FFCP PHASE1:Hg19::chr2:45169039..45169058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000419364_5end | |association_with_transcript=-27bp_to_ENST00000419364_5end | ||
|cluster_id=chr2:45169039..45169058,- | |||
|coexpression_cluster_id=C573 | |coexpression_cluster_id=C573 | ||
|description=CAGE_peak_1_at_ENST00000419364_5end | |description=CAGE_peak_1_at_ENST00000419364_5end | ||
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|ontology_enrichment_celltype=CL:0002586!1.07e-08!3;CL:0000064!2.20e-08!3;CL:0005012!2.20e-08!3;CL:0000067!2.20e-08!3;CL:0002304!2.20e-08!3;CL:0002322!2.82e-07!5 | |ontology_enrichment_celltype=CL:0002586!1.07e-08!3;CL:0000064!2.20e-08!3;CL:0005012!2.20e-08!3;CL:0000067!2.20e-08!3;CL:0002304!2.20e-08!3;CL:0002322!2.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002586;3.33e-21;3!CL:0000149;4.67e-16;4!CL:0000064;3.93e-10;3!CL:0000067;3.93e-10;3!CL:0005012;3.93e-10;3!CL:0002304;3.93e-10;3!CL:0000342;4.72e-08;1!CL:0002565;4.72e-08;1!CL:0000147;5.39e-08;14!CL:0000306;6.59e-08;4!CL:0002222;6.59e-08;4!CL:0002224;6.59e-08;4 | |ontology_enrichment_celltype_v019=CL:0002586;3.33e-21;3!CL:0000149;4.67e-16;4!CL:0000064;3.93e-10;3!CL:0000067;3.93e-10;3!CL:0005012;3.93e-10;3!CL:0002304;3.93e-10;3!CL:0000342;4.72e-08;1!CL:0002565;4.72e-08;1!CL:0000147;5.39e-08;14!CL:0000306;6.59e-08;4!CL:0002222;6.59e-08;4!CL:0002224;6.59e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.05e-21,3;CL:0000149,3.26e-16,4;CL:0000064,5.94e-10,3;CL:0000067,5.94e-10,3;CL:0005012,5.94e-10,3;CL:0002304,5.94e-10,3;CL:0000147,4.82e-08,14;CL:0000342,5.07e-08,1;CL:0002565,5.07e-08,1;CL:0000306,6.94e-08,4;CL:0002222,6.94e-08,4;CL:0002224,6.94e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.82e-15;2!UBERON:0003056;2.65e-10;3!UBERON:0006222;2.17e-08;1 | |ontology_enrichment_development_v019=UBERON:0010122;2.82e-15;2!UBERON:0003056;2.65e-10;3!UBERON:0006222;2.17e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.69e-08;4 | |ontology_enrichment_disease_v019=DOID:5409;2.69e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.69e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003056!1.62e-32!61;UBERON:0003075!2.22e-30!86;UBERON:0007284!2.22e-30!86;UBERON:0002346!1.48e-28!90;UBERON:0007625!5.31e-22!11;UBERON:0005743!1.53e-20!86;UBERON:0000073!1.80e-20!94;UBERON:0001016!1.80e-20!94;UBERON:0000033!3.04e-20!123;UBERON:0000970!3.19e-19!20;UBERON:0000153!8.27e-19!129;UBERON:0007811!8.27e-19!129;UBERON:0000020!8.35e-19!23;UBERON:0002104!3.89e-18!21;UBERON:0002616!5.56e-18!59;UBERON:0002780!6.57e-18!41;UBERON:0001890!6.57e-18!41;UBERON:0006240!6.57e-18!41;UBERON:0001032!7.36e-18!24;UBERON:0004456!7.36e-18!24;UBERON:0003080!2.31e-17!42;UBERON:0000019!3.29e-17!19;UBERON:0000047!3.29e-17!19;UBERON:0004088!3.29e-17!19;UBERON:0003072!3.29e-17!19;UBERON:0003071!3.29e-17!19;UBERON:0004128!3.29e-17!19;UBERON:0001049!3.34e-17!57;UBERON:0005068!3.34e-17!57;UBERON:0006241!3.34e-17!57;UBERON:0007135!3.34e-17!57;UBERON:0000955!6.14e-17!69;UBERON:0006238!6.14e-17!69;UBERON:0004121!3.04e-16!169;UBERON:0001017!1.20e-15!82;UBERON:0000924!1.32e-15!173;UBERON:0006601!1.32e-15!173;UBERON:0001893!1.73e-15!34;UBERON:0001456!2.87e-15!21;UBERON:0001869!1.06e-14!32;UBERON:0002791!2.92e-14!33;UBERON:0002420!7.01e-14!9;UBERON:0007245!7.01e-14!9;UBERON:0010009!7.01e-14!9;UBERON:0010011!7.01e-14!9;UBERON:0000454!7.01e-14!9;UBERON:0002020!1.13e-13!34;UBERON:0003528!1.13e-13!34;UBERON:0000966!2.22e-13!5;UBERON:0005388!2.22e-13!5;UBERON:0001802!2.22e-13!5;UBERON:0000369!3.00e-11!4;UBERON:0002435!3.00e-11!4;UBERON:0000204!3.00e-11!4;UBERON