FF:10037-101F1: Difference between revisions

Latest revision as of 12:16, 3 June 2020

Name:	nucleus accumbens, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10644
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	nucleus accumbens
dev stage	23-56 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Clontech
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	6070307
catalog number	Cat:636569
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005208

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10644		CAGE		DRX008689		DRR009561

Accession ID Hg19

Library id		BAM		CTSS
CNhs10644		DRZ000986		DRZ002371

Accession ID Hg38

Library id		BAM		CTSS
CNhs10644		DRZ012336		DRZ013721

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.346
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.155
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.333
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0525
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.383
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.512
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.027
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.142
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0191
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.0993
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.142
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.0993
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.027
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.17
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.3
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.027
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.027
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.133
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.161
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.218
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-1.018
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.027
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0987
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.394
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0525
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.0525
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.618
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.027
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.18
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0337
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.102
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.416
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.027
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0.027
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.334
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.232
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.537
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.327
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.667
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.027
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.131
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.161
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0.027
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0398
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.697
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.0977
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.583
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.405
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0525
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.198
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.027
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10644

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0106
MA0003.1	MA0003.1	0.358
MA0004.1	MA0004.1	0.469
MA0006.1	MA0006.1	0.369
MA0007.1	MA0007.1	0.215
MA0009.1	MA0009.1	0.212
MA0014.1	MA0014.1	0.687
MA0017.1	MA0017.1	0.0031
MA0018.2	MA0018.2	0.0738
MA0019.1	MA0019.1	0.791
MA0024.1	MA0024.1	0.988
MA0025.1	MA0025.1	0.184
MA0027.1	MA0027.1	0.406
MA0028.1	MA0028.1	0.133
MA0029.1	MA0029.1	0.0541
MA0030.1	MA0030.1	0.193
MA0031.1	MA0031.1	0.972
MA0035.2	MA0035.2	0.128
MA0038.1	MA0038.1	0.0357
MA0039.2	MA0039.2	0.293
MA0040.1	MA0040.1	0.558
MA0041.1	MA0041.1	0.226
MA0042.1	MA0042.1	0.624
MA0043.1	MA0043.1	0.321
MA0046.1	MA0046.1	0.0986
MA0047.2	MA0047.2	0.132
MA0048.1	MA0048.1	0.118
MA0050.1	MA0050.1	0.018
MA0051.1	MA0051.1	0.141
MA0052.1	MA0052.1	0.119
MA0055.1	MA0055.1	0.00286
MA0057.1	MA0057.1	0.944
MA0058.1	MA0058.1	0.434
MA0059.1	MA0059.1	0.0813
MA0060.1	MA0060.1	0.194
MA0061.1	MA0061.1	0.00975
MA0062.2	MA0062.2	0.0351
MA0065.2	MA0065.2	4.9768e-4
MA0066.1	MA0066.1	0.0236
MA0067.1	MA0067.1	0.648
MA0068.1	MA0068.1	0.361
MA0069.1	MA0069.1	0.542
MA0070.1	MA0070.1	0.099
MA0071.1	MA0071.1	0.0255
MA0072.1	MA0072.1	0.418
MA0073.1	MA0073.1	0.37
MA0074.1	MA0074.1	0.211
MA0076.1	MA0076.1	0.328
MA0077.1	MA0077.1	0.28
MA0078.1	MA0078.1	0.793
MA0079.2	MA0079.2	0.376
MA0080.2	MA0080.2	3.85317e-8
MA0081.1	MA0081.1	0.0651
MA0083.1	MA0083.1	0.164
MA0084.1	MA0084.1	0.481
MA0087.1	MA0087.1	0.347
MA0088.1	MA0088.1	0.135
MA0090.1	MA0090.1	0.251
MA0091.1	MA0091.1	0.382
MA0092.1	MA0092.1	0.331
MA0093.1	MA0093.1	0.507
MA0099.2	MA0099.2	7.97974e-11
MA0100.1	MA0100.1	0.841
MA0101.1	MA0101.1	0.00927
MA0102.2	MA0102.2	0.205
MA0103.1	MA0103.1	0.227
MA0104.2	MA0104.2	0.45
MA0105.1	MA0105.1	5.466e-4
MA0106.1	MA0106.1	0.0278
MA0107.1	MA0107.1	0.0124
MA0108.2	MA0108.2	0.341
MA0111.1	MA0111.1	0.442
MA0112.2	MA0112.2	7.95935e-4
MA0113.1	MA0113.1	0.335
MA0114.1	MA0114.1	0.0031
MA0115.1	MA0115.1	0.304
MA0116.1	MA0116.1	0.00374
MA0117.1	MA0117.1	0.912
MA0119.1	MA0119.1	0.0473
MA0122.1	MA0122.1	0.957
MA0124.1	MA0124.1	0.581
MA0125.1	MA0125.1	0.172
MA0131.1	MA0131.1	0.921
MA0135.1	MA0135.1	0.0118
MA0136.1	MA0136.1	6.82446e-10
MA0137.2	MA0137.2	0.62
MA0138.2	MA0138.2	0.285
MA0139.1	MA0139.1	0.378
MA0140.1	MA0140.1	0.0176
MA0141.1	MA0141.1	0.0109
MA0142.1	MA0142.1	0.901
MA0143.1	MA0143.1	0.702
MA0144.1	MA0144.1	0.337
MA0145.1	MA0145.1	0.216
MA0146.1	MA0146.1	0.012
MA0147.1	MA0147.1	0.318
MA0148.1	MA0148.1	0.126
MA0149.1	MA0149.1	0.011
MA0150.1	MA0150.1	0.00183
MA0152.1	MA0152.1	0.865
MA0153.1	MA0153.1	0.637
MA0154.1	MA0154.1	0.035
MA0155.1	MA0155.1	0.701
MA0156.1	MA0156.1	4.90092e-5
MA0157.1	MA0157.1	0.545
MA0159.1	MA0159.1	0.00771
MA0160.1	MA0160.1	0.0339
MA0162.1	MA0162.1	0.109
MA0163.1	MA0163.1	1.73581e-6
MA0164.1	MA0164.1	0.673
MA0258.1	MA0258.1	0.00992
MA0259.1	MA0259.1	0.779

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10644

Novel motif	Logo	P-value
1	1	0.0299
10	10	0.0264
100	100	0.26
101	101	0.717
102	102	0.818
103	103	0.209
104	104	0.163
105	105	0.372
106	106	0.0516
107	107	0.126
108	108	0.771
109	109	0.00923
11	11	0.0136
110	110	0.0458
111	111	0.0536
112	112	0.351
113	113	0.658
114	114	0.0847
115	115	0.951
116	116	0.159
117	117	0.00991
118	118	0.12
119	119	0.0902
12	12	0.838
120	120	0.13
121	121	0.646
122	122	0.564
123	123	0.41
124	124	0.072
125	125	0.177
126	126	0.0343
127	127	0.466
128	128	0.157
129	129	0.543
13	13	0.00207
130	130	0.679
131	131	0.0397
132	132	0.732
133	133	0.0012
134	134	0.296
135	135	0.192
136	136	0.0133
137	137	0.751
138	138	0.818
139	139	0.0777
14	14	0.883
140	140	0.0974
141	141	0.185
142	142	0.772
143	143	0.0109
144	144	0.816
145	145	0.0964
146	146	0.585
147	147	0.926
148	148	0.0932
149	149	0.332
15	15	0.0805
150	150	0.178
151	151	0.595
152	152	0.125
153	153	0.736
154	154	0.576
155	155	0.354
156	156	0.492
157	157	0.494
158	158	0.755
159	159	0.0533
16	16	0.0659
160	160	0.184
161	161	0.254
162	162	0.942
163	163	0.991
164	164	0.0185
165	165	0.0374
166	166	0.86
167	167	0.283
168	168	0.621
169	169	0.00686
17	17	0.151
18	18	0.178
19	19	0.175
2	2	0.984
20	20	0.0864
21	21	0.0868
22	22	0.242
23	23	0.432
24	24	0.136
25	25	0.479
26	26	1.99153e-4
27	27	0.888
28	28	0.723
29	29	0.0121
3	3	0.0287
30	30	0.575
31	31	0.86
32	32	0.0261
33	33	0.0732
