FFCP PHASE1:Mm9::chr13:100195175..100195191,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100195175..100195191,-|id=chr13:100195175..100195191,-|ontology_enrichment_celltype=CL:0000117!1.14e-15!23;CL:0000337!1.14e-15!23;CL:0000540!2.53e-11!33;CL:0000047!2.53e-11!33;CL:0000031!2.53e-11!33;CL:0000404!2.53e-11!33;CL:0000393!4.05e-09!39;CL:0000211!4.05e-09!39;CL:0002319!2.70e-08!43;CL:0000221!7.46e-08!44;CL:0000133!7.46e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-18,23;CL:0000337,2.16e-18,23;CL:0000540,3.87e-12,33;CL:0000047,3.87e-12,33;CL:0000031,3.87e-12,33;CL:0000404,3.87e-12,33;CL:0002612,1.18e-10,3;CL:0000393,6.29e-10,39;CL:0000211,6.29e-10,39;CL:0002319,8.48e-09,43;CL:0000221,1.51e-08,44;CL:0000133,1.51e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.39e-22!71;UBERON:0003075!6.39e-22!71;UBERON:0007284!6.39e-22!71;UBERON:0004121!1.25e-19!102;UBERON:0000924!1.25e-19!102;UBERON:0006601!1.25e-19!102;UBERON:0000073!3.23e-19!75;UBERON:0001016!3.23e-19!75;UBERON:0001017!1.43e-18!73;UBERON:0005743!1.43e-18!73;UBERON:0001049!7.58e-18!52;UBERON:0005068!7.58e-18!52;UBERON:0006241!7.58e-18!52;UBERON:0007135!7.58e-18!52;UBERON:0000033!1.30e-17!63;UBERON:0000955!1.88e-16!50;UBERON:0006238!1.88e-16!50;UBERON:0003056!2.38e-16!49;UBERON:0002616!1.00e-15!49;UBERON:0002020!4.98e-13!34;UBERON:0003080!9.69e-13!40;UBERON:0002780!4.23e-12!39;UBERON:0001890!4.23e-12!39;UBERON:0006240!4.23e-12!39;UBERON:0002791!7.61e-10!29;UBERON:0003528!7.61e-10!29;UBERON:0001893!7.61e-10!29;UBERON:0007811!2.40e-09!86;UBERON:0000153!2.71e-08!94;UBERON:0002420!4.81e-07!8;UBERON:0007245!4.81e-07!8;UBERON:0010009!4.81e-07!8;UBERON:0010011!4.81e-07!8;UBERON:0000454!4.81e-07!8;UBERON:0000025!7.41e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.55e-20,73;UBERON:0001016,7.11e-20,75;UBERON:0004121,1.15e-19,95;UBERON:0000924,1.15e-19,95;UBERON:0006601,1.15e-19,95;UBERON:0002346,2.34e-19,64;UBERON:0003075,2.34e-19,64;UBERON:0007284,2.34e-19,64;UBERON:0000073,5.51e-19,54;UBERON:0001049,7.64e-18,52;UBERON:0005068,7.64e-18,52;UBERON:0006241,7.64e-18,52;UBERON:0007135,7.64e-18,52;UBERON:0010371,1.80e-16,73;UBERON:0002420,7.72e-15,8;UBERON:0007245,7.72e-15,8;UBERON:0010009,7.72e-15,8;UBERON:0010011,7.72e-15,8;UBERON:0000454,7.72e-15,8;UBERON:0002020,1.71e-14,34;UBERON:0000955,1.95e-13,47;UBERON:0006238,1.95e-13,47;UBERON:0003056,2.51e-12,49;UBERON:0010314,3.17e-12,92;UBERON:0002616,7.41e-12,46;UBERON:0000369,3.03e-11,5;UBERON:0002435,3.03e-11,5;UBERON:0000204,3.03e-11,5;UBERON:0010082,3.03e-11,5;UBERON:0002257,1.18e-10,3;UBERON:0003528,4.00e-10,29;UBERON:0002791,4.00e-10,29;UBERON:0001893,4.00e-10,29;UBERON:0003076,4.93e-10,12;UBERON:0003057,4.93e-10,12;UBERON:0003080,6.37e-10,40;UBERON:0002240,2.44e-09,6;UBERON:0005174,2.44e-09,6;UBERON:0001137,2.44e-09,6;UBERON:0002780,1.40e-08,39;UBERON:0001890,1.40e-08,39;UBERON:0006240,1.40e-08,39;UBERON:0001896,2.39e-08,2;UBERON:0002298,2.39e-08,2;UBERON:0005290,2.39e-08,2;UBERON:0010096,2.39e-08,2;UBERON:0002950,7.80e-08,4;UBERON:0001891,7.80e-08,4;UBERON:0009616,7.80e-08,4;UBERON:0010286,7.80e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.630974884054146,0.571301968807607,0.883474163806454,0.489963196859816,1.53352753629178,0.919218786610021,1.10115880999389,0.766124028