FFCP PHASE1:Hg19::chr4:149363494..149363543,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:149363494..149363543,-
|short_description=p1@NR3C2
|description=CAGE_peak_1_at_NR3C2_5end
|association_with_transcript=0bp_to_ENST00000342437_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF8 | |UniProt=B0ZBF8 | ||
|association_with_transcript=0bp_to_ENST00000342437_5end | |||
|cluster_id=chr4:149363494..149363543,- | |||
|description=CAGE_peak_1_at_NR3C2_5end | |||
|id=chr4:149363494..149363543,- | |||
|ontology_enrichment_celltype=CL:0000791!1.46e-09!18;CL:0000789!1.46e-09!18;CL:0002420!1.46e-09!18;CL:0002419!1.46e-09!18;CL:0000790!1.46e-09!18;CL:0000625!8.50e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000625;5.12e-10;11!CL:0000084;1.40e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.59e-12,18;CL:0000789,7.59e-12,18;CL:0002420,7.59e-12,18;CL:0002419,7.59e-12,18;CL:0000790,7.59e-12,18;CL:0000625,3.44e-10,11;CL:0000084,1.34e-08,25;CL:0000827,1.34e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-11;18!UBERON:0006601;2.85e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-51!115;UBERON:0001049!2.94e-18!57;UBERON:0005068!2.94e-18!57;UBERON:0006241!2.94e-18!57;UBERON:0007135!2.94e-18!57;UBERON:0003080!1.21e-15!42;UBERON:0002780!2.47e-15!41;UBERON:0001890!2.47e-15!41;UBERON:0006240!2.47e-15!41;UBERON:0005743!2.41e-14!86;UBERON:0002616!9.13e-14!59;UBERON:0001017!1.14e-13!82;UBERON:0000955!2.66e-13!69;UBERON:0006238!2.66e-13!69;UBERON:0000073!4.01e-13!94;UBERON:0001016!4.01e-13!94;UBERON:0003075!5.14e-13!86;UBERON:0007284!5.14e-13!86;UBERON:0002346!2.95e-12!90;UBERON:0001893!7.32e-12!34;UBERON:0002020!1.57e-11!34;UBERON:0003528!1.57e-11!34;UBERON:0000025!2.32e-11!194;UBERON:0002791!2.53e-11!33;UBERON:0001869!6.56e-11!32;UBERON:0004111!8.21e-11!241;UBERON:0003056!3.21e-10!61;UBERON:0002619!4.31e-10!22;UBERON:0001950!4.18e-09!20;UBERON:0000477!8.69e-09!286;UBERON:0000956!8.16e-08!25;UBERON:0000203!8.16e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.28e-17;114!UBERON:0002780;2.06e-15;41!UBERON:0001890;2.06e-15;41!UBERON:0001893;1.05e-13;34!UBERON:0001869;1.81e-13;32!UBERON:0003528;1.92e-13;34!UBERON:0002020;1.92e-13;34!UBERON:0002791;2.51e-13;32!UBERON:0000073;4.68e-13;53!UBERON:0002616;4.68e-13;53!UBERON:0002619;5.74e-13;22!UBERON:0001950;1.39e-11;20!UBERON:0000956;1.17e-10;25!UBERON:0000203;1.17e-10;25!UBERON:0000955;5.44e-08;68!UBERON:0001017;6.59e-08;75!UBERON:0001016;4.00e-07;83!UBERON:0002420;8.03e-07;9!UBERON:0000125;8.03e-07;9!UBERON:0007245;8.03e-07;9!UBERON:0002308;8.03e-07;9!UBERON:0010009;8.03e-07;9!UBERON:0010011;8.03e-07;9!UBERON:0000454;8.03e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-65,114;UBERON:0001049,9.83e-25,56;UBERON:0005068,9.83e-25,56;UBERON:0006241,9.83e-25,56;UBERON:0007135,9.83e-25,56;UBERON:0000073,5.56e-23,53;UBERON:0002616,5.56e-23,53;UBERON:0002780,3.91e-21,41;UBERON:0001890,3.91e-21,41;UBERON:0003080,3.91e-21,41;UBERON:0006240,3.91e-21,41;UBERON:0003075,1.91e-17,82;UBERON:0007284,1.91e-17,82;UBERON:0000955,6.00e-17,68;UBERON:0006238,6.00e-17,68;UBERON:0001017,7.41e-17,81;UBERON:0001893,2.67e-16,34;UBERON:0003528,7.80e-16,34;UBERON:0002020,7.80e-16,34;UBERON:0002346,8.01e-16,86;UBERON:0001869,5.68e-15,32;UBERON:0002791,8.69e-15,32;UBERON:0001016,2.27e-14,89;UBERON:0010314,4.11e-13,132;UBERON:0002619,5.71e-13,22;UBERON:0003056,6.26e-13,61;UBERON:0001950,1.30e-11,20;UBERON:0010371,7.33e-11,104;UBERON:0000956,1.16e-10,25;UBERON:0000203,1.16e-10,25;UBERON:0011216,1.85e-10,223;UBERON:0000025,4.11e-10,192;UBERON:0004111,9.60e-10,240;UBERON:0004121,4.25e-07,171;UBERON:0000924,4.25e-07,171;UBERON:0006601,4.25e-07,171;UBERON:0002420,6.03e-07,9;UBERON:0007245,6.03e-07,9;UBERON:0010009,6.03e-07,9;UBERON:0010011,6.03e-07,9;UBERON:0000454,6.03e-07,9;UBERON:0000125,7.24e-07,9;UBERON:0002308,7.24e-07,9 | |||
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| ||
|short_description=p1@NR3C2 | |||
}} | }} |
Latest revision as of 00:46, 16 September 2015
Short description: | p1@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342437_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.59e-12 | 18 |
alpha-beta T cell | 7.59e-12 | 18 |
immature T cell | 7.59e-12 | 18 |
mature T cell | 7.59e-12 | 18 |
immature alpha-beta T cell | 7.59e-12 | 18 |
CD8-positive, alpha-beta T cell | 3.44e-10 | 11 |
T cell | 1.34e-08 | 25 |
pro-T cell | 1.34e-08 | 25 |