FFCP PHASE1:Mm9::chr11:54409603..54409630,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192786 | |EntrezGene=192786 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TKC6,Q3TPI6 | |UniProt=Q3TKC6,Q3TPI6 | ||
|association_with_transcript=-17bp_to_ENSMUST00000149372,NM_001252497,NM_001252498,uc007iya.1,uc007iyb.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000149372,NM_001252497,NM_001252498,uc007iya.1,uc007iyb.1_5end | ||
|cluster_id=chr11:54409603..54409630,+ | |||
|description=CAGE_peak_8_at_Rapgef6_5end | |description=CAGE_peak_8_at_Rapgef6_5end | ||
|id=chr11:54409603..54409630,+ | |id=chr11:54409603..54409630,+ | ||
|ontology_enrichment_celltype=CL:0000540!5.71e-17!33;CL:0000047!5.71e-17!33;CL:0000031!5.71e-17!33;CL:0000404!5.71e-17!33;CL:0000117!6.56e-14!23;CL:0000337!6.56e-14!23;CL:0000393!1.62e-12!39;CL:0000211!1.62e-12!39;CL:0002319!6.13e-11!43;CL:0000221!1.96e-10!44;CL:0000133!1.96e-10!44;CL:0000055!6.71e-08!50 | |ontology_enrichment_celltype=CL:0000540!5.71e-17!33;CL:0000047!5.71e-17!33;CL:0000031!5.71e-17!33;CL:0000404!5.71e-17!33;CL:0000117!6.56e-14!23;CL:0000337!6.56e-14!23;CL:0000393!1.62e-12!39;CL:0000211!1.62e-12!39;CL:0002319!6.13e-11!43;CL:0000221!1.96e-10!44;CL:0000133!1.96e-10!44;CL:0000055!6.71e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.50e-15,23;CL:0000337,5.50e-15,23;CL:0000540,2.53e-13,33;CL:0000047,2.53e-13,33;CL:0000031,2.53e-13,33;CL:0000404,2.53e-13,33;CL:0000393,1.65e-10,39;CL:0000211,1.65e-10,39;CL:0002319,4.39e-09,43;CL:0000221,9.05e-09,44;CL:0000133,9.05e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.99e-28!73;UBERON:0005743!2.99e-28!73;UBERON:0000073!1.09e-27!75;UBERON:0001016!1.09e-27!75;UBERON:0002346!8.70e-25!71;UBERON:0003075!8.70e-25!71;UBERON:0007284!8.70e-25!71;UBERON:0004121!3.42e-23!102;UBERON:0000924!3.42e-23!102;UBERON:0006601!3.42e-23!102;UBERON:0001049!3.44e-22!52;UBERON:0005068!3.44e-22!52;UBERON:0006241!3.44e-22!52;UBERON:0007135!3.44e-22!52;UBERON:0000955!1.20e-20!50;UBERON:0006238!1.20e-20!50;UBERON:0002616!5.95e-20!49;UBERON:0002020!3.01e-19!34;UBERON:0000033!3.68e-18!63;UBERON:0003080!1.22e-15!40;UBERON:0002791!1.77e-15!29;UBERON:0003528!1.77e-15!29;UBERON:0001893!1.77e-15!29;UBERON:0003056!6.58e-15!49;UBERON:0002780!7.95e-15!39;UBERON:0001890!7.95e-15!39;UBERON:0006240!7.95e-15!39;UBERON:0000956!1.07e-09!21;UBERON:0001869!1.07e-09!21;UBERON:0000203!1.07e-09!21;UBERON:0007811!3.33e-09!86;UBERON:0002021!4.69e-09!10;UBERON:0000411!4.69e-09!10;UBERON:0001950!4.69e-09!10;UBERON:0002619!6.15e-08!17;UBERON:0002420!2.42e-07!8;UBERON:0007245!2.42e-07!8;UBERON:0010009!2.42e-07!8;UBERON:0010011!2.42e-07!8;UBERON:0000454!2.42e-07!8;UBERON:0003076!2.63e-07!12;UBERON:0003057!2.63e-07!12;UBERON:0000153!3.80e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!2.99e-28!73;UBERON:0005743!2.99e-28!73;UBERON:0000073!1.09e-27!75;UBERON:0001016!1.09e-27!75;UBERON:0002346!8.70e-25!71;UBERON:0003075!8.70e-25!71;UBERON:0007284!8.70e-25!71;UBERON:0004121!3.42e-23!102;UBERON:0000924!3.42e-23!102;UBERON:0006601!3.42e-23!102;UBERON:0001049!3.44e-22!52;UBERON:0005068!3.44e-22!52;UBERON:0006241!3.44e-22!52;UBERON:0007135!3.44e-22!52;UBERON:0000955!1.20e-20!50;UBERON:0006238!1.20e-20!50;UBERON:0002616!5.95e-20!49;UBERON:0002020!3