511126,1.53606533256243,0.659431438650969,2.10421580285542,1.04182674111352,0.558365998002762,2.25105044012672,1.22238598221448,2.65165726926301,1.42371680799103,1.4911955666024,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.19832511523858,2.28750301409313,2.89005009859588,0.869121600961382,1.53429274398198,1.24672826735736,0.973447578406546,0.305518091550949,0.248813941220186,0.505445516867349,0.631325567659422,0.780722657776222,0,0.180062129805349,1.05493372485001,1.02054748726992,0.640568601424249,0.655912071918102,1.55222022443409,0.646703978798527,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,1.68231958851302,4.21908910755066,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,3.21101179975584,2.46144541843627,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.876767573733936,0,1.60660658210904,0.141940085208269,0.178065603667255,0,0,0,0,0,0.565815239267694,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.37456602987953,0.256100609619477,0.402048282689293,0,0.115884325944855,0,0,0,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.376437521661322,0,0.73171189149109,0,0.814824683075171,0.561142271657738,0.237270036248348,0.689531376628944,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr13:100195175..100195191,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100195175..100195191,- | |||
|description=CAGE_peak_at_chr13:100195175..100195191,- | |||
|id=chr13:100195175..100195191,- | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-15!23;CL:0000337!1.14e-15!23;CL:0000540!2.53e-11!33;CL:0000047!2.53e-11!33;CL:0000031!2.53e-11!33;CL:0000404!2.53e-11!33;CL:0000393!4.05e-09!39;CL:0000211!4.05e-09!39;CL:0002319!2.70e-08!43;CL:0000221!7.46e-08!44;CL:0000133!7.46e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-18,23;CL:0000337,2.16e-18,23;CL:0000540,3.87e-12,33;CL:0000047,3.87e-12,33;CL:0000031,3.87e-12,33;CL:0000404,3.87e-12,33;CL:0002612,1.18e-10,3;CL:0000393,6.29e-10,39;CL:0000211,6.29e-10,39;CL:0002319,8.48e-09,43;CL:0000221,1.51e-08,44;CL:0000133,1.51e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.39e-22!71;UBERON:0003075!6.39e-22!71;UBERON:0007284!6.39e-22!71;UBERON:0004121!1.25e-19!102;UBERON:0000924!1.25e-19!102;UBERON:0006601!1.25e-19!102;UBERON:0000073!3.23e-19!75;UBERON:0001016!3.23e-19!75;UBERON:0001017!1.43e-18!73;UBERON:0005743!1.43e-18!73;UBERON:0001049!7.58e-18!52;UBERON:0005068!7.58e-18!52;UBERON:0006241!7.58e-18!52;UBERON:0007135!7.58e-18!52;UBERON:0000033!1.30e-17!63;UBERON:0000955!1.88e-16!50;UBERON:0006238!1.88e-16!50;UBERON:0003056!2.38e-16!49;UBERON:0002616!1.00e-15!49;UBERON:0002020!4.98e-13!34;UBERON:0003080!9.69e-13!40;UBERON:0002780!4.23e-12!39;UBERON:0001890!4.23e-12!39;UBERON:0006240!4.23e-12!39;UBERON:0002791!7.61e-10!29;UBERON:0003528!7.61e-10!29;UBERON:0001893!7.61e-10!29;UBERON:0007811!2.40e-09!86;UBERON:0000153!2.71e-08!94;UBERON:0002420!4.81e-07!8;UBERON:0007245!4.81e-07!8;UBERON:0010009!4.81e-07!8;UBERON:0010011!4.81e-07!8;UBERON:0000454!4.81e-07!8;UBERON:0000025!7.41e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.55e-20,73;UBERON:0001016,7.11e-20,75;UBERON:0004121,1.15e-19,95;UBERON:0000924,1.15e-19,95;UBERON:0006601,1.15e-19,95;UBERON:0002346,2.34e-19,64;UBERON:0003075,2.34e-19,64;UBERON:0007284,2.34