:0010082!3.00e-11!4;UBERON:0000488!1.23e-10!4;UBERON:0005085!3.26e-10!29;UBERON:0002308!6.03e-10!9;UBERON:0000125!6.03e-10!9;UBERON:0009663!1.34e-09!7;UBERON:0007023!1.61e-09!115;UBERON:0005383!5.84e-09!3;UBERON:0005382!5.84e-09!3;UBERON:0001781!1.07e-08!3;UBERON:0001782!1.07e-08!3;UBERON:0005424!1.07e-08!3;UBERON:0000349!1.64e-08!5;UBERON:0001778!2.20e-08!3;UBERON:0001775!2.20e-08!3;UBERON:0001801!4.30e-08!14;UBERON:0000064!3.79e-07!219;UBERON:0002203!4.73e-07!6;UBERON:0001768!4.73e-07!6;UBERON:0000956!6.16e-07!25;UBERON:0000203!6.16e-07!25 | |ontology_enrichment_uberon=UBERON:0003056!1.62e-32!61;UBERON:0003075!2.22e-30!86;UBERON:0007284!2.22e-30!86;UBERON:0002346!1.48e-28!90;UBERON:0007625!5.31e-22!11;UBERON:0005743!1.53e-20!86;UBERON:0000073!1.80e-20!94;UBERON:0001016!1.80e-20!94;UBERON:0000033!3.04e-20!123;UBERON:0000970!3.19e-19!20;UBERON:0000153!8.27e-19!129;UBERON:0007811!8.27e-19!129;UBERON:0000020!8.35e-19!23;UBERON:0002104!3.89e-18!21;UBERON:0002616!5.56e-18!59;UBERON:0002780!6.57e-18!41;UBERON:0001890!6.57e-18!41;UBERON:0006240!6.57e-18!41;UBERON:0001032!7.36e-18!24;UBERON:0004456!7.36e-18!24;UBERON:0003080!2.31e-17!42;UBERON:0000019!3.29e-17!19;UBERON:0000047!3.29e-17!19;UBERON:0004088!3.29e-17!19;UBERON:0003072!3.29e-17!19;UBERON:0003071!3.29e-17!19;UBERON:0004128!3.29e-17!19;UBERON:0001049!3.34e-17!57;UBERON:0005068!3.34e-17!57;UBERON:0006241!3.34e-17!57;UBERON:0007135!3.34e-17!57;UBERON:0000955!6.14e-17!69;UBERON:0006238!6.14e-17!69;UBERON:0004121!3.04e-16!169;UBERON:0001017!1.20e-15!82;UBERON:0000924!1.32e-15!173;UBERON:0006601!1.32e-15!173;UBERON:0001893!1.73e-15!34;UBERON:0001456!2.87e-15!21;UBERON:0001869!1.06e-14!32;UBERON:0002791!2.92e-14!33;UBERON:0002420!7.01e-14!9;UBERON:0007245!7.01e-14!9;UBERON:0010009!7.01e-14!9;UBERON:0010011!7.01e-14!9;UBERON:0000454!7.01e-14!9;UBERON:0002020!1.13e-13!34;UBERON:0003528!1.13e-13!34;UBERON:0000966!2.22e-13!5;UBERON:0005388!2.22e-13!5;UBERON:0001802!2.22e-13!5;UBERON:0000369!3.00e-11!4;UBERON:0002435!3.00e-11!4;UBERON:0000204!3.00e-11!4;UBERON:0010082!3.00e-11!4;UBERON:0000488!1.23e-10!4;UBERON:0005085!3.26e-10!29;UBERON:0002308!6.03e-10!9;UBERON:0000125!6.03e-10!9;UBERON:0009663!1.34e-09!7;UBERON:0007023!1.61e-09!115;UBERON:0005383!5.84e-09!3;UBERON:0005382!5.84e-09!3;UBERON:0001781!1.07e-08!3;UBERON:0001782!1.07e-08!3;UBERON:0005424!1.07e-08!3;UBERON:0000349!1.64e-08!5;UBERON:0001778!2.20e-08!3;UBERON:0001775!2.20e-08!3;UBERON:0001801!4.30e-08!14;UBERON:0000064!3.79e-07!219;UBERON:0002203!4.73e-07!6;UBERON:0001768!4.73e-07!6;UBERON:0000956!6.16e-07!25;UBERON:0000203!6.16e-07!25 | ||
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|short_description=p1@ENST00000419364 | |short_description=p1@ENST00000419364 | ||
}} | }} |
Latest revision as of 10:24, 29 July 2015
Short description: | p1@ENST00000419364 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000419364_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | -27bp_to_ENST00000419364_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.05e-21 | 3 |
visual pigment cell | 3.26e-16 | 4 |
ciliated cell | 5.94e-10 | 3 |
ciliated epithelial cell | 5.94e-10 | 3 |
multi-ciliated epithelial cell | 5.94e-10 | 3 |
non-pigmented ciliary epithelial cell | 5.94e-10 | 3 |
pigment cell | 4.82e-08 | 14 |
pigment cell (sensu Vertebrata) | 5.07e-08 | 1 |
iris pigment epithelial cell | 5.07e-08 | 1 |
crystallin accumulating cell | 6.94e-08 | 4 |
vertebrate lens cell | 6.94e-08 | 4 |
lens epithelial cell | 6.94e-08 | 4 |
Ontology term | p-value | n |
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