FFCP PHASE1:Hg19::chr1:40839454..40839468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WU79 | |||
|association_with_transcript=76bp_to_NM_022733_5end | |||
|cluster_id=chr1:40839454..40839468,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SMAP2_5end | |||
|id=chr1:40839454..40839468,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.07e-49!140;CL:0000037!9.43e-46!172;CL:0000566!9.43e-46!172;CL:0002032!1.66e-43!165;CL:0000837!1.66e-43!165;CL:0000988!6.16e-43!182;CL:0002087!3.18e-40!119;CL:0002031!1.18e-39!124;CL:0000766!3.93e-30!76;CL:0000763!1.08e-28!112;CL:0000049!1.08e-28!112;CL:0000557!8.95e-27!71;CL:0002009!1.61e-26!65;CL:0002194!2.30e-25!63;CL:0000576!2.30e-25!63;CL:0000040!2.30e-25!63;CL:0000559!2.30e-25!63;CL:0000839!8.96e-25!70;CL:0002057!3.23e-23!42;CL:0000860!2.37e-20!45;CL:0000134!2.55e-15!358;CL:0002320!6.25e-15!365;CL:0000838!2.93e-13!52;CL:0000542!4.89e-13!53;CL:0000051!4.89e-13!53;CL:0000048!5.34e-12!430;CL:0000723!5.93e-11!436;CL:0000034!2.72e-10!444;CL:0000219!5.43e-09!390;CL:0000945!2.01e-07!24;CL:0000826!2.01e-07!24;CL:0002393!4.68e-07!9;CL:0002397!4.68e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.89e-21;48!CL:0000860;5.01e-20;33!CL:0002057;5.01e-20;33!CL:0000473;3.05e-19;39!CL:0000234;3.05e-19;39!CL:0000766;3.27e-17;69!CL:0002087;9.42e-15;104!CL:0000738;2.51e-13;136!CL:0000542;3.19e-09;53!CL:0000988;4.13e-09;177!CL:0000763;1.02e-08;100!CL:0000945;2.95e-08;24!CL:0000094;5.57e-08;8!CL:0000236;2.44e-07;13!CL:0000791;4.39e-07;18!CL:0000789;4.39e-07;18!CL:0002419;4.39e-07;18!CL:0000084;5.95e-07;25!CL:0000451;7.01e-07;10!CL:0000990;8.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.54e-62,136;CL:0002087,1.98e-52,115;CL:0000037,5.96e-51,168;CL:0002031,1.45e-50,120;CL:0000988,3.78e-49,177;CL:0002032,1.31e-48,161;CL:0000837,1.31e-48,161;CL:0000766,1.77e-40,72;CL:0002009,5.38e-37,61;CL:0000557,4.46e-36,67;CL:0002194,1.76e-35,59;CL:0000576,1.76e-35,59;CL:0000040,1.76e-35,59;CL:0000559,1.76e-35,59;CL:0000839,8.16e-33,66;CL:0000473,6.45e-32,48;CL:0000234,6.45e-32,48;CL:0000763,2.19e-31,108;CL:0000049,2.19e-31,108;CL:0000860,3.02e-29,42;CL:0002057,3.02e-29,42;CL:0000838,1.14e-15,52;CL:0000542,4.63e-15,53;CL:0000051,4.63e-15,53;CL:0000134,5.01e-10,354;CL:0002320,1.49e-09,361;CL:0002393,1.38e-08,9;CL:0002397,1.38e-08,9;CL:0000945,2.48e-08,24;CL:0000826,2.48e-08,24;CL:0000094,5.50e-08,8;CL:0000236,1.03e-07,14;CL:0000791,3.48e-07,18;CL:0000789,3.48e-07,18;CL:0002420,3.48e-07,18;CL:0002419,3.48e-07,18;CL:0000790,3.48e-07,18;CL:0000084,4.57e-07,25;CL:0000827,4.57e-07,25;CL:0000451,5.48e-07,10;CL:0000990,8.19e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-21;42!CL:0000049;3.07e-09;108!CL:0000051;3.19e-09;53!CL:0000790;4.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-36!102;UBERON:0003061!2.25e-36!102;UBERON:0002193!2.58e-32!112;UBERON:0002371!5.31e-25!80;UBERON:0001474!9.35e-24!86;UBERON:0007023!3.17e-23!115;UBERON:0002405!6.80e-20!115;UBERON:0004765!1.34e-19!101;UBERON:0001434!1.34e-19!101;UBERON:0002204!2.02e-14!167;UBERON:0002384!1.08e-13!375;UBERON:0003081!1.54e-11!216;UBERON:0000178!2.04e-10!15;UBERON:0000179!2.04e-10!15;UBERON:0000463!2.04e-10!15;UBERON:0003080!8.14e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.61e-13;15!UBERON:0000179;6.61e-13;15!UBERON:0000463;6.61e-13;15!UBERON:0002390;9.96e-11;32!UBERON:0007023;5.53e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-48,98;UBERON:0003061,5.21e-48,98;UBERON:0002193,7.85e-43,108;UBERON:0002371,7.02e-34,76;UBERON:0002405,1.78e-31,93;UBERON:0001474,4.96e-30,82;UBERON:0004765,3.09e-26,90;UBERON:0007023,1.16e-23,114;UBERON:0001434,3.05e-22,100;UBERON:0003081,2.47e-18,203;UBERON:0000178,7.11e-13,15;UBERON:0000179,7.11e-13,15;UBERON:0000463,7.11e-13,15;UBERON:0002204,1.68e-11,167;UBERON:0002384,1.39e-08,371;UBERON:0002780,1.23e-07,41;UBERON:0001890,1.23e-07,41;UBERON:0003080,1.23e-07,41;UBERON:0006240,1.23e-07,41;UBERON:0001049,1.29e-07,56;UBERON:0005068,1.29e-07,56;UBERON:0006241,1.29e-07,56;UBERON:0007135,1.29e-07,56;UBERON:0001893,2.20e-07,34;UBERON:0000073,3.05e-07,53;UBERON:0002616,3.05e-07,53;UBERON:0003528,4.92e-07,34;UBERON:0002020,4.92e-07,34;UBERON:0002791,9.59e-07,32 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.89515962028049,0.522371256399677,1.22866968250754,0,0,0,1.60896258848061,1.32558950291166,0,0,0.730310090387373,1.46379839637152,0,0,0,0,0.136874425072884,0,1.83392173795083,2.70931945184821,1.73163718890094,15.3412067971073,6.90892916574983,23.3772346207275,0,0,0,1.00707360754392,0.284338464974843,1.46800219667424,21.0518255242113,18.8511780621933,13.4546739843828,48.3657424358237,32.389366601898,44.0454220654459,6.97911546141911,6.04601509902095,5.33684934613196,9.76201955003875,2.46700732813095,4.64559556342655,37.1123186095574,29.7146419573757,23.4117407589699,17.2372840368309,10.3277549373412,9.47985406160392,8.47090527941721,4.63940455098338,5.61808711112712,14.3859429414324,16.0464513538047,15.344091019177,27.7075092156842,29.7200849856231,20.4587880255693,9.57690487474327,8.5107783703671,3.73693349397345,28.6423478392687,31.8104580236323,20.1985625575758,10.8971910474006,10.3117738076518,9.17740923578565,36.7584198182779,37.2057524938826,23.2721096514297,21.5670971801271,25.5300717830561,25.3946426981387,34.7715547364323,40.3800854714153,21.3717059904622,15.839662001519,14.7457425040775,12.4531295540898,16.6424786800938,23.2229672480887,16.0930683187255,17.1871666924064,10.494591299889,26.1837965790346,33.4725197941435,35.9336834437715,1.32171328579026,10.6496626966492,0.263384084775077,7.27826149421182,7.46720449223413,10.2800749499755,4.01247588937627,10.4295125322749,16.0972253949809,3.89653456815823,5.79334375802903,14.1410835587922,14.8427709371026,11.6445661418957,4.48319619039863,6.11278933531428,2.46656856905514,2.76350017785848,2.31842468588042,7.56261472126508,8.29376567078111,4.18142095219907,2.03956816855619,7.2811893784365,10.6524508099615,6.07247260846807,2.86708872891687,1.95325036156926,0,3.76437797694432,3.32765189001488,3.74792179657038,4.2619905367923,4.10563998460523,10.0803371612366,11.7673686144743,7.09639579025715,0,0.670700859703636,0.12786256184353,0.361439152384566,3.00802746381534,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,1.89919659471683,0.364295288292542,0,5.8418530857843,6.26867054277362,3.72282289452822,3.57735936458013,2.85997455390064,1.48583000531826,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0,201.624038677177,306.346408677177,0,0,1.39293562831038,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,1.1409436430889,