34	34	0.803
35	35	0.483
36	36	0.0835
37	37	0.0345
38	38	0.313
39	39	0.271
4	4	0.889
40	40	0.0465
41	41	0.458
42	42	0.193
43	43	0.104
44	44	0.0872
45	45	0.805
46	46	0.0534
47	47	0.0576
48	48	0.0545
49	49	0.12
5	5	0.437
50	50	0.368
51	51	0.51
52	52	0.658
53	53	0.954
54	54	0.467
55	55	0.349
56	56	0.484
57	57	0.23
58	58	0.29
59	59	0.121
6	6	0.569
60	60	0.0831
61	61	0.0874
62	62	0.168
63	63	0.158
64	64	0.173
65	65	0.26
66	66	0.271
67	67	0.329
68	68	0.395
69	69	0.28
7	7	0.0696
70	70	0.0142
71	71	0.0102
72	72	0.449
73	73	0.0419
74	74	0.525
75	75	0.0266
76	76	0.36
77	77	0.188
78	78	0.002
79	79	0.134
8	8	0.0503
80	80	0.976
81	81	0.502
82	82	0.387
83	83	0.219
84	84	0.713
85	85	0.182
86	86	0.203
87	87	0.00611
88	88	0.843
89	89	0.497
9	9	0.545
90	90	0.0365
91	91	0.309
92	92	0.4
93	93	0.784
94	94	0.0575
95	95	0.031
96	96	0.9
97	97	0.778
98	98	0.173
99	99	0.635

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10644

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010037 human nucleus accumbens - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001882 (nucleus accumbens)
0000369 (corpus striatum)
0002435 (striatum)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009663 (telencephalic nucleus)
0002420 (basal ganglion)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0000125 (neural nucleus)
0002020 (gray matter)
0007245 (nuclear complex of neuraxis)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0010009 (aggregate regional part of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000349 (limbic system)
0005403 (ventral striatum)
0010011 (collection of basal ganglia)
0000204 (ventral part of telencephalon)
0000454 (cerebral subcortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010037 (human nucleus accumbens - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000922,UBERON:0000955,UBERON:0001882,UBERON:0000483,UBERON:0000369,UBERON:0002435,UBERON:0000033,UBERON:0000479,UBERON:0002346,UBERON:0000064,UBERON:0000073,UBERON:0004121,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000025,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000477,UBERON:0002020,UBERON:0002791,UBERON:0003528,UBERON:0000481,UBERON:0000467,UBERON:0002616,UBERON:0001062,UBERON:0000119,UBERON:0005291,UBERON:0002308,UBERON:0009663,UBERON:0002420,UBERON:0002780,UBERON:0000125,UBERON:0007245,UBERON:0006598,UBERON:0002532,UBERON:0010009,UBERON:0001017,UBERON:0001016,UBERON:0000153,UBERON:0007811,UBERON:0000924,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0005743,UBERON:0000349,UBERON:0005403,UBERON:0010011,UBERON:0000204,UBERON:0003075,UBERON:0003056,UBERON:0001049,UBERON:0006238,UBERON:0000454,UBERON:0010082,UBERON:0006601,UBERON:0005068,UBERON:0006241,UBERON:0003080,UBERON:0006240,UBERON:0007284,UBERON:0007135
+|DRA_sample_Accession=CAGE@SAMD00005208
+|accession_numbers=CAGE;DRX008689;DRR009561;DRZ000986;DRZ002371;DRZ012336;DRZ013721
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001882,UBERON:0000369,UBERON:0002435,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009663,UBERON:0002420,UBERON:0002616,UBERON:0002780,UBERON:0000125,UBERON:0002020,UBERON:0007245,UBERON:0010317,UBERON:0002308,UBERON:0010009,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000349,UBERON:0005403,UBERON:0010011,UBERON:0000204,UBERON:0000454
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010037
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.52!332.90!TSC22D4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.47!297.19!PEG3;;chr21:34442439..34442455,+!p1@OLIG1!2.36!225.51!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.14!135.59!SOX10;;chr9:114287433..114287513,+!p1@ZNF483!1.98!233.47!ZNF483;;chr11:61520075..61520136,+!p1@C11orf9!1.98!195.71!C11orf9;;chr17:53342311..53342400,+!p1@HLF!1.98!107.39!HLF;;chr21:34398234..34398250,+!p1@OLIG2!1.90!77.65!OLIG2;;chr15:80735246..80735321,+!p3@ARNT2!1.85!69.62!ARNT2;;chr9:77112244..77112262,+!p1@RORB!1.83!73.74!RORB;;chr2:166326200..166326216,+!p1@CSRNP3!1.80!90.05!CSRNP3;;chr14:29235961..29236008,+!p1@FOXG1!1.80!62.50!FOXG1;;chr3:181429704..181429722,+!p1@SOX2!1.78!59.54!SOX2;;chr2:145277882..145277967,-!p3@ZEB2!1.77!96.66!ZEB2;;chr2:2334997..2335053,-!p1@MYT1L!1.76!56.01!MYT1L;;chr8:40755333..40755352,-!p1@ZMAT4!1.70!48.94!ZMAT4;;chr8:53322304..53322340,-!p1@ST18!1.68!46.69!ST18;;chr10:64134120..64134183,+!p1@ZNF365!1.65!52.15!ZNF365;;chr14:29234581..29234601,+!p2@FOXG1!1.65!43.61!FOXG1;;chr15:80733570..80733659,+!p2@ARNT2!1.64!42.33!ARNT2;;chr4:57547454..57547469,-!p1@HOPX!1.63!41.43!HOPX;;chr12:26277817..26277863,-!p2@BHLHE41!1.62!54.85!BHLHE41;;chr2:60781201..60781258,-!p3@BCL11A!1.60!39.05!BCL11A;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.60!38.54!SMARCE1;;chr5:88178983..88179012,-!p1@MEF2C!1.58!270.28!MEF2C;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.58!36.61!POU3F3;;chr17:37764128..37764258,-!p1@NEUROD2!1.56!35.52!NEUROD2;;chr2:95963052..95963106,+!p1@KCNIP3!1.56!35.26!KCNIP3;;chr2:162272785..162272836,+!p1@TBR1!1.53!32.69!TBR1;;chr3:181429741..181429767,+!p2@SOX2!1.52!32.11!SOX2;;chr21:34442540..34442560,+!p2@OLIG1!1.51!31.60!OLIG1;;chr16:1031762..1031781,+!p1@SOX8!1.50!30.51!SOX8;;chr15:80696703..80696754,+!p1@ARNT2!1.43!33.91!ARNT2;;chr14:29236269..29236285,+!p3@FOXG1!1.43!26.08!FOXG1;;chr19:57352109..57352153,-!p2@ZIM2!1.43!25.88!ZIM2;;chr4:81118647..81118666,+!p1@PRDM8!1.42!33.21!PRDM8;;chr12:106976774..106976788,+!p1@RFX4!1.42!25.43!RFX4;;chr14:33403881..33403924,+!p1@NPAS3!1.42!25.11!NPAS3;;chr7:31380292..31380351,-!p1@NEUROD6!1.41!24.92!NEUROD6;;chr1:2461692..2461710,-!p1@HES5!1.39!23.76!HES5;;chr19:13135386..13135435,+!p4@NFIX!1.39!23.51!NFIX;;chr2:73520667..73520683,-!p1@EGR4!1.38!22.74!EGR4;;chrX:85969626..85969664,+!p1@DACH2!1.38!22.74!DACH2;;chrX:82763292..82763317,+!p1@POU3F4!1.36!22.03!POU3F4;;chrX:25034067..25034088,-!p1@ARX!1.34!21.00!ARX;;chr12:54779511..54779577,-!p5@ZNF385A!1.34!21.00!ZNF385A;;chr22:41763452..41763466,+!p2@TEF!1.34!20.87!TEF;;chr7:63505799..63505904,+!p1@ZNF727!1.34!20.81!ZNF727;;chr6:19837592..19837621,+!p1@ID4!1.33!122.29!ID4;;chr12:106976678..106976708,+!p2@RFX4!1.33!20.23!RFX4;;chr19:13135582..13135600,+!p3@NFIX!1.32!20.10!NFIX;;chr2:95963120..95963136,+!p2@KCNIP3!1.31!19.59!KCNIP3;;chr5:88179017..88179046,-!p2@MEF2C!1.30!74.38!MEF2C;;chr19:38085768..38085821,+!p1@ZNF540!1.30!28.13!ZNF540;;chrY:21906594..21906622,-!p1@KDM5D!1.29!18.56!KDM5D;;chr18:53070846..53070902,-!p6@TCF4!1.29!18.50!TCF4;;chr10:134599649..134599653,-!p1@NKX6-2!1.29!18.31!NKX6-2;;chr8:53322347..53322378,-!p2@ST18!1.28!18.05!ST18;;chr1:214161272..214161322,+!p1@PROX1!1.27!24.73!PROX1;;chr4:57522166..57522260,-!p2@HOPX!1.26!19.59!HOPX;;chr11:125034640..125034655,+!p1@PKNOX2!1.26!17.41!PKNOX2;;chr19:46801639..46801699,+!p1@HIF3A!1.26!17.28!HIF3A;;chr8:22550982..22550999,-!p1@EGR3!1.24!45.73!EGR3;;chr11:8102846..8102892,+!p1@TUB!1.23!22.16!TUB;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.23!15.93!POU3F3;;chr11:113930425..113930471,+!p1@ZBTB16!1.22!22.42!ZBTB16;;chr9:126774018..126774055,+!p1@LHX2!1.22!15.67!LHX2;;chr10:48355030..48355090,+!p1@ZNF488!1.21!19.78!ZNF488;;chr19:38720294..38720348,-!p1@DPF1!1.21!19.14!DPF1;;chr1:151032860..151032918,+!p1@MLLT11!1.18!167.06!MLLT11;;chr12:26277956..26277980,-!p1@BHLHE41!1.18!50.68!BHLHE41;;chr17:7492684..7492778,-!p2@SOX15!1.18!30.06!SOX15;;chr19:30863271..30863338,+!p1@ZNF536!1.16!13.36!ZNF536;;chr1:244214577..244214593,+!p1@ZNF238!1.15!13.17!ZNF238;;chrX:118739835..118739862,-!p1@NKRF!1.14!14.26!NKRF;;chr10:64133862..64133884,+!p4@ZNF365!1.14!12.78!ZNF365;;chr10:119302232..119302265,+!p1@EMX2!1.14!12.65!EMX2;;chr7:150974206..150974255,-!p1@SMARCD3!1.13!77.97!SMARCD3;;chr18:55102598..55102623,+!p1@ONECUT2!1.13!12.59!ONECUT2;;chr2:42721205..42721307,+!p4@MTA3!1.12!12.20!MTA3;;chr1:165414325..165414369,-!p1@RXRG!1.12!12.20!RXRG;;chr2:166428839..166428859,+!p2@CSRNP3!1.12!12.08!CSRNP3;;chr2:162272889..162272915,+!p2@TBR1!1.11!12.01!TBR1;;chr19:58545454..58545