FFCP PHASE1:Hg19::chr3:147131157..147131175,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:147131157..147131175,+
|short_description=p@chr3:147131157..147131175,+
|description=CAGE_peak_at_chr3:147131157..147131175,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:147131157..147131175,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr3:147131157..147131175,+ | |||
|id=chr3:147131157..147131175,+ | |||
|ontology_enrichment_celltype=CL:0002620!8.17e-10!23;CL:0000128!2.09e-08!7;CL:0000126!2.09e-08!7;CL:0000127!2.09e-08!7;CL:0002453!2.09e-08!7;CL:0000243!8.34e-08!15;CL:0000125!8.34e-08!15;CL:0000030!8.34e-08!15;CL:0000339!8.34e-08!15;CL:0000095!9.62e-07!17;CL:0000123!9.62e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000708;9.64e-18;3!CL:0002603;1.28e-17;3!CL:0000064;2.07e-17;3!CL:0000067;2.07e-17;3!CL:0005012;2.07e-17;3!CL:0002304;2.07e-17;3!CL:0002575;6.80e-13;2!CL:0002549;3.21e-12;2!CL:0002561;3.21e-12;2!CL:0002559;6.87e-11;5!CL:0000128;7.91e-08;7!CL:0000126;7.91e-08;7!CL:0000127;7.91e-08;7!CL:0000669;7.47e-07;4!CL:0000342;8.97e-07;1!CL:0002565;8.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,6.50e-18,3;CL:0000064,1.15e-17,3;CL:0000067,1.15e-17,3;CL:0005012,1.15e-17,3;CL:0002304,1.15e-17,3;CL:0002603,1.21e-17,3;CL:0002575,6.25e-13,2;CL:0002549,3.92e-12,2;CL:0002561,3.92e-12,2;CL:0002559,7.75e-11,5;CL:0000128,7.74e-08,7;CL:0000126,7.74e-08,7;CL:0000127,7.74e-08,7;CL:0002453,7.74e-08,7;CL:0000221,3.17e-07,72;CL:0000669,7.17e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.60e-19;3!UBERON:0006241;5.81e-17;3!UBERON:0003057;5.81e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.47e-34;6!UBERON:0004733;2.08e-29;12!UBERON:0002028;2.08e-29;12!UBERON:0004732;4.69e-27;13!UBERON:0006876;7.04e-24;11!UBERON:0002680;7.18e-23;9!UBERON:0001895;7.18e-23;9!UBERON:0000488;1.81e-22;4!UBERON:0003210;9.64e-18;3!UBERON:0001778;2.07e-17;3!UBERON:0001775;2.07e-17;3!UBERON:0002240;5.81e-17;3!UBERON:0005174;5.81e-17;3!UBERON:0001137;5.81e-17;3!UBERON:0002203;4.77e-15;6!UBERON:0001768;4.77e-15;6!UBERON:0002200;4.77e-15;6!UBERON:0007625;2.00e-12;11!UBERON:0005629;3.21e-12;2!UBERON:0005358;3.21e-12;2!UBERON:0005933;3.21e-12;2!UBERON:0001886;3.21e-12;2!UBERON:0005942;3.21e-12;2!UBERON:0004086;3.21e-12;2!UBERON:0005282;3.21e-12;2!UBERON:0005281;3.21e-12;2!UBERON:0005932;3.21e-12;2!UBERON:0002073;6.87e-11;5!UBERON:0005284;1.38e-10;5!UBERON:0010371;2.91e-10;31!UBERON:0001017;5.42e-10;75!UBERON:0001801;1.03e-09;14!UBERON:0001016;2.35e-09;83!UBERON:0001896;3.24e-08;3!UBERON:0005290;3.24e-08;3!UBERON:0000019;4.29e-07;19!UBERON:0000047;4.29e-07;19!UBERON:0004088;4.29e-07;19!UBERON:0010230;4.29e-07;19!UBERON:0003112;8.97e-07;1!UBERON:0011158;8.97e-07;1!UBERON:0002506;8.97e-07;1!UBERON:0003128;8.97e-07;1!UBERON:0001769;8.97e-07;1!UBERON:0001703;8.97e-07;1!UBERON