FFCP PHASE1:Hg19::chr1:160160054..160160076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=844 | |EntrezGene=844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1512 | |HGNC=1512 | ||
|TSSclassifier=strong | |||
|UniProt=P31415 | |UniProt=P31415 | ||
|association_with_transcript=-208bp_to_ENST00000368079,NM_001231,uc010pja.1_5end | |association_with_transcript=-208bp_to_ENST00000368079,NM_001231,uc010pja.1_5end | ||
|cluster_id=chr1:160160054..160160076,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_4_at_CASQ1_5end | |description=CAGE_peak_4_at_CASQ1_5end | ||
|id=chr1:160160054..160160076,+ | |id=chr1:160160054..160160076,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;3.57e-15;2!DOID:178;2.19e-08;1!DOID:326;2.19e-08;1!DOID:3978;2.19e-08;1!DOID:3394;2.19e-08;1!DOID:5844;2.19e-08;1!DOID:1287;5.14e-08;4!DOID:3571;8.12e-08;1 | |ontology_enrichment_celltype_v019_2= | ||
| | |ontology_enrichment_development_v019=UBERON:0005062;5.71e-16;4!UBERON:0007284;5.71e-16;4!UBERON:0006603;2.38e-14;65!UBERON:0003056;1.34e-09;3!UBERON:0010227;2.19e-08;1!UBERON:0004140;2.52e-08;1!UBERON:0010226;3.45e-08;1!UBERON:0009143;4.40e-08;1!UBERON:0005425;8.12e-08;1!UBERON:0004874;8.12e-08;1!UBERON:0003104;5.27e-07;31 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.57e-15;2!DOID:178;2.19e-08;1!DOID:326;2.19e-08;1!DOID:3978;2.19e-08;1!DOID:3394;2.19e-08;1!DOID:5844;2.19e-08;1!DOID:1287;5.14e-08;4!DOID:3571;8.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.45e-15,2;DOID:178,2.04e-08,1;DOID:326,2.04e-08,1;DOID:3978,2.04e-08,1;DOID:3394,2.04e-08,1;DOID:5844,2.04e-08,1;DOID:1287,5.06e-08,4;DOID:3571,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-44!115;UBERON:0002780!1.45e-18!41;UBERON:0001890!1.45e-18!41;UBERON:0006240!1.45e-18!41;UBERON:0001893!5.64e-18!34;UBERON:0003080!5.96e-18!42;UBERON:0001869!7.84e-18!32;UBERON:0002791!7.02e-17!33;UBERON:0002020!2.90e-16!34;UBERON:0003528!2.90e-16!34;UBERON:0001049!8.57e-15!57;UBERON:0005068!8.57e-15!57;UBERON:0006241!8.57e-15!57;UBERON:0007135!8.57e-15!57;UBERON:0000955!1.46e-14!69;UBERON:0006238!1.46e-14!69;UBERON:0002619!4.40e-14!22;UBERON:0002616!5.01e-14!59;UBERON:0001950!5.76e-14!20;UBERON:0005743!6.51e-14!86;UBERON:0001017!7.18e-14!82;UBERON:0000073!9.78e-14!94;UBERON:0001016!9.78e-14!94;UBERON:0000956!1.07e-13!25;UBERON:0000203!1.07e-13!25;UBERON:0003075!1.21e-12!86;UBERON:0007284!1.21e-12!86;UBERON:0003056!2.40e-12!61;UBERON:0002346!1.14e-11!90;UBERON:0000200!5.98e-10!6;UBERON:0003135!1.22e-09!11;UBERON:0000033!1.23e-09!123;UBERON:0000153!1.77e-09!129;UBERON:0007811!1.77e-09!129;UBERON:0004121!2.06e-09!