498,+!p1@ZSCAN1!1.11!12.01!ZSCAN1;;chr3:24536253..24536328,-!p1@THRB!1.10!22.22!THRB;;chr2:145275982..145276003,-!p7@ZEB2!1.10!11.56!ZEB2;;chr6:126112039..126112062,+!p8@NCOA7!1.09!13.62!NCOA7;;chr19:46800289..46800327,+!p2@HIF3A!1.09!11.37!HIF3A;;chr16:85932760..85932775,+!p1@IRF8!1.09!11.24!IRF8;;chr17:70117153..70117174,+!p1@SOX9!1.08!114.78!SOX9;;chr3:141105705..141105770,+!p4@ZBTB38!1.08!13.30!ZBTB38;;chr16:51185318..51185348,-!p2@SALL1!1.08!10.98!SALL1;;chr8:22550530..22550609,-!p2@EGR3!1.08!10.98!EGR3;;chr8:80679993..80680011,-!p1@HEY1!1.07!15.61!HEY1;;chr14:33408072..33408114,+!p2@NPAS3!1.07!12.72!NPAS3;;chr6:126070769..126070801,+!p1@HEY2!1.07!12.46!HEY2;;chr11:31832658..31832681,-!p1@PAX6!1.07!10.85!PAX6;;chr1:8585945..8586056,-!p3@RERE!1.06!35.33!RERE;;chr20:62680984..62680999,-!p1@SOX18!1.06!14.00!SOX18;;chr6:15401104..15401166,+!p5@JARID2!1.06!10.53!JARID2;;chr17:38219209..38219230,+!p1@THRA!1.05!134.56!THRA;;chr1:61548069..61548102,+!p3@NFIA!1.05!24.92!NFIA;;chr2:2335109..2335134,-!p2@MYT1L!1.05!10.34!MYT1L;;chr3:126076242..126076257,-!p1@KLF15!1.04!12.52!KLF15;;chr12:54785074..54785122,-!p2@ZNF385A!1.03!15.22!ZNF385A;;chr3:25469724..25469773,+!p1@RARB!1.03!14.26!RARB;;chr11:125034605..125034636,+!p2@PKNOX2!1.03!9.83!PKNOX2;;chr2:2328299..2328363,-!p3@MYT1L!1.03!9.76!MYT1L;;chr2:2335070..2335098,-!p4@MYT1L!1.03!9.63!MYT1L;;chr3:21792682..21792720,-!p1@ZNF385D!1.02!9.51!ZNF385D;;chr22:41763274..41763318,+!p3@TEF!1.02!9.44!TEF;;chr2:180726291..180726311,-!p1@ZNF385B!1.02!9.38!ZNF385B;;chr1:151032922..151032951,+!p2@MLLT11!1.01!15.48!MLLT11;;chr1:38512457..38512474,-!p1@POU3F1!1.01!10.28!POU3F1;;chr11:66188503..66188511,+!p1@NPAS4!1.01!9.31!NPAS4;;chr19:49140609..49140643,-!p1@DBP!1.00!52.54!DBP;;chr13:72441315..72441454,-!p1@DACH1!1.00!18.24!DACH1;;chr3:24536332..24536358,-!p2@THRB!0.99!8.86!THRB;;chr2:2330039..2330072,-!p6@MYT1L!0.99!8.74!MYT1L;;chr8:30890810..30890880,-!p1@PURG!0.99!8.67!PURG;;chr14:21994337..21994442,-!p1@SALL2!0.98!24.21!SALL2;;chr19:13134772..13134822,+!p2@NFIX!0.98!12.78!NFIX;;chr11:31832862..31832884,-!p2@PAX6!0.98!8.61!PAX6;;chr21:39870339..39870443,-!p1@ERG!0.98!8.48!ERG;;chr10:64133910..64133925,+!p5@ZNF365!0.97!8.41!ZNF365;;chr2:180726331..180726344,-!p5@ZNF385B!0.97!8.41!ZNF385B;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.96!17.66!ZNF395;;chr3:33482052..33482116,-!p2@UBP1!0.96!12.65!UBP1;;chr19:57183114..57183145,-!p1@ZNF835!0.96!9.12!ZNF835;;chr7:96654133..96654150,-!p1@DLX5!0.96!8.22!DLX5;;chr8:93074803..93074845,-!p1@RUNX1T1!0.96!8.16!RUNX1T1;;chr4:57522598..57522664,-!p3@HOPX!0.96!8.03!HOPX;;chr1:40105299..40105326,-!p1@HEYL!0.96!8.03!HEYL;;chr5:138609489..138609542,+!p8@MATR3!0.95!7.96!MATR3;;chr2:42721689..42721723,+!p6@MTA3!0.95!7.96!MTA3;;chr2:2328095..2328125,-!p7@MYT1L!0.95!7.90!MYT1L;;chr12:24102576..24102623,-!p2@SOX5!0.95!7.84!SOX5;;chr7:28725740..28725778,+!p1@CREB5!0.94!71.17!CREB5;;chr22:41777927..41777971,+!p1@TEF!0.94!66.80!TEF;;chr3:141105235..141105307,+!p7@ZBTB38!0.94!7.77!ZBTB38;;chr11:47400078..47400106,-!p1@SPI1!0.94!7.64!SPI1;;chr6:143266185..143266238,-!p2@HIVEP2!0.93!10.60!HIVEP2;;chr15:80696410..80696477,+!p6@ARNT2!0.93!7.58!ARNT2;;chr14:33403648..33403710,+!p3@NPAS3!0.93!7.58!NPAS3;;chr3:114173720..114173794,-!p6@ZBTB20!0.93!7.51!ZBTB20;;chr17:38219143..38219154,+!p2@THRA!0.92!26.59!THRA;;chr2:60780607..60780624,-!p2@BCL11A!0.92!23.51!BCL11A;;chr12:26277929..26277955,-!p3@BHLHE41!0.92!10.66!BHLHE41;;chr1:151032739..151032748,+!p6@MLLT11!0.92!9.38!MLLT11;;chrX:118739782..118739829,-!p2@NKRF!0.92!7.39!NKRF;;chrY:21906761..21906810,-!p2@KDM5D!0.92!7.32!KDM5D;;chr9:126773880..126773895,+!p2@LHX2!0.92!7.32!LHX2;;chr16:51185172..51185197,-!p1@SALL1!0.92!7.32!SALL1;;chr5:178368186..178368238,+!p1@ZNF454!0.91!13.17!ZNF454;;chr2:192015750..192015793,-!p2@STAT4!0.91!9.83!STAT4;;chr1:167298300..167298319,+!p2@POU2F1!0.91!7.13!POU2F1;;chr12:52437488..52437507,+!p2@NR4A1!0.91!7.13!NR4A1;;chr8:145560371..145560449,-!p1@SCRT1!0.91!7.13!SCRT1;;chr9:77112225..77112238,+!p2@RORB!0.91!7.13!RORB;;chr17:38256822..38256851,-!p1@NR1D1!0.90!57.74!NR1D1;;chr7:14029283..14029311,-!p1@ETV1!0.90!38.34!ETV1;;chr1:164528340..164528379,+!p4@PBX1!0.90!17.79!PBX1;;chr3:114819124..114819200,-!p3@ZBTB20!0.90!16.57!ZBTB20;;chr15:31658288..31658338,+!p4@KLF13!0.90!6.94!KLF13;;chr14:29237009..29237049,+!p4@FOXG1!0.90!6.94!FOXG1;;chr11:125034586..125034604,+!p3@PKNOX2!0.90!6.87!PKNOX2;;chr21:34442584..34442587,+!p3@OLIG1!0.90!6.87!OLIG1;;chr2:166428861..166428883,+!p3@CSRNP3!0.90!6.87!CSRNP3;;chrX:101186981..101187030,-!p1@ZMAT1!0.89!23.12!ZMAT1;;chr19:49139477..49139552,-!p4@DBP!0.89!8.80!DBP;;chr10:64134045..64134083,+!p3@ZNF365!0.89!6.74!ZNF365;;chr6:126112074..126112144,+!p1@NCOA7!0.88!92.49!NCOA7;;chr6:1312325..1312340,+!p1@FOXQ1!0.88!11.05!FOXQ1;;chr11:8102819..8102845,+!p3@TUB!0.88!8.35!TUB;;chr19:37998036..37998098,+!p2@ZNF793!0.88!8.35!ZNF793;;chr6:108487289..108487302,+!p1@NR2E1!0.88!6.62!NR2E1;;chr7:96635178..96635181,+!p1@DLX6!0.88!6.62!DLX6;;chr2:2328725..2328739,-!p5@MYT1L!0.88!6.62!MYT1L;;chr5:71803177..71803255,-!p1@ZNF366!0.88!6.55!ZNF366;;chr7:73038839..73038862,-!p1@MLXIPL!0.88!6.55!MLXIPL;;chr15:31618903..31618962,+!p3@KLF13!0.87!18.24!KLF13;;chr5:92920256..92920282,+!p7@NR2F1!0.87!7.84!NR2F1;;chr18:53070913..53070933,-!p16@TCF4!0.87!6.42!TCF4;;chr18:55102628..55102646,+!p2@ONECUT2!0.87!6.36!ONECUT2;;chr2:45168997..45169020,+!p4@SIX3!0.87!6.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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000454;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002308;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002435;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009663
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/nucleus%2520accumbens%252c%2520adult%252c%2520pool1.CNhs10644.10037-101F1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/nucleus%2520accumbens%252c%2520adult%252c%2520pool1.CNhs10644.10037-101F1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/nucleus%2520accumbens%252c%2520adult%252c%2520pool1.CNhs10644.10037-101F1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/nucleus%2520accumbens%252c%2520adult%252c%2520pool1.CNhs10644.10037-101F1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/nucleus%2520accumbens%252c%2520adult%252c%2520pool1.CNhs10644.10037-101F1.hg38.nobarcode.ctss.bed.gz
 |id=FF:10037-101F1
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010037
+|is_a=EFO:0002091;;FF:0010037
+|is_obsolete=
+|library_id=CNhs10644
+|library_id_phase_based=2:CNhs10644
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10037
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10037
 |name=nucleus accumbens, adult, pool1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10644,LSID658,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=101
 |rna_catalog_number=Cat:636569
@@ Line 57: / Line 79: @@
 |rna_weight_ug=50
 |sample_age=
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=C