:0002241;8.97e-07;1!UBERON:0000970;1.00e-06;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.75e-43,15;UBERON:0003057,2.75e-43,15;UBERON:0002037,1.40e-34,6;UBERON:0006215,1.40e-34,6;UBERON:0004733,3.28e-29,12;UBERON:0002028,3.28e-29,12;UBERON:0007277,3.28e-29,12;UBERON:0004732,7.13e-27,13;UBERON:0006876,7.08e-24,11;UBERON:0002680,6.95e-23,9;UBERON:0001895,6.95e-23,9;UBERON:0010092,6.95e-23,9;UBERON:0000488,1.42e-22,4;UBERON:0010371,6.31e-19,104;UBERON:0001017,5.92e-18,81;UBERON:0003210,6.50e-18,3;UBERON:0003075,7.43e-18,82;UBERON:0007284,7.43e-18,82;UBERON:0001778,1.15e-17,3;UBERON:0001775,1.15e-17,3;UBERON:0002240,4.42e-17,3;UBERON:0005174,4.42e-17,3;UBERON:0001137,4.42e-17,3;UBERON:0002346,7.41e-17,86;UBERON:0004121,2.39e-16,171;UBERON:0000924,2.39e-16,171;UBERON:0006601,2.39e-16,171;UBERON:0001016,8.09e-16,89;UBERON:0002203,4.05e-15,6;UBERON:0001768,4.05e-15,6;UBERON:0002200,4.05e-15,6;UBERON:0001049,6.28e-14,56;UBERON:0005068,6.28e-14,56;UBERON:0006241,6.28e-14,56;UBERON:0007135,6.28e-14,56;UBERON:0000955,8.52e-13,68;UBERON:0006238,8.52e-13,68;UBERON:0007625,1.75e-12,11;UBERON:0010314,1.94e-12,132;UBERON:0005629,3.92e-12,2;UBERON:0005358,3.92e-12,2;UBERON:0005933,3.92e-12,2;UBERON:0001886,3.92e-12,2;UBERON:0005942,3.92e-12,2;UBERON:0004086,3.92e-12,2;UBERON:0005282,3.92e-12,2;UBERON:0005281,3.92e-12,2;UBERON:0005932,3.92e-12,2;UBERON:0002073,7.75e-11,5;UBERON:0005086,7.75e-11,5;UBERON:0005284,1.61e-10,5;UBERON:0005085,2.21e-10,31;UBERON:0001801,9.26e-10,14;UBERON:0000073,1.21e-08,53;UBERON:0002616,1.21e-08,53;UBERON:0001896,5.22e-08,3;UBERON:0005290,5.22e-08,3;UBERON:0010096,5.22e-08,3;UBERON:0000119,8.75e-07,309;UBERON:0000019,9.33e-07,20;UBERON:0000047,9.33e-07,20;UBERON:0010312,9.33e-07,20;UBERON:0004088,9.33e-07,20;UBERON:0010230,9.33e-07,20;UBERON:0003072,9.33e-07,20;UBERON:0004128,9.33e-07,20;UBERON:0003071,9.33e-07,20 | |||
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| ||
|short_description=p@chr3:147131157..147131175,+ | |||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p@chr3:147131157..147131175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147131157..147131175, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 6.50e-18 | 3 |
ciliated cell | 1.15e-17 | 3 |
ciliated epithelial cell | 1.15e-17 | 3 |
multi-ciliated epithelial cell | 1.15e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.15e-17 | 3 |
astrocyte of the cerebellum | 1.21e-17 | 3 |
central nervous system pericyte | 6.25e-13 | 2 |
fibroblast of choroid plexus | 3.92e-12 | 2 |
outer root sheath cell | 3.92e-12 | 2 |
hair follicle cell | 7.75e-11 | 5 |
oligodendrocyte | 7.74e-08 | 7 |
macroglial cell | 7.74e-08 | 7 |
astrocyte | 7.74e-08 | 7 |
oligodendrocyte precursor cell | 7.74e-08 | 7 |
ectodermal cell | 3.17e-07 | 72 |
pericyte cell | 7.17e-07 | 4 |