FFCP PHASE1:Mm9::chr13:55577550..55577573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:55577550..55577573,- | |||
|description=CAGE_peak_at_chr13:55577550..55577573,- | |description=CAGE_peak_at_chr13:55577550..55577573,- | ||
|id=chr13:55577550..55577573,- | |id=chr13:55577550..55577573,- | ||
|ontology_enrichment_celltype=CL:0000221!7.08e-18!44;CL:0000133!7.08e-18!44;CL:0002319!9.76e-18!43;CL:0000055!1.43e-17!50;CL:0000393!1.81e-14!39;CL:0000211!1.81e-14!39;CL:0000540!6.91e-14!33;CL:0000047!6.91e-14!33;CL:0000031!6.91e-14!33;CL:0000404!6.91e-14!33;CL:0000117!1.03e-13!23;CL:0000337!1.03e-13!23;CL:0002321!8.45e-08!70;CL:0000220!8.45e-08!70 | |ontology_enrichment_celltype=CL:0000221!7.08e-18!44;CL:0000133!7.08e-18!44;CL:0002319!9.76e-18!43;CL:0000055!1.43e-17!50;CL:0000393!1.81e-14!39;CL:0000211!1.81e-14!39;CL:0000540!6.91e-14!33;CL:0000047!6.91e-14!33;CL:0000031!6.91e-14!33;CL:0000404!6.91e-14!33;CL:0000117!1.03e-13!23;CL:0000337!1.03e-13!23;CL:0002321!8.45e-08!70;CL:0000220!8.45e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-31,23;CL:0000337,2.59e-31,23;CL:0002319,7.11e-26,43;CL:0000221,3.97e-25,44;CL:0000133,3.97e-25,44;CL:0000540,1.72e-22,33;CL:0000047,1.72e-22,33;CL:0000031,1.72e-22,33;CL:0000404,1.72e-22,33;CL:0000393,3.08e-20,39;CL:0000211,3.08e-20,39;CL:0002321,1.29e-14,70;CL:0002609,2.05e-12,6;CL:0000723,1.32e-09,91;CL:0000048,1.32e-09,91;CL:0000034,1.34e-08,97;CL:0000120,2.69e-07,3;CL:0002613,2.96e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000073!2.70e-27!75;UBERON:0001016!2.70e-27!75;UBERON:0004121!2.36e-21!102;UBERON:0000924!2.36e-21!102;UBERON:0006601!2.36e-21!102;UBERON:0001049!2.48e-19!52;UBERON:0005068!2.48e-19!52;UBERON:0006241!2.48e-19!52;UBERON:0007135!2.48e-19!52;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0002020!1.45e-18!34;UBERON:0000955!2.79e-18!50;UBERON:0006238!2.79e-18!50;UBERON:0002616!8.81e-18!49;UBERON:0000033!4.30e-16!63;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0002780!7.94e-15!39;UBERON:0001890!7.94e-15!39;UBERON:0006240!7.94e-15!39;UBERON:0003080!8.00e-15!40;UBERON:0003056!1.86e-14!49;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!2.06e-10!17;UBERON:0000153!7.19e-08!94;UBERON:0007811!3.84e-07!86;UBERON:0002021!4.31e-07!10;UBERON:0000411!4.31e-07!10;UBERON:0001950!4.31e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000073!2.70e-27!75;UBERON:0001016!2.70e-27!75;UBERON:0004121!2.36e-21!102;UBERON:0000924!2.36e-21!102;UBERON:0006601!2.36e-21!102;UBERON:0001049!2.48e-19!52;UBERON:0005068!2.48e-19!52;UBERON:0006241!2.48e-19!52;UBERON:0007135!2.48e-19!52;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0002020!1.45e-18!34;UBERON:0000955!2.79e-18!50;UBERON:0006238!2.79e-18!50;UBERON:0002616!8.81e-18!49;UBERON:0000033!4.30e-16!63;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0002780!7.94e-15!39;UBERON:0001890!7.94e-15!39;UBERON:0006240!7.94e-15!39;UBERON:0003080!8.00e-15!40;UBERON:0003056!1.86e-14!49;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!2.06e-10!17;UBERON:0000153!7.19e-08!94;UBERON:0007811!3.84e-07!86;UBERON:0002021!4.31e-07!10;UBERON:0000411!4.31e-07!10;UBERON:0001950!4.31e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.96e-31,34;UBERON:0001017,2.49e-29,73;UBERON:0001016,2.63e-28,75;UBERON:0000073,9.12e-26,54;UBERON:0001049,2.38e-23,52;UBERON:0005068,2.38e-23,52;UBERON:0006241,2.38e-23,52;UBERON:0007135,2.38e-23,52;UBERON:0003528,4.02e-23,29;UBERON:0002791,4.02e-23,29;UBERON:0001893,4.02e-23,29;UBERON:0004121,8.55e-22,95;UBERON:0000924,8.55e-22,95;UBERON:0006601,8.55e-22,95;UBERON:0000956,1.16e-20,21;UBERON:0001869,1.16e-20,21;UBERON:0000203,1.16e-20,21;UBERON:0002346,4.68e-19,64;UBERON:0003075,4.68e-19,64;UBERON:0007284,4.68e-19,64;UBERON:0002780,1.78e-17,39;UBERON:0001890,1.78e-17,39;UBERON:0006240,1.78e-17,39;UBERON:0002616,3.17e-17,46;UBERON:0003080,6.68e-17,40;UBERON:0000955,9.91e-17,47;UBERON:0006238,9.91e-17,47;UBERON:0002619,1.78e-16,17;UBERON:0010371,8.61e-16,73;UBERON:0002021,3.48e-14,10;UBERON:0000411,3.48e-14,10;UBERON:0001950,3.48e-14,10;UBERON:0003056,3.65e-14,49;UBERON:0010314,3.85e-12,92;UBERON:0001948,6.33e-10,5;UBERON:0002315,6.33e-10,5;UBERON:0000025,1.61e-08,114;UBERON:0002240,3.40e-08,6;UBERON:0005174,3.40e-08,6;UBERON:0001137,3.40e-08,6;UBERON:0004111,1.72e-07,122;UBERON:0003076,4.16e-07,12;UBERON:0003057,4.16e-07,12;UBERON:0011216,9.44e-07,194 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,1.56478268869608,1.74420125104357,0.439372365468944,0.972149495371417,0.839918529752175,1.43752564364972,0,0,0,2.31533492432352,0.286533439938757,0.515672092277442,2.42779753031517,4.7609188134483,2.53532561402472,1.0165335962074,0.889294796111139,0.449949858640699,2.96659908770092,0,1.79760066311043,3.45796474789399,2.59224030771194,8.37036817656482,2.52389953621658,2.28520787523043,1.98781686856452,1.34739879136449,4.2172007248024,1.83843757322004,1.10115880999389,1.14918604276669,0.921639199537461,2.1101806036831,5.85520919055422,2.6045668527838,1.67509799400829,0,0.30559649555362,1.47314292736834,2.42031857358475,1.86399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0,0,0,0,0.260240885925407,1.14951052216736,0.900310649026746,0.60281927134286,0.136072998302656,0.512454881139399,0.187403449119458,0,0.646703978798527,1.13463648100692,0.527853372491847,1.09597866213787,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.414251545071004,0,0.720248245844059,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,1.23485534855141,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.948339504765408,0.571242563048644,0,0.610953983535943,0.775809948670503,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0.568474235311454,0.814824882210129,0,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,2.02405350837447,0.876767573733936,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0.971122544619926,0.302323556964751,0,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0.532020700926821,1.07021290561242,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0.598066184175915,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,2.30162618253588,2.86447756719698,1.20297227640581,4.11049511862385,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,1.03552062350364,0.518936737920883,1.59609949360412,0.853668028770671,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.754505365544305,0.187283014939765,0.576226371643824,0.287177344778066,0,0.231768651889711,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843 | ||
|short_description=p@chr13:55577550..55577573,- | |short_description=p@chr13:55577550..55577573,- | ||
}} | }} |
Latest revision as of 04:00, 6 August 2015
Short description: | p@chr13:55577550..55577573, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:55577550..55577573, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.59e-31 | 23 |
neuroblast (sensu Vertebrata) | 2.59e-31 | 23 |
neural cell | 7.11e-26 | 43 |
ectodermal cell | 3.97e-25 | 44 |
neurectodermal cell | 3.97e-25 | 44 |
neuron | 1.72e-22 | 33 |
neuronal stem cell | 1.72e-22 | 33 |
neuroblast | 1.72e-22 | 33 |
electrically signaling cell | 1.72e-22 | 33 |
electrically responsive cell | 3.08e-20 | 39 |
electrically active cell | 3.08e-20 | 39 |
embryonic cell | 1.29e-14 | 70 |
neuron of cerebral cortex | 2.05e-12 | 6 |
somatic stem cell | 1.32e-09 | 91 |
multi fate stem cell | 1.32e-09 | 91 |
stem cell | 1.34e-08 | 97 |
granule cell | 2.69e-07 | 3 |
striatum neuron | 2.96e-07 | 3 |