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.6163599365558e-299!GO:0005737;cytoplasm;3.8475074026176e-153!GO:0044444;cytoplasmic part;1.75314055362146e-99!GO:0043226;organelle;1.85844514099438e-87!GO:0043229;intracellular organelle;5.16905373430651e-87!GO:0043227;membrane-bound organelle;5.77535492317687e-82!GO:0043231;intracellular membrane-bound organelle;8.08595260766435e-82!GO:0005515;protein binding;2.46279769115386e-63!GO:0044422;organelle part;1.91907487609207e-59!GO:0044446;intracellular organelle part;1.57333255627153e-58!GO:0032991;macromolecular complex;2.56980538139486e-52!GO:0016043;cellular component organization and biogenesis;2.50423348676329e-45!GO:0005739;mitochondrion;4.4903958721466e-39!GO:0031090;organelle membrane;1.466246418559e-38!GO:0033036;macromolecule localization;1.466246418559e-38!GO:0015031;protein transport;3.2688970804968e-38!GO:0008104;protein localization;2.91375925019861e-35!GO:0003723;RNA binding;8.04505079005762e-35!GO:0045184;establishment of protein localization;1.15735481121145e-34!GO:0030529;ribonucleoprotein complex;3.0861126382121e-34!GO:0046907;intracellular transport;2.23469552246848e-30!GO:0043234;protein complex;1.14897161066934e-29!GO:0044429;mitochondrial part;2.56396881513221e-29!GO:0051649;establishment of cellular localization;5.68130336826438e-28!GO:0051641;cellular localization;7.96182780345549e-28!GO:0043233;organelle lumen;1.18857947450325e-27!GO:0031974;membrane-enclosed lumen;1.18857947450325e-27!GO:0016192;vesicle-mediated transport;2.6419163309746e-27!GO:0044428;nuclear part;6.42821101425917e-25!GO:0031975;envelope;7.19116906986859e-25!GO:0031967;organelle envelope;1.07621078581111e-24!GO:0019538;protein metabolic process;1.25032025657908e-23!GO:0006886;intracellular protein transport;1.56485711493426e-22!GO:0044238;primary metabolic process;2.69857403796427e-22!GO:0016071;mRNA metabolic process;3.88341190614712e-22!GO:0005829;cytosol;1.6115440266632e-21!GO:0005794;Golgi apparatus;1.07976129393063e-20!GO:0044237;cellular metabolic process;1.3253306324259e-20!GO:0005740;mitochondrial envelope;1.444962255164e-20!GO:0006396;RNA processing;1.748012165829e-20!GO:0044260;cellular macromolecule metabolic process;2.22277744185444e-20!GO:0031966;mitochondrial membrane;2.58765133895043e-20!GO:0006119;oxidative phosphorylation;3.2746604651762e-20!GO:0031982;vesicle;5.04750472572085e-20!GO:0044267;cellular protein metabolic process;9.05216931531311e-20!GO:0008380;RNA splicing;1.3180354140231e-19!GO:0031410;cytoplasmic vesicle;2.29628739509182e-19!GO:0031988;membrane-bound vesicle;3.09986586249202e-19!GO:0005840;ribosome;5.8728449911338e-19!GO:0043170;macromolecule metabolic process;1.00077284064651e-18!GO:0016023;cytoplasmic membrane-bound vesicle;1.59112275949901e-18!GO:0006397;mRNA processing;2.66033799311193e-18!GO:0019866;organelle inner membrane;9.06750165137564e-18!GO:0006996;organelle organization and biogenesis;1.83171452324866e-17!GO:0005743;mitochondrial inner membrane;1.98253073576211e-17!GO:0000166;nucleotide binding;1.78781553929162e-16!GO:0006512;ubiquitin cycle;4.5084791288723e-16!GO:0065003;macromolecular complex assembly;1.2523050621696e-15!GO:0009058;biosynthetic process;1.41889366870951e-15!GO:0005634;nucleus;2.28725698845436e-15!GO:0031981;nuclear lumen;3.98224283386944e-15!GO:0003735;structural constituent of ribosome;4.28810007555417e-15!GO:0012505;endomembrane system;4.38714201590755e-15!GO:0006412;translation;5.27493546984748e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.50444748245982e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.67189626792238e-14!GO:0043412;biopolymer modification;1.73778014158782e-14!GO:0016462;pyrophosphatase activity;2.03313255257328e-14!GO:0044455;mitochondrial membrane part;2.17611743353687e-14!GO:0016874;ligase activity;8.14971166844926e-14!GO:0006464;protein modification process;8.95890853950252e-14!GO:0022607;cellular component assembly;9.39524531426432e-14!GO:0043687;post-translational protein modification;1.00300843241223e-13!GO:0017111;nucleoside-triphosphatase activity;1.01680344557008e-13!GO:0005746;mitochondrial respiratory chain;1.438954794126e-13!GO:0045045;secretory pathway;1.46716340134993e-13!GO:0005681;spliceosome;3.31504231579171e-13!GO:0048770;pigment granule;4.05730381836282e-13!GO:0042470;melanosome;4.05730381836282e-13!GO:0032553;ribonucleotide binding;7.72655972594307e-13!GO:0032555;purine ribonucleotide binding;7.72655972594307e-13!GO:0050136;NADH dehydrogenase (quinone) activity;8.03346306771176e-13!GO:0003954;NADH dehydrogenase activity;8.03346306771176e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.03346306771176e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.5752341289241e-13!GO:0007264;small GTPase mediated signal transduction;1.13242924165015e-12!GO:0044249;cellular biosynthetic process;1.3349248977233e-12!GO:0006810;transport;1.75833787862879e-12!GO:0033279;ribosomal subunit;3.43968761411377e-12!GO:0030135;coated vesicle;4.38454537854021e-12!GO:0048193;Golgi vesicle transport;4.46684535096772e-12!GO:0017076;purine nucleotide binding;4.70512190352791e-12!GO:0007399;nervous system development;1.8048354795854e-11!GO:0006457;protein folding;2.29930894668685e-11!GO:0030695;GTPase regulator activity;3.55777222747367e-11!GO:0043005;neuron projection;3.62489250117638e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.29503679915454e-11!GO:0042773;ATP synthesis coupled electron transport;4.29503679915454e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.3403717358804e-11!GO:0045271;respiratory chain complex I;4.3403717358804e-11!GO:0005747;mitochondrial respiratory chain complex I;4.3403717358804e-11!GO:0009059;macromolecule biosynthetic process;4.95489432379866e-11!GO:0031980;mitochondrial lumen;5.15702597658983e-11!GO:0005759;mitochondrial matrix;5.15702597658983e-11!GO:0008092;cytoskeletal protein binding;6.00443507642525e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.25582385211232e-11!GO:0043283;biopolymer metabolic process;7.87690275870796e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.10750903256534e-11!GO:0044431;Golgi apparatus part;2.02603883576563e-10!GO:0019829;cation-transporting ATPase activity;2.35216450234812e-10!GO:0005783;endoplasmic reticulum;3.17027006087837e-10!GO:0003924;GTPase activity;3.32173261302539e-10!GO:0051179;localization;3.32173261302539e-10!GO:0006793;phosphorus metabolic process;3.50682869325905e-10!GO:0006796;phosphate metabolic process;3.50682869325905e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.63784072767575e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;4.41914919421761e-10!GO:0006511;ubiquitin-dependent protein catabolic process;5.34654914124331e-10!GO:0051234;establishment of localization;6.41015339739399e-10!GO:0005768;endosome;6.47824720910741e-10!GO:0019941;modification-dependent protein catabolic process;7.35546782544616e-10!GO:0043632;modification-dependent macromolecule catabolic process;7.35546782544616e-10!GO:0022618;protein-RNA complex assembly;7.92214724621219e-10!GO:0005083;small GTPase regulator activity;9.77925595790968e-10!GO:0005654;nucleoplasm;9.86750762309542e-10!GO:0044257;cellular protein catabolic process;1.10578207135965e-09!GO:0006605;protein targeting;1.10853267560464e-09!GO:0051082;unfolded protein binding;1.47966843402289e-09!GO:0016044;membrane organization and biogenesis;1.94387529594103e-09!GO:0044445;cytosolic part;2.29180745834184e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.11752011667425e-09!GO:0008135;translation factor activity, nucleic acid binding;3.59181984490628e-09!GO:0008639;small protein conjugating enzyme activity;3.72190606413316e-09!GO:0032940;secretion by cell;3.75294506535094e-09!GO:0044265;cellular macromolecule catabolic process;4.6498700158466e-09!GO:0008565;protein transporter activity;6.14398006214759e-09!GO:0004842;ubiquitin-protein ligase activity;6.16478164487616e-09!GO:0019787;small conjugating protein ligase activity;6.84019726265705e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.32388554415988e-09!