FFCP PHASE1:Mm9::chr19:5308252..5308272,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:5308252..5308272,+|id=chr19:5308252..5308272,+|ontology_enrichment_celltype=CL:0000117!9.91e-13!23;CL:0000337!9.91e-13!23;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0000221!2.66e-08!44;CL:0000133!2.66e-08!44;CL:0002319!8.92e-08!43;CL:0000393!4.24e-07!39;CL:0000211!4.24e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.56e-22,23;CL:0000337,5.56e-22,23;CL:0000540,1.12e-14,33;CL:0000047,1.12e-14,33;CL:0000031,1.12e-14,33;CL:0000404,1.12e-14,33;CL:0000221,9.39e-14,44;CL:0000133,9.39e-14,44;CL:0002319,8.09e-13,43;CL:0000393,2.15e-11,39;CL:0000211,2.15e-11,39;CL:0002609,2.74e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.72e-24!73;UBERON:0005743!1.72e-24!73;UBERON:0000033!3.00e-24!63;UBERON:0000073!4.79e-23!75;UBERON:0001016!4.79e-23!75;UBERON:0001049!5.15e-22!52;UBERON:0005068!5.15e-22!52;UBERON:0006241!5.15e-22!52;UBERON:0007135!5.15e-22!52;UBERON:0003056!1.76e-21!49;UBERON:0000955!1.06e-20!50;UBERON:0006238!1.06e-20!50;UBERON:0002346!1.08e-20!71;UBERON:0003075!1.08e-20!71;UBERON:0007284!1.08e-20!71;UBERON:0002616!5.28e-20!49;UBERON:0002020!6.12e-20!34;UBERON:0004121!2.24e-19!102;UBERON:0000924!2.24e-19!102;UBERON:0006601!2.24e-19!102;UBERON:0003080!9.87e-18!40;UBERON:0002780!5.22e-17!39;UBERON:0001890!5.22e-17!39;UBERON:0006240!5.22e-17!39;UBERON:0002791!6.39e-17!29;UBERON:0003528!6.39e-17!29;UBERON:0001893!6.39e-17!29;UBERON:0000153!4.08e-15!94;UBERON:0007811!7.27e-14!86;UBERON:0000956!1.37e-13!21;UBERON:0001869!1.37e-13!21;UBERON:0000203!1.37e-13!21;UBERON:0002619!3.28e-11!17;UBERON:0000025!6.94e-11!114;UBERON:0004111!7.07e-10!122;UBERON:0002021!3.11e-09!10;UBERON:0000411!3.11e-09!10;UBERON:0001950!3.11e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-35,73;UBERON:0000073,2.58e-34,54;UBERON:0001016,2.62e-34,75;UBERON:0002020,4.57e-34,34;UBERON:0004121,2.88e-33,95;UBERON:0000924,2.88e-33,95;UBERON:0006601,2.88e-33,95;UBERON:0002346,5.98e-33,64;UBERON:0003075,5.98e-33,64;UBERON:0007284,5.98e-33,64;UBERON:0001049,2.16e-32,52;UBERON:0005068,2.16e-32,52;UBERON:0006241,2.16e-32,52;UBERON:0007135,2.16e-32,52;UBERON:0010314,1.16e-31,92;UBERON:0010371,2.33e-30,73;UBERON:0003528,1.09e-28,29;UBERON:0002791,1.09e-28,29;UBERON:0001893,1.09e-28,29;UBERON:0000955,2.64e-27,47;UBERON:0006238,2.64e-27,47;UBERON:0003056,1.99e-26,49;UBERON:0002616,3.79e-26,46;UBERON:0003080,8.08e-24,40;UBERON:0002780,1.28e-22,39;UBERON:0001890,1.28e-22,39;UBERON:0006240,1.28e-22,39;UBERON:0000956,4.23e-22,21;UBERON:0001869,4.23e-22,21;UBERON:0000203,4.23e-22,21;UBERON:0002619,6.94e-18,17;UBERON:0000025,2.50e-15,114;UBERON:0004111,2.90e-15,122;UBERON:0002021,3.69e-15,10;UBERON:0000411,3.69e-15,10;UBERON:0001950,3.69e-15,10;UBERON:0000483,4.91e-10,174;UBERON:0000119,9.43e-10,176;UBERON:0003076,8.05e-09,12;UBERON:0003057,8.05e-09,12;UBERON:0002420,1.15e-07,8;UBERON:0007245,1.15e-07,8;UBERON:0010009,1.15e-07,8;UBERON:0010011,1.15e-07,8;UBERON:0000454,1.15e-07,8;UBERON:0002240,2.66e-07,6;UBERON:0005174,2.66e-07,6;UBERON:0001137,2.66e-07,6;UBERON:0000369,3.38e-07,5;UBERON:0002435,3.38e-07,5;UBERON:0000204,3.38e-07,5;UBERON:0010082,3.38e-07,5|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,1.43752564364972,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,4.43681982454325,0,0,0,0,0,1.19840044207362,1.92109152660777,2.07379224616955,2.70011876663381,3.99617426567626,1.99955689082663,3.09215957332259,2.32732518508413,4.02550978276593,4.5960939330501,1.10115880999389,3.31987079021488,3.99376986466233,3.29715719325485,4.57438218012048,5.2091337055676,2.51264699101243,0,2.90316670775939,3.24091444021034,4.41352210477219,4.47358669980721,0,0,0,0,0,0,0,0,0,0,0,0,5.0703