FFCP PHASE1:Hg19::chr2:51259641..51259642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQN4,Q9ULB1,A7E294,A4FVB9,Q49A31 | |UniProt=E7EQN4,Q9ULB1,A7E294,A4FVB9,Q49A31 | ||
|association_with_transcript=31bp_to_ENST00000405581,ENST00000406316,NM_001135659,NM_004801,uc002rxd.1,uc002rxe.3,uc010fbq.2_5end | |association_with_transcript=31bp_to_ENST00000405581,ENST00000406316,NM_001135659,NM_004801,uc002rxd.1,uc002rxe.3,uc010fbq.2_5end | ||
|cluster_id=chr2:51259641..51259642,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_21_at_NRXN1_5end | |description=CAGE_peak_21_at_NRXN1_5end | ||
|id=chr2:51259641..51259642,- | |id=chr2:51259641..51259642,- | ||
|ontology_enrichment_celltype=CL:0000242!5.42e-07!2 | |ontology_enrichment_celltype=CL:0000242!5.42e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.01e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.70e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.72e-79!57;UBERON:0005068!2.72e-79!57;UBERON:0006241!2.72e-79!57;UBERON:0007135!2.72e-79!57;UBERON:0001017!3.23e-72!82;UBERON:0005743!2.31e-71!86;UBERON:0000073!2.23e-69!94;UBERON:0001016!2.23e-69!94;UBERON:0002616!8.07e-69!59;UBERON:0002780!4.01e-63!41;UBERON:0001890!4.01e-63!41;UBERON:0006240!4.01e-63!41;UBERON:0000955!6.40e-63!69;UBERON:0006238!6.40e-63!69;UBERON:0003080!1.89e-61!42;UBERON:0003075!6.17e-60!86;UBERON:0007284!6.17e-60!86;UBERON:0002020!2.68e-58!34;UBERON:0003528!2.68e-58!34;UBERON:0001893!3.39e-58!34;UBERON:0002346!8.77e-57!90;UBERON:0002791!1.94e-55!33;UBERON:0001869!1.71e-53!32;UBERON:0002619!5.82e-51!22;UBERON:0003056!2.24e-45!61;UBERON:0001950!3.21e-45!20;UBERON:0000956!2.06e-44!25;UBERON:0000203!2.06e-44!25;UBERON:0004121!5.26e-37!169;UBERON:0007023!4.93e-36!115;UBERON:0000924!7.20e-36!173;UBERON:0006601!7.20e-36!173;UBERON:0000033!1.12e-34!123;UBERON:0000153!1.43e-32!129;UBERON:0007811!1.43e-32!129;UBERON:0000025!1.86e-20!194;UBERON:0001871!6.62e-19!7;UBERON:0003076!4.09e-18!15;UBERON:0003057!4.09e-18!15;UBERON:0002298!3.67e-17!8;UBERON:0001872!2.76e-16!5;UBERON:0000349!1.57e-15!5;UBERON:0004733!3.72e-15!12;UBERON:0002028!3.72e-15!12;UBERON:0007277!3.72e-15!12;UBERON:0002308!5.04e-15!9;UBERON:0000125!5.04e-15!9;UBERON:0002420!5.39e-15!9;UBERON:0007245!5.39e-15!9;UBERON:0010009!5.39e-15!9;UBERON:0010011!5.39e-15!9;UBERON:0000454!5.39e-15!9;UBERON:0004111!2.66e-14!241;UBERON:0000483!5.95e-14!309;UBERON:0004732!7.07e-14!13;UBERON:0000119!1.06e-13!312;UBERON:0000200!1.63e-13!6;UBERON:0000064!6.04e-13!219;UBERON:0000477!3.81e-11!286;UBERON:0002771!1.41e-10!3;UBERON:0002021!1.62e-10!5;UBERON:0009663!4.14e-10!7;UBERON:0000988!5.81e-10!3;UBERON:0000475!2.40e-09!365;UBERON:0006331!2.50e-09!3;UBERON:0001896!3.06e-09!3;UBERON:0005290!3.06e-09!3;UBERON:0010096!3.06e-09!3;UBERON:0002680!1.10e-08!9;UBERON:0001895!1.10e-08!9;UBERON:0010092!1.10e-08!9;UBERON:0001954!1.91e-07!2;UBERON:0003022!1.91e-07!2;UBERON:0002421!1.91e-07!2;UBERON:0002600!1.91e-07!2;UBERON:0000369!2.72e-07!4;UBERON:0002435!2.72e-07!4;UBERON:0000204!2.72e-07!4;UBERON:0010082!2.72e-07!4;UBERON:0002148!4.95e-07!2;UBERON:0009662!4.95e-07!2;UBERON:0001897!5.10e-07!2;UBERON:0001876!5.42e-07!2;UBERON:0001894!5.75e-07!7;UBERON:0006222!5.75e-07!7;UBERON:0000481!9.45e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!2.72e-79!57;UBERON:0005068!2.72e-79!57;UBERON:0006241!2.72e-79!57;UBERON:0007135!2.72e-79!57;UBERON:0001017!3.23e-72!82;UBERON:0005743!2.31e-71!86;UBERON:0000073!2.23e-69!94;UBERON:0001016!2.23e-69!94;UBERON:0002616!8.07e-69!59;UBERON:0002780!4.01e-63!41;UBERON:0001890!4.01e-63!41;UBERON:0006240!4.01e-63!41;UBERON:0000955!6.40e-63!69;UBERON:0006238!6.40e-63!69;UBERON