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.38920959168355e-09!GO:0044451;nucleoplasm part;1.01214978321915e-08!GO:0005525;GTP binding;1.37236920008019e-08!GO:0030136;clathrin-coated vesicle;1.56925604348075e-08!GO:0007010;cytoskeleton organization and biogenesis;2.25470396222931e-08!GO:0015986;ATP synthesis coupled proton transport;2.36828949174663e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.36828949174663e-08!GO:0008134;transcription factor binding;3.49921102459467e-08!GO:0000502;proteasome complex (sensu Eukaryota);3.66328941382366e-08!GO:0006461;protein complex assembly;4.23641883194959e-08!GO:0016881;acid-amino acid ligase activity;6.06590529869781e-08!GO:0043285;biopolymer catabolic process;6.33739916122443e-08!GO:0030163;protein catabolic process;6.43558628738862e-08!GO:0019226;transmission of nerve impulse;6.47859621983645e-08!GO:0043228;non-membrane-bound organelle;6.76382107027331e-08!GO:0043232;intracellular non-membrane-bound organelle;6.76382107027331e-08!GO:0044248;cellular catabolic process;7.31652787222259e-08!GO:0000139;Golgi membrane;8.063031008382e-08!GO:0007242;intracellular signaling cascade;9.17192980635647e-08!GO:0051186;cofactor metabolic process;1.18987804847338e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.86250780876204e-07!GO:0009060;aerobic respiration;2.04846827073199e-07!GO:0032561;guanyl ribonucleotide binding;2.07357739242187e-07!GO:0019001;guanyl nucleotide binding;2.07357739242187e-07!GO:0015935;small ribosomal subunit;2.07590749868941e-07!GO:0032559;adenyl ribonucleotide binding;2.20231949281404e-07!GO:0015631;tubulin binding;2.70870560630353e-07!GO:0016310;phosphorylation;2.78147582398702e-07!GO:0045333;cellular respiration;2.88597674602378e-07!GO:0030036;actin cytoskeleton organization and biogenesis;3.63000298643978e-07!GO:0048471;perinuclear region of cytoplasm;3.956173540905e-07!GO:0019717;synaptosome;5.68642649250257e-07!GO:0009057;macromolecule catabolic process;5.70181825740916e-07!GO:0048475;coated membrane;5.99060150607072e-07!GO:0030117;membrane coat;5.99060150607072e-07!GO:0005524;ATP binding;6.5967443647332e-07!GO:0046034;ATP metabolic process;7.15484153908756e-07!GO:0044440;endosomal part;7.91309008534577e-07!GO:0010008;endosome membrane;7.91309008534577e-07!GO:0030425;dendrite;8.35484523087648e-07!GO:0006446;regulation of translational initiation;1.00142659116273e-06!GO:0030554;adenyl nucleotide binding;1.08524975457602e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.14361334393934e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.19988951609261e-06!GO:0000375;RNA splicing, via transesterification reactions;1.19988951609261e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.19988951609261e-06!GO:0003743;translation initiation factor activity;1.2726732705508e-06!GO:0006754;ATP biosynthetic process;1.27733097142214e-06!GO:0006753;nucleoside phosphate metabolic process;1.27733097142214e-06!GO:0006163;purine nucleotide metabolic process;1.3499620202726e-06!GO:0006413;translational initiation;1.3499620202726e-06!GO:0016604;nuclear body;1.38450196698194e-06!GO:0010467;gene expression;1.39906606190336e-06!GO:0015630;microtubule cytoskeleton;1.47055322020832e-06!GO:0009141;nucleoside triphosphate metabolic process;1.49381500185418e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.55142242759531e-06!GO:0016607;nuclear speck;1.74806096001889e-06!GO:0006164;purine nucleotide biosynthetic process;1.7621656601357e-06!GO:0006913;nucleocytoplasmic transport;2.15899740246504e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.22066817737807e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.22066817737807e-06!GO:0009150;purine ribonucleotide metabolic process;2.30301532225599e-06!GO:0019899;enzyme binding;2.40011764555819e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.56374580698331e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.62795462029228e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.76703499179019e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.93099961420423e-06!GO:0030029;actin filament-based process;2.93893816467727e-06!GO:0051169;nuclear transport;3.05905912382593e-06!GO:0009259;ribonucleotide metabolic process;3.29464894664375e-06!GO:0044432;endoplasmic reticulum part;3.48063073091625e-06!GO:0005905;coated pit;4.19484809983409e-06!GO:0006897;endocytosis;4.20562976833213e-06!GO:0010324;membrane invagination;4.20562976833213e-06!GO:0008287;protein serine/threonine phosphatase complex;4.26112630766315e-06!GO:0006099;tricarboxylic acid cycle;4.6094299189479e-06!GO:0046356;acetyl-CoA catabolic process;4.6094299189479e-06!GO:0031965;nuclear membrane;5.03382258334854e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.23489715362306e-06!GO:0009055;electron carrier activity;5.28896070938579e-06!GO:0006732;coenzyme metabolic process;5.28896070938579e-06!GO:0007268;synaptic transmission;5.51014354281687e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.64353453971957e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.64353453971957e-06!GO:0003779;actin binding;5.82875256599199e-06!GO:0009142;nucleoside triphosphate biosynthetic process;6.71199503752668e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.71199503752668e-06!GO:0005761;mitochondrial ribosome;7.01125113343647e-06!GO:0000313;organellar ribosome;7.01125113343647e-06!GO:0007265;Ras protein signal transduction;7.37856269864091e-06!GO:0005798;Golgi-associated vesicle;7.92173137397572e-06!GO:0031252;leading edge;8.0600257885258e-06!GO:0009260;ribonucleotide biosynthetic process;8.06277673635616e-06!GO:0051056;regulation of small GTPase mediated signal transduction;9.2240931714812e-06!GO:0005770;late endosome;1.01498024476059e-05!GO:0008021;synaptic vesicle;1.21227770947787e-05!GO:0015934;large ribosomal subunit;1.37562523425881e-05!GO:0032446;protein modification by small protein conjugation;1.47173990196999e-05!GO:0009109;coenzyme catabolic process;1.47173990196999e-05!GO:0006084;acetyl-CoA metabolic process;1.82778133320904e-05!GO:0005635;nuclear envelope;2.0289413633688e-05!GO:0005769;early endosome;2.07107772714298e-05!GO:0042623;ATPase activity, coupled;2.11565483227384e-05!GO:0016567;protein ubiquitination;2.20919638213943e-05!GO:0008047;enzyme activator activity;2.25623386870183e-05!GO:0045259;proton-transporting ATP synthase complex;2.32693233513093e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.50716143251672e-05!GO:0030120;vesicle coat;2.50716143251672e-05!GO:0030662;coated vesicle membrane;2.50716143251672e-05!GO:0016887;ATPase activity;2.53686357009816e-05!GO:0005874;microtubule;2.75667158015412e-05!GO:0005789;endoplasmic reticulum membrane;2.93220282806924e-05!GO:0005096;GTPase activator activity;3.07464334638069e-05!GO:0005730;nucleolus;3.64472646278964e-05!GO:0048489;synaptic vesicle transport;3.78778089442181e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.93105260891663e-05!GO:0008654;phospholipid biosynthetic process;6.52691360923213e-05!GO:0000902;cell morphogenesis;7.367666561252e-05!GO:0032989;cellular structure morphogenesis;7.367666561252e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.49031679795922e-05!GO:0051187;cofactor catabolic process;8.3411472344809e-05!GO:0051128;regulation of cellular component organization and biogenesis;9.72383859926725e-05!GO:0008017;microtubule binding;0.00010283768044588!GO:0006888;ER to Golgi vesicle-mediated transport;0.000103810320750684!GO:0048523;negative regulation of cellular process;0.000107725305620071!GO:0003712;transcription cofactor activity;0.000127374352115273!GO:0016301;kinase activity;0.000128207225651983!GO:0006613;cotranslational protein targeting to membrane;0.00013644060723554!GO:0017038;protein import;0.000139000901472583!GO:0005085;guanyl-nucleotide exchange factor activity;0.00015140139677074!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000161049426204131!GO:0030133;transport vesicle;0.000168829317029682!GO:0009056;catabolic process;0.00018089416277267!GO:0007269;neurotransmitter secretion;0.000203073096475756!GO:0004721;phosphoprotein phosphatase activity;0.000221569522445434!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000221569522445434!GO:0015399;primary active transmembrane transporter activity;0.000221569522445434!GO:0016311;dephosphorylation;0.000221569522445434!GO:0019208;phosphatase regulator activity;0.000236091369376578!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000244332799732437!GO:0005773;vacuole;0.000261630668438116!GO:0046467;membrane lipid biosynthetic process;0.000266454957195612!GO:0030027;lamellipodium;0.000272953578575444!GO:0000151;ubiquitin ligase complex;0.000305068371340487!GO:0001505;regulation of neurotransmitter levels;0.000312049699512198!GO:0019902;phosphatase binding;0.000317539918035015!GO:0016791;phosphoric monoester hydrolase activity;0.000367829989233255!