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0.438977620880838,0.919463387397059,0.751190294532984,0.340296549480063,0.358779271377724,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,2.53510069643662,1.96565443335525,5.90789906681404,0.441463099414651,0,0,0.109750285408626,0,0,0,0,4.15973914111831,0,0.115930404975077,0.117408694235822,0,0,0.380508304469197,0,0,8.61759521305891,3.04205544681009,4.01304138179566,0,0,0,0,0,0.383382679165211,2.95597942737566,0.176096868026452,0.829312462163088,1.72943944100354,1.51490920111656,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0,0,1.0656887160644,0.142977993658148,7.05408087008876,2.46972101034231,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0,9.72990245129524,5.52482800575339,4.21667878966063,0,0,0,0.868687840005475,0.61642896765115,0.358121926479791,0.672510863961164,10.0485687702983,11.2126338926949,9.75407075726088,0,0,0,0.167516265334349,0,187.251755986796,200.438177666697,130.955302245787,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0,0,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0,0.686286847621712,19.8497305077972,20.4928490777686,15.0485856502857,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,3.39261326365842,1.77561725313127,3.03870477251094,5.19254429183621,3.7187321107187,0,0,0.0920809889358963,3.67406234126742,2.73136752010076,0.786746489756545,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0,0,4.32772248920434,0.366277859273374,0.247528499761764,0,0,0,1.16004861950546,0.462145851343933,0.460511024178389,0.551346289938122,1.28904293841928,0.145016693914229,0.852266274161009,0.356128142586949,0.165284915360978,0,0.127612712494584,0,0,1.25924938732256,0.6970372701606,0.924100740528266,3.72614221221915,0.869932992075073,0.18532421910392,1.28812398067792,0,0,0,0.255897791311334,0,0.318203247925937,2.35484592059769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| |||
|short_description=p3@SMAP2 | |||
}} |
Latest revision as of 01:15, 18 September 2015
Short description: | p3@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMAP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 76bp_to_NM_022733_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | Q8WU79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.21e-48 | 98 |
blood island | 5.21e-48 | 98 |
hemolymphoid system | 7.85e-43 | 108 |
bone marrow | 7.02e-34 | 76 |
immune system | 1.78e-31 | 93 |
bone element | 4.96e-30 | 82 |
skeletal element | 3.09e-26 | 90 |
adult organism | 1.16e-23 | 114 |
skeletal system | 3.05e-22 | 100 |
lateral plate mesoderm | 2.47e-18 | 203 |
blood | 7.11e-13 | 15 |
haemolymphatic fluid | 7.11e-13 | 15 |
organism substance | 7.11e-13 | 15 |
musculoskeletal system | 1.68e-11 | 167 |
connective tissue | 1.39e-08 | 371 |
regional part of forebrain | 1.23e-07 | 41 |
forebrain | 1.23e-07 | 41 |
anterior neural tube | 1.23e-07 | 41 |
future forebrain | 1.23e-07 | 41 |
neural tube | 1.29e-07 | 56 |
neural rod | 1.29e-07 | 56 |
future spinal cord | 1.29e-07 | 56 |
neural keel | 1.29e-07 | 56 |
telencephalon | 2.20e-07 | 34 |
regional part of nervous system | 3.05e-07 | 53 |
regional part of brain | 3.05e-07 | 53 |
brain grey matter | 4.92e-07 | 34 |
gray matter | 4.92e-07 | 34 |
regional part of telencephalon | 9.59e-07 | 32 |