FFCP PHASE1:Hg19::chr10:18240814..18240829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221074 | |EntrezGene=221074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20860 | |HGNC=20860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000377374_5end | |association_with_transcript=0bp_to_ENST00000377374_5end | ||
|cluster_id=chr10:18240814..18240829,+ | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_5_at_SLC39A12_5end | |description=CAGE_peak_5_at_SLC39A12_5end | ||
|id=chr10:18240814..18240829,+ | |id=chr10:18240814..18240829,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.64e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001896;1.04e-38;3!UBERON:0005290;1.04e-38;3!UBERON:0001876;1.05e-25;2!UBERON:0002619;1.06e-25;22!UBERON:0000349;5.45e-23;5!UBERON:0000956;1.10e-22;25!UBERON:0000203;1.10e-22;25!UBERON:0000073;1.08e-21;53!UBERON:0002616;1.08e-21;53!UBERON:0001950;8.52e-21;20!UBERON:0001893;7.75e-20;34!UBERON:0002298;1.00e-19;6!UBERON:0002780;1.04e-17;41!UBERON:0001890;1.04e-17;41!UBERON:0002791;4.63e-17;32!UBERON:0001871;1.82e-16;6!UBERON:0001869;3.92e-16;32!UBERON:0003528;1.07e-15;34!UBERON:0002020;1.07e-15;34!UBERON:0002336;3.98e-14;1!UBERON:0011215;3.98e-14;1!UBERON:0001018;3.98e-14;1!UBERON:0002473;3.98e-14;1!UBERON:0005340;3.98e-14;1!UBERON:0003544;3.98e-14;1!UBERON:0005970;3.98e-14;1!UBERON:0002316;3.98e-14;1!UBERON:0001020;3.98e-14;1!UBERON:0002437;3.98e-14;1!UBERON:0003112;1.42e-13;1!UBERON:0011158;1.42e-13;1!UBERON:0003128;1.42e-13;1!UBERON:0001703;1.42e-13;1!UBERON:0002241;1.42e-13;1!UBERON:0001017;5.81e-12;75!UBERON:0001872;6.97e-11;5!UBERON:0004733;3.66e-10;12!UBERON:0002028;3.66e-10;12!UBERON:0004732;2.02e-09;13!UBERON:0007023;4.14e-09;114!UBERON:0001016;2.27e-08;83!UBERON:0000955;9.96e-08;68!UBERON:0005162;1.05e-07;2!UBERON:0000122;1.05e-07;2!UBERON:0002360;1.32e-07;2!UBERON:0001954;1.32e-07;2!UBERON:0000094;1.32e-07;2!UBERON:0003022;1.32e-07;2!UBERON:0002421;1.32e-07;2!UBERON:0002600;1.32e-07;2!UBERON:0010743;1.32e-07;2!UBERON:0001897;1.99e-07;2!UBERON:0010225;1.99e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.27e-94!57;UBERON:0005068!9.27e-94!57;UBERON:0006241!9.27e-94!57;UBERON:0007135!9.27e-94!57;UBERON:0002616!3.07e-85!59;UBERON:0005743!7.04e-79!86;UBERON:0003075!1.87e-75!86;UBERON:0007284!1.87e-75!86;UBERON:0000955!2.08e-75!69;UBERON:0006238!2.08e-75!69;UBERON:0001017!1.86e-74!82;UBERON:0002780!1.77e-72!41;UBERON:0001890!1.77e-72!41;UBERON:0006240!1.77e-72!41;UBERON:0002346!8.71e-72!90;UBERON:0000073!8.16e-71!94;UBERON:0001016!8.16e-71!94;UBERON:0003080!1.21e-70!42;UBERON:0001893!1.76e-63!34;UBERON:0002020!3.01e-63!34;UBERON:0003528!3.01e-63!34;UBERON:0002791!9.46e-60!33;UBERON:0003056!7.54e-59!61;UBERON:0001869!5.82e-56!32;UBERON:0007023!1.63e-52!115;UBERON:0000033!3.74e-50!123;UBERON:0000153!1.74e-47!129;UBERON:0007811!1.74e-47!129;UBERON:0002619!1.70e-41!22;UBERON:0001950!1.55e-39!20;UBERON:0004121!1.96e-38!169;UBERON:0000924!2.25e-37!173;UBERON:0006601!2.25e-37!173;UBERON:0000956!2.64e-36!25;UBERON:0000203!2.64e-36!25;UBERON:0002420!3.64e-31!9;UBERON:0007245!3.64e-31!9;UBERON:0010009!3.64e-31!9;UBERON:0010011!3.64e-31!9;UBERON:0000454!3.64e-31!9;UBERON:0002308!1.25e-30!9;UBERON:0000125!1.25e-30!9;UBERON:0002298!2.11e-27!8;UBERON:0004733!4.37e-23!12;UBERON:0002028!4.37e-23!12;UBERON:0007277!4.37e-23!12;UBERON:0003076!6.65e-23!15;UBERON:0003057!6.65e-23!15;UBERON:0009663!1.85e-22!7;UBERON:0000025!1.89e-22!194;UBERON:0004732!3.27e-21!13;UBERON:0001871!2.21e-20!7;UBERON:0000369!1.26e-18!4;UBERON:0002435!1.26e-18!4;UBERON:0000204!1.26e-18!4;UBERON:0010082!1.26e-18!4;UBERON:0000200!1.76e-18!6;UBERON:0004111!1.42e-16!241;UBERON:0000349!1.31e-15!5;UBERON:0001896!2.13e-15!3;UBERON:0005290!2.13e-15!3;UBERON:0010096!2.13e-15!3;UBERON:0000483!2.72e-15!309;UBERON:0000064!4.09e-15!219;UBERON:0000119!4.57e-15!312;UBERON:0000477!7.65e-15!286;UBERON:0005383!2.27e-14!3;UBERON:0005382!2.27e-14!3;UBERON:0002771!4.08e-14!3;UBERON:0000988!5.34e-14!3;UBERON:0006331!6.39e-14!3;UBERON:0000475!1.45e-12!365;UBERON:0002680!6.07e-12!9;UBERON:0001895!6.07e-12!9;UBERON:0010092!6.07e-12!9;UBERON:0001876!1.10e-10!2;UBERON:0001894!2.67e-10!7;UBERON:0006222!2.67e-10!7;UBERON:0001897!3.36e-10!2;UBERON:0001873!4.04e-10!2;UBERON:0010122!4.04e-10!2;UBERON:0002148!4.63e-10!2;UBERON:0009662!4.63e-10!2;UBERON:0001872!7.08e-09!5;UBERON:0002021!9.50e-09!5;UBERON:0000481!2.43e-08!347;UBERON:0000062!3.44e-07!511 | |||
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|short_description=p5@SLC39A12 | |short_description=p5@SLC39A12 | ||
}} | }} |
Latest revision as of 11:45, 17 September 2015
Short description: | p5@SLC39A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC39A12_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000377374_5end |
EntrezGene: | SLC39A12 |
HGNC: | 20860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data