FFCP PHASE1:Hg19::chr19:38720294..38720348,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8193 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20225 | |||
|TSSclassifier=strong | |||
|UniProt=Q92782,F8WEC4,Q6PJ73 | |||
|association_with_transcript=0bp_to_ENST00000412732,ENST00000418517,ENST00000434076,ENST00000456296,ENST00000475938,NM_001135156,uc002ohn.2,uc010xtu.1,uc010xtv.1,uc010xtw.1_5end | |||
|cluster_id=chr19:38720294..38720348,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_DPF1_5end | |||
|id=chr19:38720294..38720348,- | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-16!180;CL:0000133!4.36e-11!59;CL:0000333!2.65e-08!41;CL:0002319!4.95e-08!25;CL:0000221!6.29e-08!71;CL:0002321!1.78e-07!248;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60;CL:0000220!5.17e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.46e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.16e-09,25;CL:0000133,4.90e-09,59;CL:0000333,4.00e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.34e-32!94;UBERON:0001016!3.34e-32!94;UBERON:0001017!3.37e-32!82;UBERON:0005743!1.91e-31!86;UBERON:0000955!5.15e-26!69;UBERON:0006238!5.15e-26!69;UBERON:0004121!1.19e-25!169;UBERON:0000924!9.17e-25!173;UBERON:0006601!9.17e-25!173;UBERON:0001049!2.26e-24!57;UBERON:0005068!2.26e-24!57;UBERON:0006241!2.26e-24!57;UBERON:0007135!2.26e-24!57;UBERON:0003075!4.14e-24!86;UBERON:0007284!4.14e-24!86;UBERON:0002616!5.12e-23!59;UBERON:0002346!1.21e-22!90;UBERON:0001893!8.50e-22!34;UBERON:0002020!1.03e-21!34;UBERON:0003528!1.03e-21!34;UBERON:0001869!3.35e-21!32;UBERON:0000033!3.36e-21!123;UBERON:0002791!4.33e-21!33;UBERON:0000153!1.85e-19!129;UBERON:0007811!1.85e-19!129;UBERON:0002780!1.99e-19!41;UBERON:0001890!1.99e-19!41;UBERON:0006240!1.99e-19!41;UBERON:0000119!1.47e-18!312;UBERON:0003080!2.01e-18!42;UBERON:0003056!7.21e-18!61;UBERON:0000483!7.97e-18!309;UBERON:0000956!9.56e-17!25;UBERON:0000203!9.56e-17!25;UBERON:0000475!1.89e-15!365;UBERON:0002619!6.22e-15!22;UBERON:0000025!9.21e-14!194;UBERON:0001950!1.00e-13!20;UBERON:0000481!4.50e-11!347;UBERON:0004111!6.14e-11!241;UBERON:0000477!1.35e-10!286;UBERON:0000064!9.49e-08!219;UBERON:0000914!3.23e-07!83;UBERON:0002329!3.23e-07!83;UBERON:0003077!3.23e-07!83;UBERON:0003059!3.23e-07!83;UBERON:0007282!3.23e-07!83;UBERON:0009618!3.23e-07!83;UBERON:0007285!3.23e-07!83;UBERON:0003076!3.77e-07!15;UBERON:0003057!3.77e-07!15;UBERON:0002420!8.49e-07!9;UBERON:0007245!8.49e-07!9;UBERON:0010009!8.49e-07!9;UBERON:0010011!8.49e-07!9;UBERON:0000454!8.49e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.90e-27;32!UBERON:0001893;3.30e-27;34!UBERON:0002791;5.14e-27;32!UBERON:0003528;6.64e-27;34!UBERON:0002020;6.64e-27;34!UBERON:0000956;6.32e-24;25!UBERON:0000203;6.32e-24;25!UBERON:0002619;2.54e-21;22!UBERON:0002780;1.22e-20;41!UBERON:0001890;1.22e-20;41!UBERON:0001950;1.45e-19;20!UBERON:0000073;2.75e-19;53!UBERON:0002616;2.75e-19;53!UBERON:0000955;1.57e-15;68!UBERON:0001016;2.00e-15;83!UBERON:0001017;2.55e-15;75!UBERON:0002420;4.33e-09;9!UBERON:0007245;4.33e-09;9!UBERON:0010009;4.33e-09;9!UBERON:0010011;4.33e-09;9!UBERON:0000454;4.33e-09;9!UBERON:0000125;1.40e-08;9!UBERON:0002308;1.40e-08;9!UBERON:0009663;2.49e-07;7!UBERON:0000200;2.54e-07;6!UBERON:0004732;3.35e-07;13!UBERON:0002680;4.46e-07;9!UBERON:0001895;4.46e-07;9!UBERON:0011216;4.79e-07;132!UBERON:0004733;6.49e-07;12!UBERON:0002028;6.49e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.96e-43,89;UBERON:0001017,1.17e-42,81;UBERON:0001049,3.05e-36,56;UBERON:0005068,3.05e-36,56;UBERON:0006241,3.05e-36,56;UBERON:0007135,3.05e-36,56;UBERON:0000955,1.47e-35,68;UBERON:0006238,1.47e-35,68;UBERON:0000073,2.14e-34,53;UBERON:0002616,2.14e-34,53;UBERON:0001893,4.04e-31,34;UBERON:0003528,5.32e-31,34;UBERON:0002020,5.32e-31,34;UBERON:0001869,2.86e-30,32;UBERON:0002791,1.00e-29,32;UBERON:0003075,4.15e-29,82;UBERON:0007284,4.15e-29,82;UBERON:0002780,1.46e-28,41;UBERON:0001890,1.46e-28,41;UBERON:0003080,1.46e-28,41;UBERON:0006240,1.46e-28,41;UBERON:0002346,1.49e-27,86;UBERON:0004121,1.77e-24,171;UBERON:0000924,1.77e-24,171;UBERON:0006601,1.77e-24,171;UBERON:0010314,3.22e-24,132;UBERON:0000956,7.35e-24,25;UBERON:0000203,7.35e-24,25;UBERON:0010371,3.44e-23,104;UBERON:0003056,2.56e-22,61;UBERON:0002619,2.97e-21,22;UBERON:0001950,1.60e-19,20;UBERON:0011216,7.32e-15,223;UBERON:0000025,1.35e-12,192;UBERON:0000119,8.40e-12,309;UBERON:0000483,2.72e-11,306;UBERON:0002420,4.49e-09,9;UBERON:0007245,4.49e-09,9;UBERON:0010009,4.49e-09,9;UBERON:0010011,4.49e-09,9;UBERON:0000454,4.49e-09,9;UBERON:0003076,8.30e-09,15;UBERON:0003057,8.30e-09,15;UBERON:0000125,1.53e-08,9;UBERON:0002308,1.53e-08,9;UBERON:0004111,4.11e-08,240;UBERON:0004732,2.19e-07,13;UBERON:0000200,2.52e-07,6;UBERON:0009663,2.59e-07,7;UBERON:0002680,3.41e-07,9;UBERON:0001895,3.41e-07,9;UBERON:0010092,3.41e-07,9;UBERON:0004733,4.11e-07,12;UBERON:0002028,4.11e-07,12;UBERON:0007277,4.11e-07,12;UBERON:0000922,6.11e-07,592 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,2.7030733015166,2.79120467188971,0,0,0.247532705920093,0,0,0,0,0.975865597581014,6.40229501999297,4.69201589861782,1.25381888591235,7.44213566540748,10.2655818804663,10.9222096447478,0.0764134057479513,0.164201178899891,0,0,0,0.77408061658038,1.83884244895785,0.6024118375565,0,1.39440961044543,3.55423081218554,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,0,0,2.3858578411533,0.486634870302636,0.567208902984407,0.665188192387692,0.87834785693126,3.20898734969396,0,0,0,0,0,0,0,0,0.993812036833525,2.58070378531837,1.38856200643038,0.56530794192401,0.419499436209906,1.37559020970034,2.08994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0.563057402416611,3.06633274931766,0,1.09921046358244,0,0,0,0.496971951695318,2.02608818663328,0.264818361626438,0,1.77334191099179,1.12135520028461,3.20246987189115,1.2333377420858,0.311211035399766,0.538842688278752,0.980771418680752,0.454072282934794,0.576175924479999,1.87457145467037,0.312160076830321,2.85235910772225,0.298897361103602,3.05329696473789,3.88495066483516,3.93262258766296,0.61246251376468,3.80786383666481,0.309977343527296,1.18800285728205,0,1.82032272387605,0,3.36672227908132,2.37725187756732,1.6623846929051,2.19488810440419,1.83892677479412,0.751190294532984,1.47461838108027,1.07633781413317,0,0.635795703478686,1.80054657650641,0.618315175430633,0.257640540045629,0.18611685633159,2.02531598689519,0.779496041289589,0.504867548488229,0.276149695926898,0.484938170456436,0.710019185033229,1.5112814734146,2.20428770003634,0.193260853163297,0.545492241181669,0.286804595389004,3.53723747775827,5.16866096453793,3.36962434321603,2.38420426535352,4.28945446488568,2.55484151353081,1.56449532329816,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0.220587