e-19,64;UBERON:0000073,5.51e-19,54;UBERON:0001049,7.64e-18,52;UBERON:0005068,7.64e-18,52;UBERON:0006241,7.64e-18,52;UBERON:0007135,7.64e-18,52;UBERON:0010371,1.80e-16,73;UBERON:0002420,7.72e-15,8;UBERON:0007245,7.72e-15,8;UBERON:0010009,7.72e-15,8;UBERON:0010011,7.72e-15,8;UBERON:0000454,7.72e-15,8;UBERON:0002020,1.71e-14,34;UBERON:0000955,1.95e-13,47;UBERON:0006238,1.95e-13,47;UBERON:0003056,2.51e-12,49;UBERON:0010314,3.17e-12,92;UBERON:0002616,7.41e-12,46;UBERON:0000369,3.03e-11,5;UBERON:0002435,3.03e-11,5;UBERON:0000204,3.03e-11,5;UBERON:0010082,3.03e-11,5;UBERON:0002257,1.18e-10,3;UBERON:0003528,4.00e-10,29;UBERON:0002791,4.00e-10,29;UBERON:0001893,4.00e-10,29;UBERON:0003076,4.93e-10,12;UBERON:0003057,4.93e-10,12;UBERON:0003080,6.37e-10,40;UBERON:0002240,2.44e-09,6;UBERON:0005174,2.44e-09,6;UBERON:0001137,2.44e-09,6;UBERON:0002780,1.40e-08,39;UBERON:0001890,1.40e-08,39;UBERON:0006240,1.40e-08,39;UBERON:0001896,2.39e-08,2;UBERON:0002298,2.39e-08,2;UBERON:0005290,2.39e-08,2;UBERON:0010096,2.39e-08,2;UBERON:0002950,7.80e-08,4;UBERON:0001891,7.80e-08,4;UBERON:0009616,7.80e-08,4;UBERON:0010286,7.80e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.630974884054146,0.571301968807607,0.883474163806454,0.489963196859816,1.53352753629178,0.919218786610021,1.10115880999389,0.766124028511126,1.53606533256243,0.659431438650969,2.10421580285542,1.04182674111352,0.558365998002762,2.25105044012672,1.22238598221448,2.65165726926301,1.42371680799103,1.4911955666024,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.19832511523858,2.28750301409313,2.89005009859588,0.869121600961382,1.53429274398198,1.24672826735736,0.973447578406546,0.305518091550949,0.248813941220186,0.505445516867349,0.631325567659422,0.780722657776222,0,0.180062129805349,1.05493372485001,1.02054748726992,0.640568601424249,0.655912071918102,1.55222022443409,0.646703978798527,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,1.68231958851302,4.21908910755066,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,3.21101179975584,2.46144541843627,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.876767573733936,0,1.60660658210904,0.141940085208269,0.178065603667255,0,0,0,0,0,0.565815239267694,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.37456602987953,0.256100609619477,0.402048282689293,0,0.115884325944855,0,0,0,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.376437521661322,0,0.73171189149109,0,0.814824683075171,0.561142271657738,0.237270036248348,0.689531376628944,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr13:100195175..100195191,- | |||
}} |
Latest revision as of 12:16, 5 August 2015
Short description: | p@chr13:100195175..100195191, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100195175..100195191, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.16e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-18 | 23 |
neuron | 3.87e-12 | 33 |
neuronal stem cell | 3.87e-12 | 33 |
neuroblast | 3.87e-12 | 33 |
electrically signaling cell | 3.87e-12 | 33 |
neuron of the ventral spinal cord | 1.18e-10 | 3 |
electrically responsive cell | 6.29e-10 | 39 |
electrically active cell | 6.29e-10 | 39 |
neural cell | 8.48e-09 | 43 |
ectodermal cell | 1.51e-08 | 44 |
neurectodermal cell | 1.51e-08 | 44 |