169;UBERON:0000924!6.36e-09!173;UBERON:0006601!6.36e-09!173;UBERON:0007100!1.66e-08!27;UBERON:0000025!1.38e-07!194;UBERON:0000468!2.34e-07!659;UBERON:0001871!3.19e-07!7;UBERON:0004111!4.42e-07!241;UBERON:0003978!9.22e-07!3;UBERON:0009751!9.22e-07!3;UBERON:0000946!9.22e-07!3;UBERON:0002523!9.22e-07!3;UBERON:0005983!9.22e-07!3;UBERON:0002165!9.22e-07!3;UBERON:0002062!9.22e-07!3;UBERON:0007280!9.22e-07!3;UBERON:0004151!9.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.16e-26;25!UBERON:0003978;4.28e-21;3!UBERON:0000946;4.28e-21;3!UBERON:0004151;6.01e-21;3!UBERON:0003135;6.24e-15;11!UBERON:0002081;1.68e-14;2!UBERON:0002133;2.13e-14;2!UBERON:0000948;2.30e-14;22!UBERON:0003101;2.56e-10;22!UBERON:0000079;2.56e-10;22!UBERON:0001723;4.09e-10;3!UBERON:0001033;4.09e-10;3!UBERON:0006947;8.97e-10;3!UBERON:0004054;8.97e-10;3!UBERON:0002146;1.90e-08;1!UBERON:0005623;1.90e-08;1!UBERON:0002079;2.19e-08;1!UBERON:0002135;2.80e-08;1!UBERON:0001389;2.80e-08;1!UBERON:0000026;2.80e-08;1!UBERON:0008784;2.80e-08;1!UBERON:0006058;2.80e-08;1!UBERON:0003663;2.80e-08;1!UBERON:0004256;2.80e-08;1!UBERON:0004708;2.80e-08;1!UBERON:0002101;2.80e-08;1!UBERON:0004709;2.80e-08;1!UBERON:0002529;2.80e-08;1!UBERON:0010538;2.80e-08;1!UBERON:0003661;2.80e-08;1!UBERON:0010890;2.80e-08;1!UBERON:0002471;2.80e-08;1!UBERON:0001383;2.80e-08;1!UBERON:0010758;2.80e-08;1!UBERON:0010707;2.80e-08;1!UBERON:0000978;2.80e-08;1!UBERON:0002103;2.80e-08;1!UBERON:0001665;2.80e-08;1!UBERON:0003823;2.80e-08;1!UBERON:0000154;2.80e-08;1!UBERON:0010709;2.80e-08;1!UBERON:0002084;3.45e-08;1!UBERON:0002082;3.45e-08;1!UBERON:0001301;4.40e-08;1!UBERON:0001000;8.12e-08;1!UBERON:0000989;8.12e-08;1!UBERON:0002134;8.12e-08;1!UBERON:0000941;8.12e-08;1!UBERON:0001785;8.12e-08;1!UBERON:0002464;8.12e-08;1!UBERON:0004904;8.12e-08;1!UBERON:0008811;8.12e-08;1!UBERON:0001021;8.12e-08;1!UBERON:0005208;8.12e-08;1!UBERON:0004145;8.12e-08;1!UBERON:0005946;8.12e-08;1!UBERON:0005352;8.12e-08;1!UBERON:0005965;8.12e-08;1!UBERON:0002078;8.12e-08;1!UBERON:0005904;1.54e-07;4!UBERON:0003103;8.48e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-24,114;UBERON:0007100,8.30e-24,27;UBERON:0003978,3.61e-21,3;UBERON:0009751,3.61e-21,3;UBERON:0000946,3.61e-21,3;UBERON:0002523,3.61e-21,3;UBERON:0005983,3.61e-21,3;UBERON:0002165,3.61e-21,3;UBERON:0002062,3.61e-21,3;UBERON:0007280,3.61e-21,3;UBERON:0004151,4.74e-21,3;UBERON:0003103,5.62e-17,68;UBERON:0003135,5.55e-15,11;UBERON:0002081,1.37e-14,2;UBERON:0010227,1.37e-14,2;UBERON:0002133,1.80e-14,2;UBERON:0000948,4.09e-13,24;UBERON:0005498,4.09e-13,24;UBERON:0004140,4.09e-13,24;UBERON:0009881,4.09e-13,24;