945464788,0.217879444092406,0,0,0.392442930250692,0,0,4.20725321410337,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0.548751427043128,0,1.20634766893957,0,1.95484983186195,4.15973914111831,0,0.811512834825538,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.447792613514241,0,1.91691339582606,0,0.088048434013226,0,0,0,2.22242630022592,0.763976851116555,0,8.55362230113526,0.925447434329912,0.600686115687835,0,2.69114602428866,0.43596006883328,4.03360572015225,0,3.57656445851882,1.690605505112,0.531876233169741,0,4.62973273671856,9.92943924162948,6.92697665441858,0,0,2.46972101034231,1.62868092146868,0.710783897485092,5.543663110534,0,0,0,0,0,0,0.958499421966331,0,0,1.73737568001095,1.02738161275192,1.43248770591916,0,0,0,0.256686072559497,8.38512259934129,39.0419561572865,39.4377294516625,51.9300422536481,37.0004475958835,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0.585707074963566,0,0,4.1389228517002,4.64957918974806,3.31864503375066,0.60818530127658,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,2.62156479464514,2.13074070375753,1.39616165223476,1.55776328755086,1.39452454151951,0.241718899183244,0,0,2.06666006696292,2.00300284807389,0.393373244878272,0.451199612907412,0,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,4.62681758070868,2.43851793789468,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0.769350375349168,0.656029291399411,0,0,6.22672360764735,7.34334549293233,0,0.650060246036521,1.6068392984416,0,1.23238893691716,1.07452572308291,1.51620229732984,0.322260734604821,1.16013355131383,1.70453254832202,0.801288320820636,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0.62962469366128,2.7881490806424,1.23213432070436,1.59691809095107,3.47973196830029,0.37064843820784,0.429374660225974,1.116475108079,1.58189712359363,0.38126038784765,3.83846686967001,0,0.95460974377781,1.56989728039846,0.719489830333259,2.47083326762449,1.7671860351853,2.22400729730648,3.17020642346017,0.421258456238981,3.90106991271672,0.974853958525138,1.05650146756755,0.818999468447914,0.989838023675989,2.26016233240486,5.51365343546124,1.99031692572366,0.876901770507525,0,0,1.42037263873893,2.16876448669825,4.50712964051586,1.72093622644862,0.687743287091848,0.7133421029625,1.06428319221179,0.211107635297664,0,9.10735617037716,4.19921664293979,0.384888450902048,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,1.38871292465715,3.84991942105343,1.47024129588619,4.27347302789153,0.865615277858669,0,3.34795172730527,0,0,0.846694330895531,0.649243880549111,0,0,0,0,0.677167111206413,0,0,0,1.37402137902306,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,4.490339304732,0.557216921387392,2.27308917445131,0,1.48482340416319,0,15.906362364260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| |||
|short_description=p1@DPF1 | |||
}} |
Latest revision as of 18:52, 17 September 2015
Short description: | p1@DPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPF1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000412732, ENST00000418517, ENST00000434076, ENST00000456296, ENST00000475938, NM_001135156, uc002ohn.2, uc010xtu.1, uc010xtv.1, uc010xtw.1_5end |
EntrezGene: | DPF1 |
HGNC: | 20225 |
UniProt: | Q92782F8WEC4Q6PJ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.16e-09 | 25 |
neurectodermal cell | 4.90e-09 | 59 |
migratory neural crest cell | 4.00e-08 | 41 |