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000374713620130635!GO:0051246;regulation of protein metabolic process;0.000384251764298716!GO:0030118;clathrin coat;0.000386073516429675!GO:0006403;RNA localization;0.000387325189629356!GO:0045786;negative regulation of progression through cell cycle;0.000426528277117814!GO:0016568;chromatin modification;0.000461179674564785!GO:0050657;nucleic acid transport;0.000463243529225818!GO:0051236;establishment of RNA localization;0.000463243529225818!GO:0050658;RNA transport;0.000463243529225818!GO:0043492;ATPase activity, coupled to movement of substances;0.000469838331384702!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000473123915815711!GO:0006650;glycerophospholipid metabolic process;0.000476941066079222!GO:0005793;ER-Golgi intermediate compartment;0.000485797336370726!GO:0004674;protein serine/threonine kinase activity;0.000539634345607524!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000560244982263498!GO:0045055;regulated secretory pathway;0.000560244982263498!GO:0005643;nuclear pore;0.000578620582957509!GO:0000245;spliceosome assembly;0.000578620582957509!GO:0006470;protein amino acid dephosphorylation;0.000591378910968237!GO:0046578;regulation of Ras protein signal transduction;0.000600205469980405!GO:0005516;calmodulin binding;0.000617900743299671!GO:0015980;energy derivation by oxidation of organic compounds;0.000629723247336159!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000636911971238899!GO:0044453;nuclear membrane part;0.000652907444126172!GO:0030424;axon;0.00065813042704751!GO:0009966;regulation of signal transduction;0.000677237465434832!GO:0007019;microtubule depolymerization;0.000812477258930334!GO:0005741;mitochondrial outer membrane;0.00082543361845528!GO:0000159;protein phosphatase type 2A complex;0.000835103976960937!GO:0048519;negative regulation of biological process;0.000862007118868589!GO:0019888;protein phosphatase regulator activity;0.000889817761162428!GO:0008601;protein phosphatase type 2A regulator activity;0.000893393100874762!GO:0016050;vesicle organization and biogenesis;0.00093080006655293!GO:0016197;endosome transport;0.000987556757940988!GO:0008610;lipid biosynthetic process;0.00107410904185635!GO:0006752;group transfer coenzyme metabolic process;0.00110853785890335!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00111425405609633!GO:0031072;heat shock protein binding;0.0011352896116372!GO:0008026;ATP-dependent helicase activity;0.00116679028268542!GO:0043566;structure-specific DNA binding;0.0011951483246777!GO:0006643;membrane lipid metabolic process;0.0011951483246777!GO:0051188;cofactor biosynthetic process;0.00120230290275816!GO:0050767;regulation of neurogenesis;0.00120440308920458!GO:0005875;microtubule associated complex;0.00127355897139239!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00127802693622403!GO:0016740;transferase activity;0.0013535692223315!GO:0030427;site of polarized growth;0.00137060556487328!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00137480572886157!GO:0003729;mRNA binding;0.00146283515156158!GO:0030384;phosphoinositide metabolic process;0.00154711625624269!GO:0043623;cellular protein complex assembly;0.00154711625624269!GO:0003697;single-stranded DNA binding;0.00159770072861844!GO:0031968;organelle outer membrane;0.00160395614722583!GO:0030426;growth cone;0.0016198495867721!GO:0019867;outer membrane;0.00166370072910728!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00167582520582231!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00183378451872781!GO:0022406;membrane docking;0.00185420063037492!GO:0048278;vesicle docking;0.00185420063037492!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00189193195044489!GO:0006904;vesicle docking during exocytosis;0.00190183343484949!GO:0006891;intra-Golgi vesicle-mediated transport;0.00198374893504631!GO:0048487;beta-tubulin binding;0.00208019846875047!GO:0003724;RNA helicase activity;0.00210894618425686!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00219520015170285!GO:0055083;monovalent inorganic anion homeostasis;0.00219520015170285!GO:0055064;chloride ion homeostasis;0.00219520015170285!GO:0030644;cellular chloride ion homeostasis;0.00219520015170285!GO:0006612;protein targeting to membrane;0.00221049148624498!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00227738770520838!GO:0000323;lytic vacuole;0.00233199662659428!GO:0005764;lysosome;0.00233199662659428!GO:0048699;generation of neurons;0.00238827826313425!GO:0005938;cell cortex;0.00258130426632463!GO:0008154;actin polymerization and/or depolymerization;0.00260513011457058!GO:0031114;regulation of microtubule depolymerization;0.00261012423349778!GO:0007026;negative regulation of microtubule depolymerization;0.00261012423349778!GO:0004386;helicase activity;0.00263929029836964!GO:0016564;transcription repressor activity;0.00274272336076726!GO:0031902;late endosome membrane;0.00275850144596579!GO:0009117;nucleotide metabolic process;0.00288680457841439!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00289072604361982!GO:0042578;phosphoric ester hydrolase activity;0.00290165335341949!GO:0004722;protein serine/threonine phosphatase activity;0.00292975085559585!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00304778514863146!GO:0004812;aminoacyl-tRNA ligase activity;0.00304778514863146!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00304778514863146!GO:0005048;signal sequence binding;0.00308605257171688!GO:0006606;protein import into nucleus;0.00311946952031222!GO:0012506;vesicle membrane;0.00315263279896037!GO:0048167;regulation of synaptic plasticity;0.00315263279896037!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0031911103112918!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0031911103112918!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0031911103112918!GO:0006323;DNA packaging;0.00330943508404491!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00339808482435636!GO:0007266;Rho protein signal transduction;0.00355424720818808!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00368390797942931!GO:0022008;neurogenesis;0.00368702589009544!GO:0051170;nuclear import;0.00370849754640119!GO:0005869;dynactin complex;0.00388598973671974!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00392603104054549!GO:0004667;prostaglandin-D synthase activity;0.00392603104054549!GO:0050802;circadian sleep/wake cycle, sleep;0.00392603104054549!GO:0022410;circadian sleep/wake cycle process;0.00392603104054549!GO:0042749;regulation of circadian sleep/wake cycle;0.00392603104054549!GO:0031901;early endosome membrane;0.0039674166902106!GO:0051427;hormone receptor binding;0.00407025327528292!GO:0016126;sterol biosynthetic process;0.00409900806172939!GO:0006892;post-Golgi vesicle-mediated transport;0.00410643660599883!GO:0007272;ensheathment of neurons;0.00412215670783789!GO:0008366;axon ensheathment;0.00412215670783789!GO:0003714;transcription corepressor activity;0.00419477529629239!GO:0030182;neuron differentiation;0.00419477529629239!GO:0051087;chaperone binding;0.00440126641440251!