631119605,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,1.01219549843938,0,0,0,0,0,5.5628351432194,4.39838084308256,0,0,0,0,5.69204429738326,5.94750783664214,4.27224797183739,11.9938780932671,6.64860189058859,4.98691306942944,2.43361894601636,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,1.17108398666433,0.459804208866946,1.44049703844279,2.26057226753573,1.63287597963187,0.896796041993948,1.49922759295566,3.3631438196072,0.215567992932842,1.13463648100692,0.527853372491847,0.876782929710299,1.11218899690239,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0,0.710234206755631,0.590292695242212,1.69693824176116,0.930135779001631,2.14618721119695,0.583826711835847,2.13927804887525,2.62667942526552,1.94565142910054,3.94739966048397,3.95190207523891,2.28150911892632,11.565947171027,7.51203670368776,0,0,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:5308252..5308272,+ | |||
|description=CAGE_peak_at_chr19:5308252..5308272,+ | |||
|id=chr19:5308252..5308272,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.91e-13!23;CL:0000337!9.91e-13!23;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0000221!2.66e-08!44;CL:0000133!2.66e-08!44;CL:0002319!8.92e-08!43;CL:0000393!4.24e-07!39;CL:0000211!4.24e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.56e-22,23;CL:0000337,5.56e-22,23;CL:0000540,1.12e-14,33;CL:0000047,1.12e-14,33;CL:0000031,1.12e-14,33;CL:0000404,1.12e-14,33;CL:0000221,9.39e-14,44;CL:0000133,9.39e-14,44;CL:0002319,8.09e-13,43;CL:0000393,2.15e-11,39;CL:0000211,2.15e-11,39;CL:0002609,2.74e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-24!73;UBERON:0005743!1.72e-24!73;UBERON:0000033!3.00e-24!63;UBERON:0000073!4.79e-23!75;UBERON:0001016!4.79e-23!75;UBERON:0001049!5.15e-22!52;UBERON:0005068!5.15e-22!52;UBERON:0006241!5.15e-22!52;UBERON:0007135!5.15e-22!52;UBERON:0003056!1.76e-21!49;UBERON:0000955!1.06e-20!50;UBERON:0006238!1.06e-20!50;UBERON:0002346!1.08e-20!71;UBERON:0003075!1.08e-20!71;UBERON:0007284!1.08e-20!71;UBERON:0002616!5.28e-20!49;UBERON:0002020!6.12e-20!34;UBERON:0004121!2.24e-19!102;UBERON:0000924!2.24e-19!102;UBERON:0006601!2.24e-19!102;UBERON:0003080!9.87e-18!40;UBERON:0002780!5.22e-17!39;UBERON:0001890!5.22e-17!39;UBERON:0006240!5.22e-17!39;UBERON:0002791!6.39e-17!29;UBERON:0003528!6.39e-17!29;UBERON:0001893!6.39e-17!29;UBERON:0000153!4.08e-15!94;UBERON:0007811!7.27e-14!86;UBERON:0000956!1.37e-13!21;UBERON:0001869!1.37e-13!21;UBERON:0000203!1.37e-13!21;UBERON:0002619!3.28e-11!17;UBERON:0000025!6.94e-11!114;UBERON:0004111!7.07e-10!122;UBERON:0002021!3.11e-09!10;UBERON:0000411!3.11e-09!10;UBERON:0001950!3.11e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-35,73;UBERON:0000073,2.58e-34,54;UBERON:0001016,2.62e-34,75;UBERON:0002020,4.57e-34,34;UBERON:0004121,2.88e-33,95;UBERON:0000924,2.88e-33,95;UBERON:0006601,2.88e-33,95;UBERON:0002346,5.98e-33,64;UBERON:0003075,5.98e-33,64;UBERON:0007284,5.98e-33,64;UBERON:0001049,2.16e-32,52;UBERON:0005068,2.16e-32,52;UBERON:0006241,2.16e-32,52;UBERON:0007135,2.16e-32,52;UBERON:0010314,1.16e-31,92;UBERON:0010371,2.33e-30,73;UBERON:0003528,1.09e-28,29;UBERON:0002791,1.09e-28,29;UBERON:0001893,1.09e-28,29;UBERON:0000955,2.64e-27,47;UBERON:0006238,2.64e-27,47;UBERON:0003056,1.99e-26,49;UBERON:0002616,3.79e-26,46;UBERON:0003080,8.08e-24,40;UBERON:0002780,1.28e-22,39;UBERON:0001890,1.28e-22,39;UBERON:0006240,1.28e-22,39;UBERON:0000956,4.23e-22,21;UBERON:0001869,4.23e-22,21;UBERON:0000203,4.23e-22,21;UBERON:0002619,6.94e-18,17;UBERON:0000025,2.50e-15,114;UBERON:0004111,2.90e-15,122;UBERON:0002021,3.69e-15,10;UBERON:0000411,3.69e-15,10;UBERON:0001950,3.69e-15,10;UBERON:0000483,4.91e-10,174;UBERON:0000119,9.43e-10,176;UBERON:0003076,8.05e-09,12;UBERON:0003057,8.05e-09,12;UBERON:0002420,1.15e-07,8;UBERON:0007245,1.15e-07,8;UBERON:0010009,1.15e-07,8;UBERON:0010011,1.15e-07,8;UBERON:0000454,1.15e-07,8;UBERON:0002240,2.66e-07,6;UBERON:0005174,2.66e-07,6;UBERON:0001137,2.66e-07,6;UBERON:0000369,3.38e-07,5;UBERON:0002435,3.38e-07,5;UBERON:0000204,3.38e-07,5;UBERON:0010082,3.38e-07,5 