FFCP PHASE1:Mm9::chr2:32942689..32942727,-: Difference between revisions
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{{FFCP|EntrezGene=99326|HGNC=|MCL_coexpression_id=1|UniProt=Q3V0G7|association_with_transcript=0bp_to_NM_178888,uc008jhi.1_5end|description=CAGE_peak_3_at_Garnl3_5end|id=chr2:32942689..32942727,-|ontology_enrichment_celltype=CL:0000117!2.58e-15!23;CL:0000337!2.58e-15!23;CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000393!2.03e-07!39;CL:0000211!2.03e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-20,23;CL:0000337,1.02e-20,23;CL:0000540,3.21e-13,33;CL:0000047,3.21e-13,33;CL:0000031,3.21e-13,33;CL:0000404,3.21e-13,33;CL:0000393,1.39e-10,39;CL:0000211,1.39e-10,39;CL:0002319,3.04e-09,43;CL:0000221,6.00e-09,44;CL:0000133,6.00e-09,44;CL:0002610,6.14e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.03e-28!52;UBERON:0005068!2.03e-28!52;UBERON:0006241!2.03e-28!52;UBERON:0007135!2.03e-28!52;UBERON:0000955!6.32e-27!50;UBERON:0006238!6.32e-27!50;UBERON:0001017!1.13e-26!73;UBERON:0005743!1.13e-26!73;UBERON:0002616!4.54e-26!49;UBERON:0000073!2.00e-25!75;UBERON:0001016!2.00e-25!75;UBERON:0002020!1.21e-21!34;UBERON:0003080!3.56e-21!40;UBERON:0002780!3.91e-20!39;UBERON:0001890!3.91e-20!39;UBERON:0006240!3.91e-20!39;UBERON:0000033!9.77e-20!63;UBERON:0002346!1.42e-19!71;UBERON:0003075!1.42e-19!71;UBERON:0007284!1.42e-19!71;UBERON:0002791!1.10e-17!29;UBERON:0003528!1.10e-17!29;UBERON:0001893!1.10e-17!29;UBERON:0003056!1.18e-16!49;UBERON:0004121!3.22e-16!102;UBERON:0000924!3.22e-16!102;UBERON:0006601!3.22e-16!102;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002021!3.57e-11!10;UBERON:0000411!3.57e-11!10;UBERON:0001950!3.57e-11!10;UBERON:0002619!5.49e-11!17;UBERON:0007811!6.61e-11!86;UBERON:0000153!8.98e-09!94;UBERON:0003076!1.14e-07!12;UBERON:0003057!1.14e-07!12;UBERON:0002420!2.29e-07!8;UBERON:0007245!2.29e-07!8;UBERON:0010009!2.29e-07!8;UBERON:0010011!2.29e-07!8;UBERON:0000454!2.29e-07!8;UBERON:0002298!6.98e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0001017,3.92e-37,73;UBERON:0001016,6.48e-36,75;UBERON:0001049,9.82e-36,52;UBERON:0005068,9.82e-36,52;UBERON:0006241,9.82e-36,52;UBERON:0007135,9.82e-36,52;UBERON:0002020,3.10e-30,34;UBERON:0000955,4.72e-28,47;UBERON:0006238,4.72e-28,47;UBERON:0002346,1.40e-27,64;UBERON:0003075,1.40e-27,64;UBERON:0007284,1.40e-27,64;UBERON:0002616,1.43e-26,46;UBERON:0004121,1.52e-26,95;UBERON:0000924,1.52e-26,95;UBERON:0006601,1.52e-26,95;UBERON:0010371,3.19e-23,73;UBERON:0003528,1.36e-22,29;UBERON:0002791,1.36e-22,29;UBERON:0001893,1.36e-22,29;UBERON:0002021,7.77e-22,10;UBERON:0000411,7.77e-22,10;UBERON:0001950,7.77e-22,10;UBERON:0003080,2.24e-21,40;UBERON:0002780,1.15e-19,39;UBERON:0001890,1.15e-19,39;UBERON:0006240,1.15e-19,39;UBERON:0010314,7.88e-17,92;UBERON:0003056,2.07e-16,49;UBERON:0003076,1.41e-15,12;UBERON:0003057,1.41e-15,12;UBERON:0002619,2.76e-14,17;UBERON:0000956,2.00e-13,21;UBERON:0001869,2.00e-13,21;UBERON:0000203,2.00e-13,21;UBERON:0000025,4.23e-12,114;UBERON:0002240,3.57e-11,6;UBERON:0005174,3.57e-11,6;UBERON:0001137,3.57e-11,6;UBERON:0002420,6.98e-11,8;UBERON:0007245,6.98e-11,8;UBERON:0010009,6.98e-11,8;UBERON:0010011,6.98e-11,8;UBERON:0000454,6.98e-11,8;UBERON:0004111,8.29e-11,122;UBERON:0001948,2.47e-09,5;UBERON:0002315,2.47e-09,5;UBERON:0011216,2.98e-09,194;UBERON:0002950,1.15e-08,4;UBERON:0001891,1.15e-08,4;UBERON:0009616,1.15e-08,4;UBERON:0010286,1.15e-08,4;UBERON:0004684,6.14e-07,3;UBERON:0002