FFCP PHASE1:Hg19::chr22:24059505..24059562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91316 | |EntrezGene=91316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42325 | |HGNC=42325 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000421064,ENST00000422506,ENST00000431764,ENST00000437294,ENST00000444220,ENST00000445682,ENST00000451837,ENST00000452737,uc010gub.1_5end | |association_with_transcript=0bp_to_ENST00000421064,ENST00000422506,ENST00000431764,ENST00000437294,ENST00000444220,ENST00000445682,ENST00000451837,ENST00000452737,uc010gub.1_5end | ||
|cluster_id=chr22:24059505..24059562,- | |||
|coexpression_cluster_id=C612 | |coexpression_cluster_id=C612 | ||
|description=CAGE_peak_1_at_GUSBP11_5end | |description=CAGE_peak_1_at_GUSBP11_5end | ||
|id=chr22:24059505..24059562,- | |id=chr22:24059505..24059562,- | ||
|ontology_enrichment_celltype=CL:0000738!1.23e-26!140;CL:0000037!1.21e-24!172;CL:0000566!1.21e-24!172;CL:0000988!7.16e-22!182;CL:0002087!1.01e-21!119;CL:0002031!1.37e-21!124;CL:0002032!1.84e-21!165;CL:0000837!1.84e-21!165;CL:0000766!5.85e-16!76;CL:0000839!2.06e-12!70;CL:0002057!3.19e-12!42;CL:0000557!5.50e-12!71;CL:0000763!8.89e-12!112;CL:0000049!8.89e-12!112;CL:0000791!6.04e-11!18;CL:0000789!6.04e-11!18;CL:0002420!6.04e-11!18;CL:0002419!6.04e-11!18;CL:0000790!6.04e-11!18;CL:0002194!8.85e-11!63;CL:0000576!8.85e-11!63;CL:0000040!8.85e-11!63;CL:0000559!8.85e-11!63;CL:0000860!2.18e-10!45;CL:0002009!3.26e-10!65;CL:0000838!3.92e-10!52;CL:0000542!5.99e-10!53;CL:0000051!5.99e-10!53;CL:0000084!8.77e-08!25;CL:0000827!8.77e-08!25;CL:0000625!1.42e-07!11 | |ontology_enrichment_celltype=CL:0000738!1.23e-26!140;CL:0000037!1.21e-24!172;CL:0000566!1.21e-24!172;CL:0000988!7.16e-22!182;CL:0002087!1.01e-21!119;CL:0002031!1.37e-21!124;CL:0002032!1.84e-21!165;CL:0000837!1.84e-21!165;CL:0000766!5.85e-16!76;CL:0000839!2.06e-12!70;CL:0002057!3.19e-12!42;CL:0000557!5.50e-12!71;CL:0000763!8.89e-12!112;CL:0000049!8.89e-12!112;CL:0000791!6.04e-11!18;CL:0000789!6.04e-11!18;CL:0002420!6.04e-11!18;CL:0002419!6.04e-11!18;CL:0000790!6.04e-11!18;CL:0002194!8.85e-11!63;CL:0000576!8.85e-11!63;CL:0000040!8.85e-11!63;CL:0000559!8.85e-11!63;CL:0000860!2.18e-10!45;CL:0002009!3.26e-10!65;CL:0000838!3.92e-10!52;CL:0000542!5.99e-10!53;CL:0000051!5.99e-10!53;CL:0000084!8.77e-08!25;CL:0000827!8.77e-08!25;CL:0000625!1.42e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.35e-11;18!CL:0000789;6.35e-11;18!CL:0002419;6.35e-11;18!CL:0000576;8.21e-09;48!CL:0000766;2.90e-08;69!CL:0002087;6.37e-08;104!CL:0000860;9.20e-08;33!CL:0002057;9.20e-08;33!CL:0000084;9.25e-08;25!CL:0000625;1.42e-07;11!CL:0000473;5.18e-07;39!CL:0000234;5.18e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.34e-29,136;CL:0000037,1.91e-26,168;CL:0000988,6.50e-24,177;CL:0002087,7.86e-24,115;CL:0002031,1.24e-23,120;CL:0002032,3.74e-23,161;CL:0000837,3.74e-23,161;CL:0000766,2.81e-18,72;CL:0000839,1.82e-14,66;CL:0000557,5.71e-14,67;CL:0000763,3.17e-13,108;CL:0000049,3.17e-13,108;CL:0002194,8.89e-13,59;CL:0000576,8.89e-13,59;CL:0000040,8.89e-13,59;CL:0000559,8.89e-13,59;CL:0000473,2.50e-12,48;CL:0000234,2.50e-12,48;CL:0000860,3.19e-12,42;CL:0002057,3.19e-12,42;CL:0002009,4.30e-12,61;CL:0000791,6.04e-11,18;CL:0000789,6.04e-11,18;CL:0002420,6.04e-11,18;CL:0002419,6.04e-11,18;CL:0000790,6.04e-11,18;CL:0000838,3.92e-10,52;CL:0000542,5.99e-10,53;CL:0000051,5.99e-10,53;CL:0000084,8.77e-08,25;CL:0000827,8.77e-08,25;CL:0000625,1.