.01e-19!34;UBERON:0000033!3.68e-18!63;UBERON:0003080!1.22e-15!40;UBERON:0002791!1.77e-15!29;UBERON:0003528!1.77e-15!29;UBERON:0001893!1.77e-15!29;UBERON:0003056!6.58e-15!49;UBERON:0002780!7.95e-15!39;UBERON:0001890!7.95e-15!39;UBERON:0006240!7.95e-15!39;UBERON:0000956!1.07e-09!21;UBERON:0001869!1.07e-09!21;UBERON:0000203!1.07e-09!21;UBERON:0007811!3.33e-09!86;UBERON:0002021!4.69e-09!10;UBERON:0000411!4.69e-09!10;UBERON:0001950!4.69e-09!10;UBERON:0002619!6.15e-08!17;UBERON:0002420!2.42e-07!8;UBERON:0007245!2.42e-07!8;UBERON:0010009!2.42e-07!8;UBERON:0010011!2.42e-07!8;UBERON:0000454!2.42e-07!8;UBERON:0003076!2.63e-07!12;UBERON:0003057!2.63e-07!12;UBERON:0000153!3.80e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.87e-33,73;UBERON:0000073,2.06e-32,54;UBERON:0001016,8.82e-32,75;UBERON:0001049,1.22e-29,52;UBERON:0005068,1.22e-29,52;UBERON:0006241,1.22e-29,52;UBERON:0007135,1.22e-29,52;UBERON:0002020,9.30e-26,34;UBERON:0002346,7.27e-24,64;UBERON:0003075,7.27e-24,64;UBERON:0007284,7.27e-24,64;UBERON:0000955,6.69e-23,47;UBERON:0006238,6.69e-23,47;UBERON:0004121,9.64e-23,95;UBERON:0000924,9.64e-23,95;UBERON:0006601,9.64e-23,95;UBERON:0002616,9.27e-22,46;UBERON:0010371,9.53e-20,73;UBERON:0003528,3.75e-19,29;UBERON:0002791,3.75e-19,29;UBERON:0001893,3.75e-19,29;UBERON:0003080,1.54e-17,40;UBERON:0002780,3.06e-16,39;UBERON:0001890,3.06e-16,39;UBERON:0006240,3.06e-16,39;UBERON:0002021,8.23e-16,10;UBERON:0000411,8.23e-16,10;UBERON:0001950,8.23e-16,10;UBERON:0010314,1.02e-14,92;UBERON:0003076,1.45e-13,12;UBERON:0003057,1.45e-13,12;UBERON:0003056,3.98e-13,49;UBERON:0002420,1.46e-12,8;UBERON:0007245,1.46e-12,8;UBERON:0010009,1.46e-12,8;UBERON:0010011,1.46e-12,8;UBERON:0000454,1.46e-12,8;UBERON:0002619,2.72e-10,17;UBERON:0002240,4.55e-10,6;UBERON:0005174,4.55e-10,6;UBERON:0001137,4.55e-10,6;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0000025,1.34e-08,114;UBERON:0001948,2.33e-08,5;UBERON:0002315,2.33e-08,5;UBERON:0000369,3.48e-08,5;UBERON:0002435,3.48e-08,5;UBERON:0000204,3.48e-08,5;UBERON:0010082,3.48e-08,5;UBERON:0002950,1.36e-07,4;UBERON:0001891,1.36e-07,4;UBERON:0009616,1.36e-07,4;UBERON:0010286,1.36e-07,4;UBERON:0004111,1.74e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.841299845405528,1.71390590642282,1.54607978666129,0.489963196859816,0.958454710182364,0,4.40463523997555,2.55374676170375,4.14737639791857,1.05509030184155,2.37867873366265,3.64639359389732,1.67509799400829,6.19038871034848,3.36156145108982,3.24091444021034,5.97961059356232,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,1.17588707135705,0,0,0,0,0,0,0,0,4.68449275218475,3.77004072264219,0,0,0,0,4.49371918214468,3.20250421973039,3.39266750704734,3.65031072403781,3.3243009452943,3.32460871295296,5.51620294430376,0,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.514523061896422,0,0,0,0.232236671860439,0.515469845288373,0.80673409849337,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,4.97706828962155,6.56385444916338,0,0,0.94652465824877,0.780877488593277,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,2.04579100537918,1.18586333383957,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,1.84130094602871,2.29158205375759,3.26521046453006,2.74033007908257,3.0215755895588,6.75022500231806,2.70192