275,6.14e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,1.71390590642282,2.65042249141936,0.367472397644862,0.0958454710182364,0.919218786610021,5.50579404996943,4.34136949489638,4.6081959976873,1.31886287730194,1.9212405156506,1.56274011167028,5.58365998002762,1.12552522006336,2.29197371665215,2.06240009831567,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,7.02673912827713,4.81727425670947,0,0,0,0,12.7322043494099,2.74500361691176,0.753926112677186,9.03886464999838,12.0186264945255,6.64921742590592,5.67844420737152,0.203678727700633,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0.38660238396628,1.00841762311671,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,7.3843362553088,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,5.9842280745933,7.44764167471216,5.84300819968538,5.48066015816514,6.0431511791176,10.1253375034771,8.55610286126019,5.89085131679466,8.80192529978094,0,0,1.02440163452481,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.824140228955577,0,0.505394423527595,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,1.06485483695602,0.715308569841963,0.726732083161643,0.941093804153306,0.507687647350059,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0.818462086339379,0.77468420592983,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0,0,0.463735671240843|short_description=p3@Garnl3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=99326 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V0G7 | |||
|association_with_transcript=0bp_to_NM_178888,uc008jhi.1_5end | |||
|cluster_id=chr2:32942689..32942727,- | |||
|description=CAGE_peak_3_at_Garnl3_5end | |||
|id=chr2:32942689..32942727,- | |||
|ontology_enrichment_celltype=CL:0000117!2.58e-15!23;CL:0000337!2.58e-15!23;CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000393!2.03e-07!39;CL:0000211!2.03e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-20,23;CL:0000337,1.02e-20,23;CL:0000540,3.21e-13,33;CL:0000047,3.21e-13,33;CL:0000031,3.21e-13,33;CL:0000404,3.21e-13,33;CL:0000393,1.39e-10,39;CL:0000211,1.39e-10,39;CL:0002319,3.04e-09,43;CL:0000221,6.00e-09,44;CL:0000133,6.00e-09,44;CL:0002610,6.14e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.03e-28!52;UBERON:0005068!2.03e-28!52;UBERON:0006241!2.03e-28!52;UBERON:0007135!2.03e-28!52;UBERON:0000955!6.32e-27!50;UBERON:0006238!6.32e-27!50;UBERON:0001017!1.13e-26!73;UBERON:0005743!1.13e-26!73;UBERON:0002616!4.54e-26!49;UBERON:0000073!2.00e-25!75;UBERON:0001016!2.00e-25!75;UBERON:0002020!1.21e-21!34;UBERON:0003080!3.56e-21!40;UBERON:0002780!3.91e-20!39;UBERON:0001890!3.91e-20!39;UBERON:0006240!3.91e-20!39;UBERON:0000033!9.77e-20!63;UBERON:0002346!1.42e-19!71;UBERON:0003075!1.42e-19!71;UBERON:0007284!1.42e-19!71;UBERON:0002791!1.10e-17!29;UBERON:0003528!1.10e-17!29;UBERON:0001893!1.10e-17!29;UBERON:0003056!1.18e-16!49;UBERON:0004121!3.22e-16!102;UBERON:0000924!3.22e-16!102;UBERON:0006601!3.22e-16!102;UBERON:0000956!1.11e-11!21;UBERON:0001869!1.11e-11!21;UBERON:0000203!1.11e-11!21;UBERON:0002021!3.57e-11!10;UBERON:0000411!3.57e-11!10;UBERON:0001950!3.57e-11!10;UBERON:0002619!5.49e-11!17;UBERON:0007811!6.61e-11!86;UBERON:0000153!8.98e-09!94;UBERON:0003076!1.14e-07!12;UBERON:0003057!1.14e-07!12;UBERON:0002420!2.29e-07!8;UBERON:0007245!2.29e-07!8;UBERON:0010009!2.29e-07!8;UBERON:0010011!2.29e-07!8;UBERON:0000454!2.29e-07!8;UBERON:0002298!6.98e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0001017,3.92e-37,73;UBERON:0