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00448031723458633!GO:0043038;amino acid activation;0.00448783740016682!GO:0006418;tRNA aminoacylation for protein translation;0.00448783740016682!GO:0043039;tRNA aminoacylation;0.00448783740016682!GO:0030030;cell projection organization and biogenesis;0.00459171405468606!GO:0048858;cell projection morphogenesis;0.00459171405468606!GO:0032990;cell part morphogenesis;0.00459171405468606!GO:0009108;coenzyme biosynthetic process;0.00464531332325066!GO:0032011;ARF protein signal transduction;0.00472020608246129!GO:0032012;regulation of ARF protein signal transduction;0.00472020608246129!GO:0005774;vacuolar membrane;0.00473078361656779!GO:0046488;phosphatidylinositol metabolic process;0.00477557971632004!GO:0051028;mRNA transport;0.00489288490501465!GO:0030660;Golgi-associated vesicle membrane;0.0049788385250506!GO:0043209;myelin sheath;0.00555306482497772!GO:0019903;protein phosphatase binding;0.00558782367181842!GO:0051168;nuclear export;0.00562676141936346!GO:0030054;cell junction;0.00568146851932436!GO:0042995;cell projection;0.00581809807921513!GO:0043025;cell soma;0.00610412906065567!GO:0043087;regulation of GTPase activity;0.00627852071937277!GO:0051261;protein depolymerization;0.00637032690546011!GO:0006607;NLS-bearing substrate import into nucleus;0.0065863812959872!GO:0030658;transport vesicle membrane;0.0066517590300814!GO:0035257;nuclear hormone receptor binding;0.00697532025277694!GO:0044433;cytoplasmic vesicle part;0.00699499331747662!GO:0050803;regulation of synapse structure and activity;0.00719991035342406!GO:0006644;phospholipid metabolic process;0.00747594806996836!GO:0050811;GABA receptor binding;0.00759996587840398!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00761088456364096!GO:0019198;transmembrane receptor protein phosphatase activity;0.00761088456364096!GO:0046474;glycerophospholipid biosynthetic process;0.00793819325840333!GO:0044448;cell cortex part;0.00821482003597943!GO:0051920;peroxiredoxin activity;0.00839894944481424!GO:0007017;microtubule-based process;0.00846678668901891!GO:0050839;cell adhesion molecule binding;0.00846678668901891!GO:0009165;nucleotide biosynthetic process;0.00848401723837823!GO:0001508;regulation of action potential;0.0085818339868219!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00863551938862422!GO:0019904;protein domain specific binding;0.00867436125980582!GO:0030867;rough endoplasmic reticulum membrane;0.00875999763176164!GO:0048500;signal recognition particle;0.00875999763176164!GO:0000904;cellular morphogenesis during differentiation;0.00902730722848283!GO:0051540;metal cluster binding;0.00910748832054346!GO:0051536;iron-sulfur cluster binding;0.00910748832054346!GO:0065002;intracellular protein transport across a membrane;0.00934423297689408!GO:0005813;centrosome;0.00980142786320241!GO:0043021;ribonucleoprotein binding;0.00989135936494225!GO:0019887;protein kinase regulator activity;0.0104036742928785!GO:0003713;transcription coactivator activity;0.0104606102803018!GO:0048667;neuron morphogenesis during differentiation;0.0104606102803018!GO:0048812;neurite morphogenesis;0.0104606102803018!GO:0005099;Ras GTPase activator activity;0.0105136176452295!GO:0001726;ruffle;0.0106365702133934!GO:0048666;neuron development;0.0109576690604612!GO:0030258;lipid modification;0.011035136422586!GO:0008250;oligosaccharyl transferase complex;0.0114152723979515!GO:0006665;sphingolipid metabolic process;0.0116306086585125!GO:0006916;anti-apoptosis;0.0125222616742678!GO:0008186;RNA-dependent ATPase activity;0.0125222616742678!GO:0003746;translation elongation factor activity;0.0125222616742678!GO:0006695;cholesterol biosynthetic process;0.0127534658344198!GO:0005791;rough endoplasmic reticulum;0.013085449691563!GO:0001578;microtubule bundle formation;0.0137671531858678!GO:0005839;proteasome core complex (sensu Eukaryota);0.0139523720392614!GO:0035258;steroid hormone receptor binding;0.0141389799468293!GO:0030137;COPI-coated vesicle;0.0141492120608914!GO:0030532;small nuclear ribonucleoprotein complex;0.0142112071127023!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0143057972085761!GO:0030041;actin filament polymerization;0.0143280567022111!GO:0006402;mRNA catabolic process;0.0144196421430327!GO:0005765;lysosomal membrane;0.0146716637090471!GO:0006259;DNA metabolic process;0.0147323729545175!GO:0006414;translational elongation;0.0147565399079794!GO:0031175;neurite development;0.0148404737380917!GO:0031109;microtubule polymerization or depolymerization;0.0148404737380917!GO:0033673;negative regulation of kinase activity;0.0148404737380917!GO:0006469;negative regulation of protein kinase activity;0.0148404737380917!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0150937911745869!GO:0051726;regulation of cell cycle;0.0154843327267056!GO:0009892;negative regulation of metabolic process;0.0162401011768082!GO:0044437;vacuolar part;0.0176438496474659!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0183904455464318!GO:0005815;microtubule organizing center;0.0185554070118211!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.01859885913159!GO:0004683;calmodulin-dependent protein kinase activity;0.0187170561563285!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0187170561563285!GO:0045047;protein targeting to ER;0.0187170561563285!GO:0030659;cytoplasmic vesicle membrane;0.0187696440425358!GO:0030132;clathrin coat of coated pit;0.0189642364404778!GO:0005868;cytoplasmic dynein complex;0.0189642364404778!GO:0004672;protein kinase activity;0.0189642364404778!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0189642364404778!GO:0035035;histone acetyltransferase binding;0.0189642364404778!GO:0000287;magnesium ion binding;0.0190295411418021!GO:0031124;mRNA 3'-end processing;0.0191997542980645!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0197254218959489!GO:0042254;ribosome biogenesis and assembly;0.0199790199528934!GO:0015629;actin cytoskeleton;0.0201517437533096!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.020245914605304!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.020245914605304!GO:0044456;synapse part;0.0203012031987994!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0205144219903437!GO:0007034;vacuolar transport;0.0206646769614425!GO:0008088;axon cargo transport;0.0208337508309286!GO:0000314;organellar small ribosomal subunit;0.021295315792829!GO:0005763;mitochondrial small ribosomal subunit;0.021295315792829!GO:0030742;GTP-dependent protein binding;0.0216010798523177!GO:0046930;pore complex;0.021675097095!GO:0000074;regulation of progression through cell cycle;0.0219349447673071!GO:0030125;clathrin vesicle coat;0.0233243524158937!GO:0030665;clathrin coated vesicle membrane;0.0233243524158937!GO:0005885;Arp2/3 protein complex;0.0235118222734125!GO:0008286;insulin receptor signaling pathway;0.0240148150957425!GO:0019894;kinesin binding;0.0241151063193731!GO:0006661;phosphatidylinositol biosynthetic process;0.0245547589072876!GO:0007611;learning and/or memory;0.0247175956653489!GO:0005100;Rho GTPase activator activity;0.0248585974096668!GO:0045296;cadherin binding;0.0250242729473387!GO:0008361;regulation of cell size;0.0250378558556041!GO:0000059;protein import into nucleus, docking;0.0251955170532817!GO:0046489;phosphoinositide biosynthetic process;0.0255972840230822!GO:0065009;regulation of a molecular function;0.0257238812113934!GO:0006818;hydrogen transport;0.0260601958106508!GO:0008312;7S RNA binding;0.0260840267347351!GO:0005092;GDP-dissociation inhibitor activity;0.0260973617946555!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0265543721922421!GO:0048168;regulation of neuronal synaptic plasticity;0.0265543721922421!GO:0051348;negative regulation of transferase activity;0.0266725332188406!GO:0006366;transcription from RNA polymerase II promoter;0.0271498177235549!GO:0008180;signalosome;0.0272417768007131!GO:0008139;nuclear localization sequence binding;0.0275114156875724!GO:0019207;kinase regulator activity;0.0277201698322785!GO:0004576;oligosaccharyl transferase activity;0.0290371755467477!GO:0004004;ATP-dependent RNA helicase activity;0.0292244137894024!GO:0043407;negative regulation of MAP kinase activity;0.0293708664047558!GO:0000062;acyl-CoA binding;0.0295841449497727!GO:0042552;myelination;0.0297974671952992!GO:0016363;nuclear matrix;0.0302110729398029!GO:0042670;retinal cone cell differentiation;0.0302110729398029!