721934532,3.62513927187364,2.07104124700728,0.207574695168353,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0,2.44471400581777,1.23621034343337,0.320919209591815,0.505394423527595,1.2673964994512,0.377252682772152,0.842773567228942,1.08842759088278,0.689225627467359,1.90517476513229,1.15884325944855,1.15745532278223,0.412085900803307,1.17759136107518,0.685738504770831,1.4198064492747,0.715308569841963,1.45346416632329,1.41164070622996,0.592302255241736,0,0.526139422875686,1.08643291076689,0,0.949080144993393,0.492522411877817,0.409231043169689,0.77468420592983,0.578719832943424,1.24905288968973,0.935726433781634,0.644613162144895,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.841299845405528,1.71390590642282,1.54607978666129,0.489963196859816,0.958454710182364,0,4.40463523997555,2.55374676170375,4.14737639791857,1.05509030184155,2.37867873366265,3.64639359389732,1.67509799400829,6.19038871034848,3.36156145108982,3.24091444021034,5.97961059356232,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,1.17588707135705,0,0,0,0,0,0,0,0,4.68449275218475,3.77004072264219,0,0,0,0,4.49371918214468,3.20250421973039,3.39266750704734,3.65031072403781,3.3243009452943,3.32460871295296,5.51620294430376,0,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.514523061896422,0,0,0,0.232236671860439,0.515469845288373,0.80673409849337,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,4.97706828962155,6.56385444916338,0,0,0.94652465824877,0.780877488593277,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,2.04579100537918,1.18586333383957,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,1.84130094602871,2.29158205375759,3.26521046453006,2.74033007908257,3.0215755895588,6.75022500231806,2.70192721934532,3.62513927187364,2.07104124700728,0.207574695168353,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0,2.44471400581777,1.23621034343337,0.320919209591815,0.505394423527595,1.2673964994512,0.377252682772152,0.842773567228942,1.08842759088278,0.689225627467359,1.90517476513229,1.15884325944855,1.15745532278223,0.412085900803307,1.17759136107518,0.685738504770831,1.4198064492747,0.715308569841963,1.45346416632329,1.41164070622996,0.592302255241736,0,0.526139422875686,1.08643291076689,0,0.949080144993393,0.492522411877817,0.409231043169689,0.77468420592983,0.578719832943424,1.24905288968973,0.935726433781634,0.644613162144895,0.191288332068843,0,0.463735671240843 | ||
|short_description=p8@Rapgef6 | |short_description=p8@Rapgef6 | ||
}} | }} |
Latest revision as of 17:04, 1 October 2015
Short description: | p8@Rapgef6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Rapgef6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -17bp_to_ENSMUST00000149372, NM_001252497, NM_001252498, uc007iya.1, uc007iyb.1_5end |
EntrezGene: | Rapgef6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.50e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.50e-15 | 23 |
neuron | 2.53e-13 | 33 |
neuronal stem cell | 2.53e-13 | 33 |
neuroblast | 2.53e-13 | 33 |
electrically signaling cell | 2.53e-13 | 33 |
electrically responsive cell | 1.65e-10 | 39 |
electrically active cell | 1.65e-10 | 39 |
neural cell | 4.39e-09 | 43 |
ectodermal cell | 9.05e-09 | 44 |
neurectodermal cell | 9.05e-09 | 44 |