FFCP PHASE1:Hg19::chr19:13617378..13617399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=773 | |EntrezGene=773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1388 | |HGNC=1388 | ||
|TSSclassifier=strong | |||
|UniProt=O00555,Q9NS88,B5TYJ1 | |UniProt=O00555,Q9NS88,B5TYJ1 | ||
|association_with_transcript=-104bp_to_ENST00000325084,ENST00000360228,NM_000068,NM_001127221,NM_001127222,NM_001174080,NM_023035,uc002mwy.3,uc010dze.2_5end | |association_with_transcript=-104bp_to_ENST00000325084,ENST00000360228,NM_000068,NM_001127221,NM_001127222,NM_001174080,NM_023035,uc002mwy.3,uc010dze.2_5end | ||
|cluster_id=chr19:13617378..13617399,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_8_at_CACNA1A_5end | |description=CAGE_peak_8_at_CACNA1A_5end | ||
|id=chr19:13617378..13617399,- | |id=chr19:13617378..13617399,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.62e-39;3!UBERON:0006601;5.30e-07;82 | |||
|ontology_enrichment_disease=DOID:3307!2.08e-07!2 | |ontology_enrichment_disease=DOID:3307!2.08e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3307;1.12e-25;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.16e-26,2 | |||
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| ||
|short_description=p8@CACNA1A | |short_description=p8@CACNA1A | ||
}} | }} |
Latest revision as of 01:13, 16 September 2015
Short description: | p8@CACNA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CACNA1A_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -104bp_to_ENST00000325084, ENST00000360228, NM_000068, NM_001127221, NM_001127222, NM_001174080, NM_023035, uc002mwy.3, uc010dze.2_5end |
EntrezGene: | CACNA1A |
HGNC: | 1388 |
UniProt: | O00555Q9NS88B5TYJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
teratoma | 3.16e-26 | 2 |