FFCP PHASE1:Hg19::chr5:87438363..87438394,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:87438363..87438394,+
|short_description=p@chr5:87438363..87438394,+
|description=CAGE_peak_at_chr5:87438363..87438394,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:87438363..87438394,+ | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_at_chr5:87438363..87438394,+ | |||
|id=chr5:87438363..87438394,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.60e-18!7;CL:0000126!2.60e-18!7;CL:0000127!2.60e-18!7;CL:0002453!2.60e-18!7;CL:0002319!1.88e-14!25;CL:0000047!6.33e-12!8;CL:0002605!1.19e-11!3;CL:0002603!1.47e-11!3;CL:0000243!3.88e-07!15;CL:0000125!3.88e-07!15;CL:0000030!3.88e-07!15;CL:0000339!3.88e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.61e-16;25!CL:0000540;4.93e-15;6!CL:0000404;4.93e-15;6!CL:0002605;2.06e-13;3!CL:0000128;1.36e-12;7!CL:0000126;1.36e-12;7!CL:0000127;1.36e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-19,8;CL:0002319,1.97e-16,25;CL:0000540,5.83e-15,6;CL:0000031,5.83e-15,6;CL:0000404,5.83e-15,6;CL:0002605,3.01e-13,3;CL:0000128,1.73e-12,7;CL:0000126,1.73e-12,7;CL:0000127,1.73e-12,7;CL:0002453,1.73e-12,7;CL:0000133,7.01e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.16e-30;3!CL:0000031;4.93e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:87438363..87438394,+ | |||
}} | }} |
Latest revision as of 17:03, 30 July 2015
Short description: | p@chr5:87438363..87438394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:87438363..87438394, + |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-19 | 8 |
neural cell | 1.97e-16 | 25 |
neuron | 5.83e-15 | 6 |
neuroblast | 5.83e-15 | 6 |
electrically signaling cell | 5.83e-15 | 6 |
astrocyte of the cerebral cortex | 3.01e-13 | 3 |
oligodendrocyte | 1.73e-12 | 7 |
macroglial cell | 1.73e-12 | 7 |
astrocyte | 1.73e-12 | 7 |
oligodendrocyte precursor cell | 1.73e-12 | 7 |
neurectodermal cell | 7.01e-07 | 59 |