UBERON:0004141,4.09e-13,24;UBERON:0003084,4.09e-13,24;UBERON:0007005,4.09e-13,24;UBERON:0004139,4.09e-13,24;UBERON:0004291,4.09e-13,24;UBERON:0003101,2.61e-10,22;UBERON:0000079,2.61e-10,22;UBERON:0001723,4.18e-10,3;UBERON:0001033,4.18e-10,3;UBERON:0010056,4.18e-10,3;UBERON:0006947,9.81e-10,3;UBERON:0004054,9.81e-10,3;UBERON:0004797,2.25e-09,7;UBERON:0002146,1.91e-08,1;UBERON:0005623,1.91e-08,1;UBERON:0002079,2.19e-08,1;UBERON:0005418,2.71e-08,1;UBERON:0001389,2.71e-08,1;UBERON:0000026,2.71e-08,1;UBERON:0008784,2.71e-08,1;UBERON:0006058,2.71e-08,1;UBERON:0003663,2.71e-08,1;UBERON:0004256,2.71e-08,1;UBERON:0004708,2.71e-08,1;UBERON:0002101,2.71e-08,1;UBERON:0004709,2.71e-08,1;UBERON:0002529,2.71e-08,1;UBERON:0010538,2.71e-08,1;UBERON:0003661,2.71e-08,1;UBERON:0010890,2.71e-08,1;UBERON:0002471,2.71e-08,1;UBERON:0001383,2.71e-08,1;UBERON:0004357,2.71e-08,1;UBERON:0004347,2.71e-08,1;UBERON:0005420,2.71e-08,1;UBERON:0005732,2.71e-08,1;UBERON:0010758,2.71e-08,1;UBERON:0010707,2.71e-08,1;UBERON:0000978,2.71e-08,1;UBERON:0002103,2.71e-08,1;UBERON:0001665,2.71e-08,1;UBERON:0003823,2.71e-08,1;UBERON:0000154,2.71e-08,1;UBERON:0010709,2.71e-08,1;UBERON:0005733,2.71e-08,1;UBERON:0005730,2.71e-08,1;UBERON:0002135,2.90e-08,1;UBERON:0002084,3.34e-08,1;UBERON:0002082,3.34e-08,1;UBERON:0010226,3.34e-08,1;UBERON:0001301,5.05e-08,1;UBERON:0000989,5.79e-08,1;UBERON:0008811,5.79e-08,1;UBERON:0006258,5.79e-08,1;UBERON:0005876,5.79e-08,1;UBERON:0004874,5.79e-08,1;UBERON:0002134,6.63e-08,1;UBERON:0005208,6.63e-08,1;UBERON:0005946,6.63e-08,1;UBERON:0005965,6.63e-08,1;UBERON:0002078,6.63e-08,1;UBERON:0000941,7.10e-08,1;UBERON:0001785,7.10e-08,1;UBERON:0002464,7.10e-08,1;UBERON:0004904,7.10e-08,1;UBERON:0001021,7.10e-08,1;UBERON:0003902,7.10e-08,1;UBERON:0005425,7.10e-08,1;UBERON:0001000,8.12e-08,1;UBERON:0005352,8.12e-08,1;UBERON:0005904,1.64e-07,4 | |||
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| ||
|short_description=p4@CASQ1 | |short_description=p4@CASQ1 | ||
}} | }} |
Latest revision as of 01:09, 18 September 2015
Short description: | p4@CASQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CASQ1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -208bp_to_ENST00000368079, NM_001231, uc010pja.1_5end |
EntrezGene: | CASQ1 |
HGNC: | 1512 |
UniProt: | P31415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.45e-15 | 2 |
vascular disease | 2.04e-08 | 1 |
ischemia | 2.04e-08 | 1 |
extrinsic cardiomyopathy | 2.04e-08 | 1 |
myocardial ischemia | 2.04e-08 | 1 |
myocardial infarction | 2.04e-08 | 1 |
cardiovascular system disease | 5.06e-08 | 4 |
liver cancer | 9.29e-08 | 1 |