001016,6.48e-36,75;UBERON:0001049,9.82e-36,52;UBERON:0005068,9.82e-36,52;UBERON:0006241,9.82e-36,52;UBERON:0007135,9.82e-36,52;UBERON:0002020,3.10e-30,34;UBERON:0000955,4.72e-28,47;UBERON:0006238,4.72e-28,47;UBERON:0002346,1.40e-27,64;UBERON:0003075,1.40e-27,64;UBERON:0007284,1.40e-27,64;UBERON:0002616,1.43e-26,46;UBERON:0004121,1.52e-26,95;UBERON:0000924,1.52e-26,95;UBERON:0006601,1.52e-26,95;UBERON:0010371,3.19e-23,73;UBERON:0003528,1.36e-22,29;UBERON:0002791,1.36e-22,29;UBERON:0001893,1.36e-22,29;UBERON:0002021,7.77e-22,10;UBERON:0000411,7.77e-22,10;UBERON:0001950,7.77e-22,10;UBERON:0003080,2.24e-21,40;UBERON:0002780,1.15e-19,39;UBERON:0001890,1.15e-19,39;UBERON:0006240,1.15e-19,39;UBERON:0010314,7.88e-17,92;UBERON:0003056,2.07e-16,49;UBERON:0003076,1.41e-15,12;UBERON:0003057,1.41e-15,12;UBERON:0002619,2.76e-14,17;UBERON:0000956,2.00e-13,21;UBERON:0001869,2.00e-13,21;UBERON:0000203,2.00e-13,21;UBERON:0000025,4.23e-12,114;UBERON:0002240,3.57e-11,6;UBERON:0005174,3.57e-11,6;UBERON:0001137,3.57e-11,6;UBERON:0002420,6.98e-11,8;UBERON:0007245,6.98e-11,8;UBERON:0010009,6.98e-11,8;UBERON:0010011,6.98e-11,8;UBERON:0000454,6.98e-11,8;UBERON:0004111,8.29e-11,122;UBERON:0001948,2.47e-09,5;UBERON:0002315,2.47e-09,5;UBERON:0011216,2.98e-09,194;UBERON:0002950,1.15e-08,4;UBERON:0001891,1.15e-08,4;UBERON:0009616,1.15e-08,4;UBERON:0010286,1.15e-08,4;UBERON:0004684,6.14e-07,3;UBERON:0002275,6.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,1.71390590642282,2.65042249141936,0.367472397644862,0.0958454710182364,0.919218786610021,5.50579404996943,4.34136949489638,4.6081959976873,1.31886287730194,1.9212405156506,1.56274011167028,5.58365998002762,1.12552522006336,2.29197371665215,2.06240009831567,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,7.02673912827713,4.81727425670947,0,0,0,0,12.7322043494099,2.74500361691176,0.753926112677186,9.03886464999838,12.0186264945255,6.64921742590592,5.67844420737152,0.203678727700633,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0.38660238396628,1.00841762311671,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66973185934077,7.3843362553088,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,5.9842280745933,7.44764167471216,5.84300819968538,5.48066015816514,6.0431511791176,10.1253375034771,8.55610286126019,5.89085131679466,8.80192529978094,0,0,1.02440163452481,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.824140228955577,0,0.505394423527595,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,1.06485483695602,0.715308569841963,0.726732083161643,0.941093804153306,0.507687647350059,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0.818462086339379,0.77468420592983,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0,0,0.463735671240843 | |||
|short_description=p3@Garnl3 | |||
}} |
Latest revision as of 15:00, 26 September 2015
Short description: | p3@Garnl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Garnl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_178888, uc008jhi.1_5end |
EntrezGene: | Garnl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-20 | 23 |
neuron | 3.21e-13 | 33 |
neuronal stem cell | 3.21e-13 | 33 |
neuroblast | 3.21e-13 | 33 |
electrically signaling cell | 3.21e-13 | 33 |
electrically responsive cell | 1.39e-10 | 39 |
electrically active cell | 1.39e-10 | 39 |
neural cell | 3.04e-09 | 43 |
ectodermal cell | 6.00e-09 | 44 |
neurectodermal cell | 6.00e-09 | 44 |
raphe nuclei neuron | 6.14e-07 | 3 |