:0003080!1.89e-61!42;UBERON:0003075!6.17e-60!86;UBERON:0007284!6.17e-60!86;UBERON:0002020!2.68e-58!34;UBERON:0003528!2.68e-58!34;UBERON:0001893!3.39e-58!34;UBERON:0002346!8.77e-57!90;UBERON:0002791!1.94e-55!33;UBERON:0001869!1.71e-53!32;UBERON:0002619!5.82e-51!22;UBERON:0003056!2.24e-45!61;UBERON:0001950!3.21e-45!20;UBERON:0000956!2.06e-44!25;UBERON:0000203!2.06e-44!25;UBERON:0004121!5.26e-37!169;UBERON:0007023!4.93e-36!115;UBERON:0000924!7.20e-36!173;UBERON:0006601!7.20e-36!173;UBERON:0000033!1.12e-34!123;UBERON:0000153!1.43e-32!129;UBERON:0007811!1.43e-32!129;UBERON:0000025!1.86e-20!194;UBERON:0001871!6.62e-19!7;UBERON:0003076!4.09e-18!15;UBERON:0003057!4.09e-18!15;UBERON:0002298!3.67e-17!8;UBERON:0001872!2.76e-16!5;UBERON:0000349!1.57e-15!5;UBERON:0004733!3.72e-15!12;UBERON:0002028!3.72e-15!12;UBERON:0007277!3.72e-15!12;UBERON:0002308!5.04e-15!9;UBERON:0000125!5.04e-15!9;UBERON:0002420!5.39e-15!9;UBERON:0007245!5.39e-15!9;UBERON:0010009!5.39e-15!9;UBERON:0010011!5.39e-15!9;UBERON:0000454!5.39e-15!9;UBERON:0004111!2.66e-14!241;UBERON:0000483!5.95e-14!309;UBERON:0004732!7.07e-14!13;UBERON:0000119!1.06e-13!312;UBERON:0000200!1.63e-13!6;UBERON:0000064!6.04e-13!219;UBERON:0000477!3.81e-11!286;UBERON:0002771!1.41e-10!3;UBERON:0002021!1.62e-10!5;UBERON:0009663!4.14e-10!7;UBERON:0000988!5.81e-10!3;UBERON:0000475!2.40e-09!365;UBERON:0006331!2.50e-09!3;UBERON:0001896!3.06e-09!3;UBERON:0005290!3.06e-09!3;UBERON:0010096!3.06e-09!3;UBERON:0002680!1.10e-08!9;UBERON:0001895!1.10e-08!9;UBERON:0010092!1.10e-08!9;UBERON:0001954!1.91e-07!2;UBERON:0003022!1.91e-07!2;UBERON:0002421!1.91e-07!2;UBERON:0002600!1.91e-07!2;UBERON:0000369!2.72e-07!4;UBERON:0002435!2.72e-07!4;UBERON:0000204!2.72e-07!4;UBERON:0010082!2.72e-07!4;UBERON:0002148!4.95e-07!2;UBERON:0009662!4.95e-07!2;UBERON:0001897!5.10e-07!2;UBERON:0001876!5.42e-07!2;UBERON:0001894!5.75e-07!7;UBERON:0006222!5.75e-07!7;UBERON:0000481!9.45e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.21e-79;22!UBERON:0000956;6.75e-70;25!UBERON:0000203;6.75e-70;25!UBERON:0001950;1.27e-66;20!UBERON:0001869;1.56e-59;32!UBERON:0001893;3.28e-54;34!UBERON:0002791;1.15e-53;32!UBERON:0003528;1.55e-49;34!UBERON:0002020;1.55e-49;34!UBERON:0002780;2.12e-41;41!UBERON:0001890;2.12e-41;41!UBERON:0000073;2.54e-35;53!UBERON:0002616;2.54e-35;53!UBERON:0000200;1.60e-30;6!UBERON:0001872;1.81e-24;5!UBERON:0000955;1.75e-22;68!UBERON:0001017;1.82e-18;75!UBERON:0001016;4.04e-18;83!UBERON:0001871;4.50e-17;6!UBERON:0002771;9.82e-16;2!UBERON:0001954;9.82e-16;2!UBERON:0003022;9.82e-16;2!UBERON:0002421;9.82e-16;2!UBERON:0002600;9.82e-16;2!UBERON:0002021;3.64e-14;5!UBERON:0000349;7.25e-14;5!UBERON:0001870;8.44e-11;3!UBERON:0011216;5.82e-10;132!UBERON:0002581;1.01e-08;1!UBERON:0002902;1.01e-08;1!UBERON:0001882;1.01e-08;1!UBERON:0002022;1.01e-08;1!UBERON:0003112;1.01e-08;1!UBERON:0011158;1.01e-08;1!UBERON:0009899;1.01e-08;1!UBERON:0007190;1.01e-08;1!UBERON:0003128;1.01e-08;1!UBERON:0005403;1.01e-08;1!UBERON:0001703;1.01e-08;1!UBERON:0002241;1.01e-08;1!UBERON:0002680;4.49e-08;9!UBERON:0001895;4.49e-08;9!UBERON:0007023;4.65e-07;114 | |||
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|short_description=p21@NRXN1 | |short_description=p21@NRXN1 | ||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p21@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_NRXN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 31bp_to_ENST00000405581, ENST00000406316, NM_001135659, NM_004801, uc002rxd.1, uc002rxe.3, uc010fbq.2_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | E7EQN4Q9ULB1A7E294A4FVB9Q49A31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.70e-09 | 1 |