FFCP PHASE1:Hg19::chr1:87170218..87170234,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:87170218..87170234,+
|short_description=p6@SH3GLB1
|description=CAGE_peak_6_at_SH3GLB1_5end
|association_with_transcript=-18bp_to_NM_001206651,NM_001206652...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51100 | |EntrezGene=51100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10833 | |HGNC=10833 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y371,B4E182 | |UniProt=Q9Y371,B4E182 | ||
|association_with_transcript=-18bp_to_NM_001206651,NM_001206652,NM_001206653,NM_016009_5end | |||
|cluster_id=chr1:87170218..87170234,+ | |||
|description=CAGE_peak_6_at_SH3GLB1_5end | |||
|id=chr1:87170218..87170234,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.86e-09!45;CL:0002057!7.31e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-10;33!CL:0002057;3.35e-10;33!CL:0000473;5.84e-08;39!CL:0000234;5.84e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-09,42;CL:0002057,1.79e-09,42;CL:0000473,9.30e-09,48;CL:0000234,9.30e-09,48;CL:0002194,5.78e-07,59;CL:0000576,5.78e-07,59;CL:0000040,5.78e-07,59;CL:0000559,5.78e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.44e-18!115;UBERON:0001049!1.33e-17!57;UBERON:0005068!1.33e-17!57;UBERON:0006241!1.33e-17!57;UBERON:0007135!1.33e-17!57;UBERON:0001017!2.62e-15!82;UBERON:0003075!3.88e-15!86;UBERON:0007284!3.88e-15!86;UBERON:0000073!4.73e-15!94;UBERON:0001016!4.73e-15!94;UBERON:0003080!5.36e-15!42;UBERON:0005743!5.67e-15!86;UBERON:0002780!7.37e-15!41;UBERON:0001890!7.37e-15!41;UBERON:0006240!7.37e-15!41;UBERON:0002346!2.84e-14!90;UBERON:0004121!2.91e-14!169;UBERON:0002616!4.72e-14!59;UBERON:0000924!8.61e-14!173;UBERON:0006601!8.61e-14!173;UBERON:0000955!1.77e-13!69;UBERON:0006238!1.77e-13!69;UBERON:0000467!1.28e-12!625;UBERON:0000480!1.37e-12!626;UBERON:0000062!2.10e-12!511;UBERON:0000033!2.28e-12!123;UBERON:0003056!3.25e-12!61;UBERON:0000153!5.84e-12!129;UBERON:0007811!5.84e-12!129;UBERON:0000923!7.57e-12!604;UBERON:0005291!7.57e-12!604;UBERON:0006598!7.57e-12!604;UBERON:0002532!7.57e-12!604;UBERON:0002050!7.91e-12!605;UBERON:0005423!7.91e-12!605;UBERON:0001893!1.30e-11!34;UBERON:0000922!1.33e-11!612;UBERON:0002791!2.67e-11!33;UBERON:0002020!5.94e-11!34;UBERON:0003528!5.94e-11!34;UBERON:0001869!7.19e-11!32;UBERON:0000468!1.21e-10!659;UBERON:0002619!7.54e-09!22;UBERON:0000477!2.35e-08!286;UBERON:0004111!2.66e-08!241;UBERON:0000025!2.88e-08!194;UBERON:0001950!4.44e-08!20;UBERON:0000956!1.10e-07!25;UBERON:0000203!1.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.85e-10;41!UBERON:0001890;1.85e-10;41!UBERON:0002791;3.62e-09;32!UBERON:0001869;6.61e-09;32!UBERON:0001893;6.63e-09;34!UBERON:0000073;1.32e-08;53!UBERON:0002616;1.32e-08;53!UBERON:0002619;2.88e-08;22!UBERON:0003528;3.07e-08;34!UBERON:0002020;3.07e-08;34!UBERON:0001950;1.24e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.40e-19,114;UBERON:0001049,1.95e-18,56;UBERON:0005068,1.95e-18,56;UBERON:0006241,1.95e-18,56;UBERON:0007135,1.95e-18,56;UBERON:0000073,1.51e-16,53;UBERON:0002616,1.51e-16,53;UBERON:0001017,4.04e-16,81;UBERON:0002780,5.88e-16,41;UBERON:0001890,5.88e-16,41;UBERON:0003080,5.88e-16,41;UBERON:0006240,5.88e-16,41;UBERON:0001016,1.39e-15,89;UBERON:0003075,1.85e-15,82;UBERON:0007284,1.85e-15,82;UBERON:0010371,1.34e-14,104;UBERON:0002346,2.09e-14,86;UBERON:0000955,1.72e-13,68;UBERON:0006238,1.72e-13,68;UBERON:0003056,4.57e-13,61;UBERON:0004121,1.59e-12,171;UBERON:0000924,1.59e-12,171;UBERON:0006601,1.59e-12,171;UBERON:0010314,3.21e-12,132;UBERON:0001893,3.45e-12,34;UBERON:0001869,2.53e-11,32;UBERON:0002791,3.34e-11,32;UBERON:0003528,3.89e-11,34;UBERON:0002020,3.89e-11,34;UBERON:0002050,4.33e-11,564;UBERON:0000923,4.39e-11,560;UBERON:0010316,4.39e-11,560;UBERON:0005291,4.39e-11,560;UBERON:0006598,4.39e-11,560;UBERON:0010317,4.39e-11,560;UBERON:0002532,4.39e-11,560;UBERON:0005423,1.15e-10,581;UBERON:0000922,2.45e-10,592;UBERON:0002619,7.53e-10,22;UBERON:0001950,6.07e-09,20;UBERON:0000025,6.49e-08,192;UBERON:0011216,6.70e-08,223;UBERON:0000956,1.12e-07,25;UBERON:0000203,1.12e-07,25;UBERON:0004111,2.93e-07,240 | |||
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| ||
|short_description=p6@SH3GLB1 | |||
}} | }} |
Latest revision as of 14:37, 19 September 2015
Short description: | p6@SH3GLB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SH3GLB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_NM_001206651, NM_001206652, NM_001206653, NM_016009_5end |
EntrezGene: | SH3GLB1 |
HGNC: | 10833 |
UniProt: | Q9Y371B4E182 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-09 | 42 |
defensive cell | 9.30e-09 | 48 |
phagocyte | 9.30e-09 | 48 |
monopoietic cell | 5.78e-07 | 59 |
monocyte | 5.78e-07 | 59 |
monoblast | 5.78e-07 | 59 |
promonocyte | 5.78e-07 | 59 |