FFCP PHASE1:Hg19::chr9:35161948..35161995,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:35161948..35161995,+
|short_description=p2@UNC13B
|description=CAGE_peak_2_at_UNC13B_5end
|association_with_transcript=0bp_to_NM_006377,uc003zwq.2,uc003zwr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10497 | |EntrezGene=10497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12566 | |HGNC=12566 | ||
|TSSclassifier=strong | |||
|UniProt=O14795,Q4LE73 | |UniProt=O14795,Q4LE73 | ||
|association_with_transcript=0bp_to_NM_006377,uc003zwq.2,uc003zwr.2,uc010mkl.1_5end | |||
|cluster_id=chr9:35161948..35161995,+ | |||
|description=CAGE_peak_2_at_UNC13B_5end | |||
|id=chr9:35161948..35161995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.13e-15!659;UBERON:0000922!4.67e-14!612;UBERON:0000467!3.85e-12!625;UBERON:0000477!8.04e-12!286;UBERON:0000480!8.06e-12!626;UBERON:0002050!1.15e-11!605;UBERON:0005423!1.15e-11!605;UBERON:0004111!1.42e-11!241;UBERON:0000025!1.75e-11!194;UBERON:0000923!1.86e-11!604;UBERON:0005291!1.86e-11!604;UBERON:0006598!1.86e-11!604;UBERON:0002532!1.86e-11!604;UBERON:0000119!3.36e-11!312;UBERON:0007023!6.55e-11!115;UBERON:0000481!9.47e-11!347;UBERON:0000483!1.39e-10!309;UBERON:0000475!1.48e-09!365;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0004121!3.15e-09!169;UBERON:0000062!3.17e-09!511;UBERON:0003075!3.67e-09!86;UBERON:0007284!3.67e-09!86;UBERON:0000924!3.69e-09!173;UBERON:0006601!3.69e-09!173;UBERON:0002346!5.99e-09!90;UBERON:0005743!9.84e-09!86;UBERON:0001017!1.61e-08!82;UBERON:0002616!7.52e-08!59;UBERON:0001049!1.33e-07!57;UBERON:0005068!1.33e-07!57;UBERON:0006241!1.33e-07!57;UBERON:0007135!1.33e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.92e-11,192;UBERON:0004111,4.00e-11,240;UBERON:0007023,1.63e-10,114;UBERON:0000922,1.83e-10,592;UBERON:0000119,4.90e-10,309;UBERON:0000483,1.88e-09,306;UBERON:0005423,3.15e-09,581;UBERON:0001016,3.20e-09,89;UBERON:0011216,5.76e-09,223;UBERON:0001017,1.48e-08,81;UBERON:0003075,1.88e-08,82;UBERON:0007284,1.88e-08,82;UBERON:0004121,2.03e-08,171;UBERON:0000924,2.03e-08,171;UBERON:0006601,2.03e-08,171;UBERON:0002346,2.99e-08,86;UBERON:0010314,5.16e-08,132;UBERON:0001049,1.08e-07,56;UBERON:0005068,1.08e-07,56;UBERON:0006241,1.08e-07,56;UBERON:0007135,1.08e-07,56;UBERON:0010371,1.15e-07,104;UBERON:0000923,1.76e-07,560;UBERON:0010316,1.76e-07,560;UBERON:0005291,1.76e-07,560;UBERON:0006598,1.76e-07,560;UBERON:0010317,1.76e-07,560;UBERON:0002532,1.76e-07,560;UBERON:0002050,1.83e-07,564;UBERON:0000073,8.14e-07,53;UBERON:0002616,8.14e-07,53 | |||
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| ||
|short_description=p2@UNC13B | |||
}} | }} |
Latest revision as of 06:59, 17 September 2015
Short description: | p2@UNC13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UNC13B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006377, uc003zwq.2, uc003zwr.2, uc010mkl.1_5end |
EntrezGene: | UNC13B |
HGNC: | 12566 |
UniProt: | O14795Q4LE73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.92e-11 | 192 |
anatomical conduit | 4.00e-11 | 240 |
adult organism | 1.63e-10 | 114 |
embryo | 1.83e-10 | 592 |
cell layer | 4.90e-10 | 309 |
epithelium | 1.88e-09 | 306 |
developing anatomical structure | 3.15e-09 | 581 |
nervous system | 3.20e-09 | 89 |
organ system subdivision | 5.76e-09 | 223 |
central nervous system | 1.48e-08 | 81 |
neural plate | 1.88e-08 | 82 |
presumptive neural plate | 1.88e-08 | 82 |
ectoderm-derived structure | 2.03e-08 | 171 |
ectoderm | 2.03e-08 | 171 |
presumptive ectoderm | 2.03e-08 | 171 |
neurectoderm | 2.99e-08 | 86 |
structure with developmental contribution from neural crest | 5.16e-08 | 132 |
neural tube | 1.08e-07 | 56 |
neural rod | 1.08e-07 | 56 |
future spinal cord | 1.08e-07 | 56 |
neural keel | 1.08e-07 | 56 |
ecto-epithelium | 1.15e-07 | 104 |
germ layer | 1.76e-07 | 560 |
germ layer / neural crest | 1.76e-07 | 560 |
embryonic tissue | 1.76e-07 | 560 |
presumptive structure | 1.76e-07 | 560 |
germ layer / neural crest derived structure | 1.76e-07 | 560 |
epiblast (generic) | 1.76e-07 | 560 |
embryonic structure | 1.83e-07 | 564 |
regional part of nervous system | 8.14e-07 | 53 |
regional part of brain | 8.14e-07 | 53 |