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,1.43752564364972,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,4.43681982454325,0,0,0,0,0,1.19840044207362,1.92109152660777,2.07379224616955,2.70011876663381,3.99617426567626,1.99955689082663,3.09215957332259,2.32732518508413,4.02550978276593,4.5960939330501,1.10115880999389,3.31987079021488,3.99376986466233,3.29715719325485,4.57438218012048,5.2091337055676,2.51264699101243,0,2.90316670775939,3.24091444021034,4.41352210477219,4.47358669980721,0,0,0,0,0,0,0,0,0,0,0,0,5.0703631119605,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,1.01219549843938,0,0,0,0,0,5.5628351432194,4.39838084308256,0,0,0,0,5.69204429738326,5.94750783664214,4.27224797183739,11.9938780932671,6.64860189058859,4.98691306942944,2.43361894601636,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,1.17108398666433,0.459804208866946,1.44049703844279,2.26057226753573,1.63287597963187,0.896796041993948,1.49922759295566,3.3631438196072,0.215567992932842,1.13463648100692,0.527853372491847,0.876782929710299,1.11218899690239,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0,0.710234206755631,0.590292695242212,1.69693824176116,0.930135779001631,2.14618721119695,0.583826711835847,2.13927804887525,2.62667942526552,1.94565142910054,3.94739966048397,3.95190207523891,2.28150911892632,11.565947171027,7.51203670368776,0,0,1.06644125267617,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.913988100877831,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.938760993154008,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,1.44495530989013,2.22702204525186,0,0,0,0,0.646270193198397,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0,4.4984984299053,0,1.24645922567079,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.214337035031592,0.177340233642274,0.535106452806212,0.987294123612726,0,0,0,0,0,0.161464426695906,0,0,0,0,2.78137953015765,0,0.412773735926445,0,0,0,0,0,0,0,0,0.632671987162271,0,0.216010681643603,0.418176592028937,0.436725127492355,0.134864346384821,0,0,0,0,2.25477175473676,0,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0,1.20792060413003,0,0.316011120628178,0.405450430580328,0.308132871494482,0,0.358053391334963,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,19.7663144915973,12.4287813856938,12.0308057822273,17.0134650520251,6.16574267793578,8.3093328712867,7.42524750254986,8.10578165803597,8.15656336171568,11.39072685854,0.415149390336707,0,0.512200817262403,0.729320151204882,1.04806581313991,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0.290692833264657,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0.999242311751784,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr19:5308252..5308272,+ | |||
}} |
Latest revision as of 07:31, 4 August 2015
Short description: | p@chr19:5308252..5308272, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5308252..5308272, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.56e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.56e-22 | 23 |
neuron | 1.12e-14 | 33 |
neuronal stem cell | 1.12e-14 | 33 |
neuroblast | 1.12e-14 | 33 |
electrically signaling cell | 1.12e-14 | 33 |
ectodermal cell | 9.39e-14 | 44 |
neurectodermal cell | 9.39e-14 | 44 |
neural cell | 8.09e-13 | 43 |
electrically responsive cell | 2.15e-11 | 39 |
electrically active cell | 2.15e-11 | 39 |
neuron of cerebral cortex | 2.74e-07 | 6 |