FFCP PHASE1:Hg19::chr19:49933222..49933235,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49933222..49933235,-
|short_description=p@chr19:49933222..49933235,-
|description=CAGE_peak_at_chr19:49933222..49933235,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49933222..49933235,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr19:49933222..49933235,- | |||
|id=chr19:49933222..49933235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.14e-15;3!UBERON:0006601;8.23e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.08e-66!22;UBERON:0001950!1.23e-59!20;UBERON:0000956!2.41e-58!25;UBERON:0000203!2.41e-58!25;UBERON:0002780!1.73e-57!41;UBERON:0001890!1.73e-57!41;UBERON:0006240!1.73e-57!41;UBERON:0003080!5.53e-56!42;UBERON:0001893!4.91e-55!34;UBERON:0005743!2.09e-54!86;UBERON:0001017!2.11e-54!82;UBERON:0001869!4.35e-54!32;UBERON:0002791!6.37e-52!33;UBERON:0001049!5.21e-50!57;UBERON:0005068!5.21e-50!57;UBERON:0006241!5.21e-50!57;UBERON:0007135!5.21e-50!57;UBERON:0000955!9.79e-49!69;UBERON:0006238!9.79e-49!69;UBERON:0000073!1.82e-48!94;UBERON:0001016!1.82e-48!94;UBERON:0002616!4.43e-48!59;UBERON:0002020!4.48e-46!34;UBERON:0003528!4.48e-46!34;UBERON:0002346!6.56e-46!90;UBERON:0003056!1.66e-42!61;UBERON:0003075!2.20e-40!86;UBERON:0007284!2.20e-40!86;UBERON:0007023!1.04e-32!115;UBERON:0000924!2.17e-28!173;UBERON:0006601!2.17e-28!173;UBERON:0000033!1.36e-27!123;UBERON:0000153!6.31e-26!129;UBERON:0007811!6.31e-26!129;UBERON:0004121!1.28e-24!169;UBERON:0000200!2.84e-22!6;UBERON:0001871!3.88e-22!7;UBERON:0002021!7.58e-19!5;UBERON:0000349!9.10e-19!5;UBERON:0001872!3.51e-12!5;UBERON:0002771!5.72e-12!3;UBERON:0000025!2.39e-11!194;UBERON:0000064!4.06e-09!219;UBERON:0001905!9.93e-09!2;UBERON:0002757!9.93e-09!2;UBERON:0010134!9.93e-09!2;UBERON:0002784!9.93e-09!2;UBERON:0005408!9.93e-09!2;UBERON:0001899!9.93e-09!2;UBERON:0001954!1.07e-08!2;UBERON:0003022!1.07e-08!2;UBERON:0002421!1.07e-08!2;UBERON:0002600!1.07e-08!2;UBERON:0001876!1.20e-08!2;UBERON:0001870!1.61e-08!2;UBERON:0002360!5.16e-08!2;UBERON:0000094!5.16e-08!2;UBERON:0007645!5.16e-08!2;UBERON:0000483!7.23e-08!309;UBERON:0000119!1.04e-07!312;UBERON:0004111!1.06e-07!241;UBERON:0000475!4.19e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.50e-30;22!UBERON:0000956;1.30e-26;25!UBERON:0000203;1.30e-26;25!UBERON:0001950;2.05e-25;20!UBERON:0001905;5.47e-23;2!UBERON:0002757;5.47e-23;2!UBERON:0010134;5.47e-23;2!UBERON:0005408;5.47e-23;2!UBERON:0001899;5.47e-23;2!UBERON:0001869;6.66e-21;32!UBERON:0002791;7.44e-20;32!UBERON:0001893;3.12e-19;34!UBERON:0000955;4.35e-19;68!UBERON:0003528;5.59e-18;34!UBERON:0002020;5.59e-18;34!UBERON:0002780;2.04e-17;41!UBERON:0001890;2.04e-17;41!UBERON:0001017;3.78e-16;75!UBERON:0001871;4.27e-15;6!UBERON:0000073;1.42e-14;53!UBERON:0002616;1.42e-14;53!UBERON:0003112;3.08e-12;1!UBERON:0011158;3.08e-12;1!UBERON:0003128;3.08e-12;1!UBERON:0001703;3.08e-12;1!UBERON:0002241;3.08e-12;1!UBERON:0003296;5.39e-12;4!UBERON:0010133;5.39e-12;4!UBERON:0002784;5.39e-12;4!UBERON:0001016;6.97e-12;83!UBERON:0002021;4.45e-10;5!UBERON:0000349;4.76e-10;5!UBERON:0000200;2.09e-08;6!UBERON:0002037;2.71e-08;6!UBERON:0007023;6.87e-08;114!UBERON:0001894;3.14e-07;7!UBERON:0002771;4.55e-07;2!UBERON:0001876;4.97e-07;2!UBERON:0001954;5.90e-07;2!UBERON:0003022;5.90e-07;2!UBERON:0002421;5.90e-07;2!UBERON:0002600;5.90e-07;2!UBERON:0002360;9.53e-07;2!UBERON:0002702;9.53e-07;2!UBERON:0000094;9.53e-07;2!UBERON:0010743;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.67e-32,81;UBERON:0002619,2.95e-30,22;UBERON:0000955,3.48e-29,68;UBERON:0006238,3.48e-29,68;UBERON:0001016,9.98e-29,89;UBERON:0000073,5.98e-28,53;UBERON:0002616,5.98e-28,53;UBERON:0000956,1.12e-26,25;UBERON:0000203,1.12e-26,25;UBERON:0001049,2.14e-26,56;UBERON:0005068,2.14e-26,56;UBERON:0006241,2.14e-26,56;UBERON:0007135,2.14e-26,56;UBERON:0001950,1.77e-25,20;UBERON:0002780,3.36e-25,41;UBERON:0001890,3.36e-25,41;UBERON:0003080,3.36e-25,41;UBERON:0006240,3.36e-25,41;UBERON:0001905,7.65e-23,2;UBERON:0002757,7.65e-23,2;UBERON:0010134,7.65e-23,2;UBERON:0005408,7.65e-23,2;UBERON:0001899,7.65e-23,2;UBERON:0007023,8.73e-23,114;UBERON:0002791,7.52e-21,32;UBERON:0001869,7.52e-21,32;UBERON:0003528,1.30e-19,34;UBERON:0002020,1.30e-19,34;UBERON:0001893,1.30e-19,34;UBERON:0003075,1.27e-17,82;UBERON:0007284,1.27e-17,82;UBERON:0002346,9.80e-17,86;UBERON:0003056,1.16e-16,61;UBERON:0001871,4.37e-15,6;UBERON:0004121,3.35e-14,171;UBERON:0000924,3.35e-14,171;UBERON:0006601,3.35e-14,171;UBERON:0010371,1.41e-13,104;UBERON:0010314,2.87e-12,132;UBERON:0003112,4.31e-12,1;UBERON:0011158,4.31e-12,1;UBERON:0003128,4.31e-12,1;UBERON:0001703,4.31e-12,1;UBERON:0002241,4.31e-12,1;UBERON:0004761,4.31e-12,1;UBERON:0009617,4.31e-12,1;UBERON:0003296,6.37e-12,4;UBERON:0010133,6.37e-12,4;UBERON:0002784,6.37e-12,4;UBERON:0011216,6.47e-12,223;UBERON:0002021,4.55e-10,5;UBERON:0000349,4.55e-10,5;UBERON:0000200,1.87e-08,6;UBERON:0002037,2.71e-08,6;UBERON:0006215,2.71e-08,6;UBERON:0001894,3.45e-07,7;UBERON:0006222,3.45e-07,7;UBERON:0002771,4.56e-07,2;UBERON:0001876,4.83e-07,2;UBERON:0001954,5.73e-07,2;UBERON:0003022,5.73e-07,2;UBERON:0002421,5.73e-07,2;UBERON:0002600,5.73e-07,2;UBERON:0002702,8.06e-07,2;UBERON:0002360,9.02e-07,2;UBERON:0000094,9.02e-07,2;UBERON:0010743,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,0.562677665642051,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,3.87733098438087,2.04089815956073,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0,2.65992857058193,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,9.76210119215705,0.751145584238999,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.385375350578757,4.25089728976755,0.798169295285756,7.38418911266718,0.756215088665154,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,1.56215619722769,0.826747186004736,0.443910671357348,0,0,0,0,0,2.67850917939143,1.00885116665647,0,0,0,0,0,0.40781839786099,0.855046056317038,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,1.35982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,0.562677665642051,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,3.87733098438087,2.04089815956073,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0,2.65992857058193,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,9.76210119215705,0.751145584238999,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.385375350578757,4.25089728976755,0.798169295285756,7.38418911266718,0.756215088665154,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,1.56215619722769,0.826747186004736,0.443910671357348,0,0,0,0,0,2.67850917939143,1.00885116665647,0,0,0,0,0,0.40781839786099,0.855046056317038,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,1.35982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:49933222..49933235,- | |||
}} | }} |
Latest revision as of 16:04, 27 July 2015
Short description: | p@chr19:49933222..49933235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49933222..49933235, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data