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0302110729398029!GO:0046549;retinal cone cell development;0.0302110729398029!GO:0016079;synaptic vesicle exocytosis;0.0303592198915741!GO:0046839;phospholipid dephosphorylation;0.0308635570657087!GO:0019783;small conjugating protein-specific protease activity;0.0310014491942191!GO:0030119;AP-type membrane coat adaptor complex;0.0310014491942191!GO:0043069;negative regulation of programmed cell death;0.0312819922263197!GO:0048468;cell development;0.0312819922263197!GO:0033130;acetylcholine receptor binding;0.0313035541632827!GO:0008022;protein C-terminus binding;0.0315760462128606!GO:0051287;NAD binding;0.0316338666752108!GO:0031371;ubiquitin conjugating enzyme complex;0.0320152217797417!GO:0050789;regulation of biological process;0.032283860782323!GO:0000209;protein polyubiquitination;0.0324053079132195!GO:0051539;4 iron, 4 sulfur cluster binding;0.0335439919211753!GO:0007409;axonogenesis;0.0339403322951426!GO:0003711;transcription elongation regulator activity;0.0340708283861169!GO:0016615;malate dehydrogenase activity;0.0346754325886873!GO:0006595;polyamine metabolic process;0.0347715371152433!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0349592080398768!GO:0008219;cell death;0.0349592080398768!GO:0016265;death;0.0349592080398768!GO:0015992;proton transport;0.0350838890975415!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0354280159840721!GO:0033043;regulation of organelle organization and biogenesis;0.0354280159840721!GO:0016579;protein deubiquitination;0.0360521036190327!GO:0019911;structural constituent of myelin sheath;0.0360521036190327!GO:0051252;regulation of RNA metabolic process;0.0361738487465785!GO:0030131;clathrin adaptor complex;0.0361738487465785!GO:0043066;negative regulation of apoptosis;0.0367556776643949!GO:0016049;cell growth;0.0367556776643949!GO:0006887;exocytosis;0.0367802743789716!GO:0004843;ubiquitin-specific protease activity;0.0367802743789716!GO:0007612;learning;0.0371279688388522!GO:0004298;threonine endopeptidase activity;0.0377231688283864!GO:0007049;cell cycle;0.0383256298278461!GO:0016070;RNA metabolic process;0.0384756926462845!GO:0006672;ceramide metabolic process;0.0394776642722195!GO:0004221;ubiquitin thiolesterase activity;0.0403819709342714!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0417259184856177!GO:0006376;mRNA splice site selection;0.0419900348365868!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0419900348365868!GO:0043488;regulation of mRNA stability;0.0420160859013657!GO:0043487;regulation of RNA stability;0.0420160859013657!GO:0004423;iduronate-2-sulfatase activity;0.0430177823103718!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0434510881594714!GO:0043681;protein import into mitochondrion;0.0450971311705164!GO:0042802;identical protein binding;0.0450971311705164!GO:0005852;eukaryotic translation initiation factor 3 complex;0.045813118326023!GO:0006611;protein export from nucleus;0.045813118326023!GO:0006378;mRNA polyadenylation;0.0461868161188444!GO:0030663;COPI coated vesicle membrane;0.0467007589710925!GO:0030126;COPI vesicle coat;0.0467007589710925!GO:0007041;lysosomal transport;0.0471519407190997!GO:0030911;TPR domain binding;0.0471519407190997!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.049302607012623!GO:0050749;apolipoprotein E receptor binding;0.049302607012623
 |sample_id=10037
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=nucleus accumbens
 |top_motifs=EGR1..3:4.27032870351;REST:4.2233675934;NHLH1,2:4.08693382917;MYFfamily:3.9576861639;AHR_ARNT_ARNT2:3.80438464692;ZFP161:3.73069369632;MED-1{core}:3.64681973629;PRRX1,2:3.58941422963;RFX1:3.58625786871;MTE{core}:3.55097693688;ATF2:3.47721041067;RREB1:3.24261941421;ZBTB6:3.22860617041;PAX5:3.22641738852;OCT4_SOX2{dimer}:3.03638256017;TFAP2B:3.02565133813;CUX2:2.95925364054;MZF1:2.93997075308;GTF2I:2.91804464166;HIC1:2.87177513928;MTF1:2.86970349373;RFX2..5_RFXANK_RFXAP:2.84825854971;SOX2:2.80210718512;PRDM1:2.80078555019;SOX5:2.68311659905;NKX2-3_NKX2-5:2.63794717718;BREu{core}:2.58930555726;SMAD1..7,9:2.52433517117;DBP:2.50965884867;NANOG:2.48197406753;SOX{8,9,10}:2.40359546932;TGIF1:2.33941120011;POU6F1:2.32357029521;LMO2:2.32203206361;MAZ:2.32138898499;NKX3-2:2.3197732737;PATZ1:2.26291294985;HOXA9_MEIS1:2.11510755522;SOX17:2.09400767902;FOXM1:2.09337206568;JUN:2.03870285271;POU5F1:2.03779733851;HBP1_HMGB_SSRP1_UBTF:2.03142199219;MAFB:2.00037193052;GFI1B:1.85853323128;NRF1:1.79782874382;RBPJ:1.78817535543;GCM1,2:1.74920927309;TFDP1:1.73667428685;NFIX:1.70872056886;EP300:1.63504865519;LEF1_TCF7_TCF7L1,2:1.618221466;EBF1:1.61360301566;CDC5L:1.53818718405;SP1:1.51287501695;GATA4:1.49315868799;FOX{F1,F2,J1}:1.48391189695;ADNP_IRX_SIX_ZHX:1.47514429167;PAX6:1.43250650724;XBP1:1.40325188865;TLX2:1.39773478084;KLF4:1.35516192955;MYOD1:1.34241659269;GTF2A1,2:1.29198398326;ZNF238:1.27571486135;HOX{A4,D4}:1.27518958465;NFIL3:1.26542444301;ARID5B:1.23790760184;HMGA1,2:1.18691158484;ESRRA:1.17161331062;SREBF1,2:1.17049272992;CRX:1.04749051458;POU3F1..4:1.02160064427;CREB1:0.952991641266;HAND1,2:0.948906275725;ALX1:0.941706454401;ZNF423:0.930234045763;FOXN1:0.918874913643;ZNF143:0.911320571171;RORA:0.900188867757;HMX1:0.889630988269;MEF2{A,B,C,D}:0.872475306853;STAT1,3:0.872411323616;GFI1:0.842705753056;FOXP3:0.796247587869;TFAP2{A,C}:0.793718329446;T:0.792691725409;PBX1:0.760567366042;ZEB1:0.721370975057;NKX6-1,2:0.719403630478;FOXQ1:0.718504090982;VSX1,2:0.657060566957;ONECUT1,2:0.637642514244;ZIC1..3:0.63669570231;TLX1..3_NFIC{dimer}:0.591764250723;YY1:0.538175713941;TBX4,5:0.538077390932;FOXP1:0.524031295774;BPTF:0.518761007374;ZNF384:0.484846311544;SPZ1:0.47649144113;MYBL2:0.458448015353;PAX1,9:0.457140202432;FOX{D1,D2}:0.454288496626;ATF5_CREB3:0.435303106827;bHLH_family:0.421812483231;NR3C1:0.384628679776;AR:0.367462597733;ATF4:0.356894167757;XCPE1{core}:0.351030368304;GZF1:0.335138891844;PDX1:0.30871789012;PAX2:0.231070069701;LHX3,4:0.134011233187;FOX{I1,J2}:0.119671407096;NFY{A,B,C}:0.0991551945353;IRF7:-0.0330992057697;IKZF1:-0.0793769720466;POU1F1:-0.0846638451346;HOX{A6,A7,B6,B7}:-0.116179063589;NFE2L2:-0.122992381177;SNAI1..3:-0.125917692428;NANOG{mouse}:-0.172851784003;HSF1,2:-0.174410747243;NFATC1..3:-0.204592435637;PAX3,7:-0.216933039508;PAX4:-0.237006897104;TFAP4:-0.239545483858;TEF:-0.272977061829;GATA6:-0.302266930915;FOXD3:-0.350429837441;IKZF2:-0.359074039005;ZNF148:-0.396727205889;PAX8:-0.398494297676;FOXO1,3,4:-0.400433437684;FOXA2:-0.422777744036;TOPORS:-0.447310509405;NR5A1,2:-0.458331988498;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.463072801399;SPI1:-0.480223424539;IRF1,2:-0.484727949622;NFE2:-0.485864944367;TFCP2:-0.51949691668;STAT2,4,6:-0.551559013824;DMAP1_NCOR{1,2}_SMARC:-0.627880594069;NFE2L1:-0.634711288162;SPIB:-0.680480100666;ETS1,2:-0.688127348841;FOXL1:-0.694642161404;CEBPA,B_DDIT3:-0.715061169937;UFEwm:-0.716616498013;ATF6:-0.749200988441;HNF1A:-0.76016557315;TAL1_TCF{3,4,12}:-0.79975794039;ESR1:-0.805036102273;FOSL2:-0.815809416062;GLI1..3:-0.863335125865;FOS_FOS{B,L1}_JUN{B,D}:-0.877318066231;TP53:-0.894904512153;ELK1,4_GABP{A,B1}:-0.913603550594;NR1H4:-0.920775089322;TEAD1:-0.93531135345;BACH2:-1.00254288186;SRF:-1.02719983428;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08239716518;HIF1A:-1.11654619284;TBP:-1.11920556721;RUNX1..3:-1.12572527792;HNF4A_NR2F1,2:-1.14217289008;NFKB1_REL_RELA:-1.18553241935;HLF:-1.21879684774;MYB:-1.31989517876;RXR{A,B,G}:-1.32457691952;E2F1..5:-1.35922589183;NKX3-1:-1.37833569373;ZBTB16:-1.4024923548;POU2F1..3:-1.43105071055;ELF1,2,4:-1.45196793654;HES1:-1.50960798392;PPARG:-1.51330304328;NKX2-1,4:-1.75832198157;RXRA_VDR{dimer}:-1.76362460337;ALX4:-1.79174792163;STAT5{A,B}:-1.79540850149;NKX2-2,8:-1.80628762244;CDX1,2,4:-1.80845257353;EVI1:-1.82256606458;EN1,2:-1.82278933602;PITX1..3:-1.9369494986;AIRE:-2.50634290409;HOX{A5,B5}:-2.56251986684;NR6A1:-3.09880515875
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10037-101F1;search_select_hide=table117:FF:10037-101F1
 }}

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FF:10037-101F1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:16, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0