FFCP PHASE1:Hg19::chr1:109940510..109940549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6272 | |EntrezGene=6272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11186 | |HGNC=11186 | ||
|TSSclassifier=strong | |||
|UniProt=Q99523 | |UniProt=Q99523 | ||
|association_with_transcript=13bp_to_NM_002959,uc001dxm.1_5end | |association_with_transcript=13bp_to_NM_002959,uc001dxm.1_5end | ||
|cluster_id=chr1:109940510..109940549,- | |||
|coexpression_cluster_id=C2511 | |coexpression_cluster_id=C2511 | ||
|description=CAGE_peak_1_at_SORT1_5end | |description=CAGE_peak_1_at_SORT1_5end | ||
|id=chr1:109940510..109940549,- | |id=chr1:109940510..109940549,- | ||
|ontology_enrichment_celltype=CL:0000325!6.80e-07!39 | |ontology_enrichment_celltype=CL:0000325!6.80e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.56e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.33e-32!86;UBERON:0007023!2.39e-31!115;UBERON:0000073!1.89e-30!94;UBERON:0001016!1.89e-30!94;UBERON:0001017!2.55e-30!82;UBERON:0001049!1.98e-27!57;UBERON:0005068!1.98e-27!57;UBERON:0006241!1.98e-27!57;UBERON:0007135!1.98e-27!57;UBERON:0000955!2.94e-26!69;UBERON:0006238!2.94e-26!69;UBERON:0002616!5.34e-26!59;UBERON:0003075!3.35e-24!86;UBERON:0007284!3.35e-24!86;UBERON:0004121!2.67e-23!169;UBERON:0000924!1.17e-21!173;UBERON:0006601!1.17e-21!173;UBERON:0002346!1.21e-21!90;UBERON:0003080!2.37e-21!42;UBERON:0002780!7.42e-21!41;UBERON:0001890!7.42e-21!41;UBERON:0006240!7.42e-21!41;UBERON:0001893!1.18e-19!34;UBERON:0000062!1.27e-19!511;UBERON:0002020!1.50e-19!34;UBERON:0003528!1.50e-19!34;UBERON:0000033!3.87e-19!123;UBERON:0002791!5.17e-19!33;UBERON:0003056!8.83e-19!61;UBERON:0001869!2.77e-18!32;UBERON:0000153!2.10e-17!129;UBERON:0007811!2.10e-17!129;UBERON:0000468!9.43e-17!659;UBERON:0000922!1.55e-14!612;UBERON:0000956!2.41e-14!25;UBERON:0000203!2.41e-14!25;UBERON:0002050!9.89e-14!605;UBERON:0005423!9.89e-14!605;UBERON:0000923!1.28e-13!604;UBERON:0005291!1.28e-13!604;UBERON:0006598!1.28e-13!604;UBERON:0002532!1.28e-13!604;UBERON:0002619!6.56e-13!22;UBERON:0000467!9.02e-13!625;UBERON:0000480!2.02e-12!626;UBERON:0001950!1.13e-11!20;UBERON:0000064!3.01e-11!219;UBERON:0000475!2.99e-09!365;UBERON:0000481!2.58e-07!347;UBERON:0003076!2.87e-07!15;UBERON:0003057!2.87e-07!15 | |ontology_enrichment_uberon=UBERON:0005743!4.33e-32!86;UBERON:0007023!2.39e-31!115;UBERON:0000073!1.89e-30!94;UBERON:0001016!1.89e-30!94;UBERON:0001017!2.55e-30!82;UBERON:0001049!1.98e-27!57;UBERON:0005068!1.98e-27!57;UBERON:0006241!1.98e-27!57;UBERON:0007135!1.98e-27!57;UBERON:0000955!2.94e-26!69;UBERON:0006238!2.94e-26!69;UBERON:0002616!5.34e-26!59;UBERON:0003075!3.35e-24!86;UBERON:0007284!3.35e-24!86;UBERON:0004121!2.67e-23!169;UBERON:0000924!1.17e-21!173;UBERON:0006601!1.17e-21!173;UBERON:0002346!1.21e-21!90;UBERON:0003080!2.37e-21!42;UBERON:0002780!7.42e-21!41;UBERON:0001890!7.42e-21!41;UBERON:0006240!7.42e-21!41;UBERON:0001893!1.18e-19!34;UBERON:0000062!1.27e-19!511;UBERON:0002020!1.50e-19!34;UBERON:0003528!1.50e-19!34;UBERON:0000033!3.87e-19!123;UBERON:0002791!5.17e-19!33;UBERON:0003056!8.83e-19!61;UBERON:0001869!2.77e-18!32;UBERON:0000153!2.10e-17!129;UBERON:0007811!2.10e-17!129;UBERON:0000468!9.43e-17!659;UBERON:0000922!1.55e-14!612;UBERON:0000956!2.41e-14!25;UBERON:0000203!2.41e-14!25;UBERON:0002050!9.89e-14!605;UBERON:0005423!9.89e-14!605;UBERON:0000923!1.28e-13!604;UBERON:0005291!1.28e-13!604;UBERON:0006598!1.28e-13!604;UBERON:0002532!1.28e-13!604;UBERON:0002619!6.56e-13!22;UBERON:0000467!9.02e-13!625;UBERON:0000480!2.02e-12!626;UBERON:0001950!1.13e-11!20;UBERON:0000064!3.01e-11!219;UBERON:0000475!2.99e-09!365;UBERON:0000481!2.58e-07!347;UBERON:0003076!2.87e-07!15;UBERON:0003057!2.87e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.53e-17;34!UBERON:0003528;7.46e-17;34!UBERON:0002020;7.46e-17;34!UBERON:0001869;1.07e-16;32!UBERON:0002791;1.08e-16;32!UBERON:0002780;3.56e-15;41!UBERON:0001890;3.56e-15;41!UBERON:0000073;2.09e-14;53!UBERON:0002616;2.09e-14;53!UBERON:0000956;2.36e-14;25!UBERON:0000203;2.36e-14;25!UBERON:0002619;6.43e-13;22!UBERON:0001950;1.11e-11;20!UBERON:0001017;1.71e-11;75!UBERON:0000955;2.89e-11;68!UBERON:0001016;9.89e-10;83!UBERON:0007023;6.03e-09;114!UBERON:0011216;6.92e-07;132 | |||
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| ||
|short_description=p1@SORT1 | |short_description=p1@SORT1 | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p1@SORT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SORT1_5end |
Coexpression cluster: | C2511_optic_substantia_corpus_hippocampus_globus_thalamus_spinal |
Association with transcript: | 13bp_to_NM_002959, uc001dxm.1_5end |
EntrezGene: | SORT1 |
HGNC: | 11186 |
UniProt: | Q99523 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data