FFCP PHASE1:Hg19::chr5:19988371..19988380,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:19988371..19988380,-
|short_description=p9@CDH18
|description=CAGE_peak_9_at_CDH18_5end
|association_with_transcript=-18bp_to_NM_001167667,NM_004934_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHG6,Q13634 | |UniProt=B4DHG6,Q13634 | ||
|association_with_transcript=-18bp_to_NM_001167667,NM_004934_5end | |||
|cluster_id=chr5:19988371..19988380,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_CDH18_5end | |||
|id=chr5:19988371..19988380,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.31e-13;3!UBERON:0006601;1.65e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p9@CDH18 | |||
}} | }} |
Latest revision as of 12:46, 17 September 2015
Short description: | p9@CDH18 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CDH18_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -18bp_to_NM_001167667, NM_004934_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | B4DHG6Q13634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data