13!UBERON:0000019;4.72e-14;19!UBERON:0000047;4.72e-14;19!UBERON:0004088;4.72e-14;19!UBERON:0010230;4.72e-14;19!UBERON:0000020;6.30e-13;23!UBERON:0001456;2.34e-12;21!UBERON:0001032;3.21e-12;24!UBERON:0004456;3.21e-12;24!UBERON:0002680;9.38e-12;9!UBERON:0001895;9.38e-12;9!UBERON:0000073;1.60e-11;53!UBERON:0002616;1.60e-11;53!UBERON:0002037;4.66e-11;6!UBERON:0001801;8.07e-10;14!UBERON:0001017;6.76e-09;75!UBERON:0010077;2.28e-08;4!UBERON:0005389;2.28e-08;4!UBERON:0000484;2.28e-08;4!UBERON:0000965;2.28e-08;4!UBERON:0001803;2.28e-08;4!UBERON:0000955;2.50e-08;68!UBERON:0000488;2.52e-08;4!UBERON:0001016;9.09e-08;83!UBERON:0003296;4.88e-07;4!UBERON:0010133;4.88e-07;4!UBERON:0010371;6.03e-07;31!UBERON:0001778;8.92e-07;3!UBERON:0001775;8.92e-07;3 | |||
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|short_description=p5@PAX6 | |short_description=p5@PAX6 | ||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p5@PAX6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -17bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.06e-12 | 7 |
macroglial cell | 8.06e-12 | 7 |
astrocyte | 8.06e-12 | 7 |
oligodendrocyte precursor cell | 8.06e-12 | 7 |
neural cell | 7.90e-10 | 25 |
crystallin accumulating cell | 2.31e-08 | 4 |
vertebrate lens cell | 2.31e-08 | 4 |
lens epithelial cell | 2.31e-08 | 4 |
ciliated cell | 8.96e-07 | 3 |
ciliated epithelial cell | 8.96e-07 | 3 |
multi-ciliated epithelial cell | 8.96e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.92e-10 | 143 |
cancer | 1.43e-07 | 235 |
carcinoma | 1.96e-07 | 106 |
disease of cellular proliferation | 3.78e-07 | 239 |