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.35e-11;18!CL:0002057;4.05e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.86e-22!115;UBERON:0001049!3.11e-14!57;UBERON:0005068!3.11e-14!57;UBERON:0006241!3.11e-14!57;UBERON:0007135!3.11e-14!57;UBERON:0002390!6.59e-14!102;UBERON:0003061!6.59e-14!102;UBERON:0002193!9.86e-13!112;UBERON:0002616!4.35e-12!59;UBERON:0003080!5.43e-12!42;UBERON:0002780!5.50e-12!41;UBERON:0001890!5.50e-12!41;UBERON:0006240!5.50e-12!41;UBERON:0001017!7.35e-11!82;UBERON:0000955!8.08e-11!69;UBERON:0006238!8.08e-11!69;UBERON:0005743!4.40e-10!86;UBERON:0000073!4.57e-10!94;UBERON:0001016!4.57e-10!94;UBERON:0001893!1.97e-09!34;UBERON:0002791!3.70e-09!33;UBERON:0002020!4.73e-09!34;UBERON:0003528!4.73e-09!34;UBERON:0001869!1.09e-08!32;UBERON:0002371!1.12e-08!80;UBERON:0001474!1.16e-08!86;UBERON:0002619!7.06e-08!22;UBERON:0002346!1.40e-07!90;UBERON:0001950!2.72e-07!20;UBERON:0003075!3.53e-07!86;UBERON:0007284!3.53e-07!86;UBERON:0002405!6.09e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!5.86e-22!115;UBERON:0001049!3.11e-14!57;UBERON:0005068!3.11e-14!57;UBERON:0006241!3.11e-14!57;UBERON:0007135!3.11e-14!57;UBERON:0002390!6.59e-14!102;UBERON:0003061!6.59e-14!102;UBERON:0002193!9.86e-13!112;UBERON:0002616!4.35e-12!59;UBERON:0003080!5.43e-12!42;UBERON:0002780!5.50e-12!41;UBERON:0001890!5.50e-12!41;UBERON:0006240!5.50e-12!41;UBERON:0001017!7.35e-11!82;UBERON:0000955!8.08e-11!69;UBERON:0006238!8.08e-11!69;UBERON:0005743!4.40e-10!86;UBERON:0000073!4.57e-10!94;UBERON:0001016!4.57e-10!94;UBERON:0001893!1.97e-09!34;UBERON:0002791!3.70e-09!33;UBERON:0002020!4.73e-09!34;UBERON:0003528!4.73e-09!34;UBERON:0001869!1.09e-08!32;UBERON:0002371!1.12e-08!80;UBERON:0001474!1.16e-08!86;UBERON:0002619!7.06e-08!22;UBERON:0002346!1.40e-07!90;UBERON:0001950!2.72e-07!20;UBERON:0003075!3.53e-07!86;UBERON:0007284!3.53e-07!86;UBERON:0002405!6.09e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.19e-09;41!UBERON:0001890;5.19e-09;41!UBERON:0000073;2.42e-08;53!UBERON:0002616;2.42e-08;53!UBERON:0001893;4.57e-08;34!UBERON:0002791;7.22e-08;32!UBERON:0001869;7.99e-08;32!UBERON:0002619;8.47e-08;22!UBERON:0003528;9.12e-08;34!UBERON:0002020;9.12e-08;34!UBERON:0001950;3.30e-07;20!UBERON:0007023;6.71e-07;114 | |||
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| ||
|short_description=p1@GUSBP11 | |short_description=p1@GUSBP11 | ||
}} | }} |
Latest revision as of 09:09, 19 September 2015
Short description: | p1@GUSBP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GUSBP11_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000421064, ENST00000422506, ENST00000431764, ENST00000437294, ENST00000444220, ENST00000445682, ENST00000451837, ENST00000452737, uc010gub.1_5end |
EntrezGene: | GUSBP11 |
HGNC: | 42325 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.09e-21 | 114 |
hematopoietic system | 1.25e-15 | 98 |
blood island | 1.25e-15 | 98 |
hemolymphoid system | 2.93e-14 | 108 |
neural tube | 3.27e-14 | 56 |
neural rod | 3.27e-14 | 56 |
future spinal cord | 3.27e-14 | 56 |
neural keel | 3.27e-14 | 56 |
regional part of nervous system | 1.68e-13 | 53 |
regional part of brain | 1.68e-13 | 53 |
regional part of forebrain | 5.50e-12 | 41 |
forebrain | 5.50e-12 | 41 |
anterior neural tube | 5.50e-12 | 41 |
future forebrain | 5.50e-12 | 41 |
central nervous system | 8.52e-11 | 81 |
brain | 9.20e-11 | 68 |
future brain | 9.20e-11 | 68 |
nervous system | 1.02e-10 | 89 |
immune system | 2.27e-10 | 93 |
bone marrow | 3.94e-10 | 76 |
bone element | 4.75e-10 | 82 |
telencephalon | 1.97e-09 | 34 |
brain grey matter | 4.73e-09 | 34 |
gray matter | 4.73e-09 | 34 |
regional part of telencephalon | 1.02e-08 | 32 |
cerebral hemisphere | 1.09e-08 | 32 |
regional part of cerebral cortex | 7.06e-08 | 22 |
neurectoderm | 1.30e-07 | 86 |
neocortex | 2.72e-07 | 20 |
neural plate | 3.29e-07 | 82 |
presumptive neural plate | 3.29e-07 | 82 |