FFCP PHASE1:Hg19::chr8:49647808..49647873,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25678 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HAE3 | |||
|association_with_transcript=0bp_to_ENST00000433756,ENST00000521701,ENST00000521721,ENST00000523092,NM_001142857,NM_024593,NR_024605,uc003xqn.3,uc003xqo.2,uc010lxx.2,uc011ldj.1,uc011ldk.1_5end | |||
|cluster_id=chr8:49647808..49647873,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_EFCAB1_5end | |||
|id=chr8:49647808..49647873,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.49e-27!169;UBERON:0000924!2.82e-26!173;UBERON:0006601!2.82e-26!173;UBERON:0007023!1.01e-24!115;UBERON:0001049!1.87e-24!57;UBERON:0005068!1.87e-24!57;UBERON:0006241!1.87e-24!57;UBERON:0007135!1.87e-24!57;UBERON:0000073!6.41e-24!94;UBERON:0001016!6.41e-24!94;UBERON:0001017!9.95e-23!82;UBERON:0002616!1.75e-22!59;UBERON:0005743!3.08e-22!86;UBERON:0003075!8.18e-22!86;UBERON:0007284!8.18e-22!86;UBERON:0000153!1.62e-21!129;UBERON:0007811!1.62e-21!129;UBERON:0000033!3.75e-21!123;UBERON:0002346!6.33e-21!90;UBERON:0000955!3.17e-20!69;UBERON:0006238!3.17e-20!69;UBERON:0003080!5.48e-20!42;UBERON:0002780!1.24e-19!41;UBERON:0001890!1.24e-19!41;UBERON:0006240!1.24e-19!41;UBERON:0003056!1.64e-17!61;UBERON:0002020!9.19e-16!34;UBERON:0003528!9.19e-16!34;UBERON:0001893!1.31e-15!34;UBERON:0000475!1.35e-15!365;UBERON:0002791!3.80e-15!33;UBERON:0001869!2.48e-14!32;UBERON:0000468!3.32e-13!659;UBERON:0000922!9.31e-13!612;UBERON:0002619!2.06e-12!22;UBERON:0000956!6.65e-12!25;UBERON:0000203!6.65e-12!25;UBERON:0002050!1.22e-11!605;UBERON:0005423!1.22e-11!605;UBERON:0000923!2.95e-11!604;UBERON:0005291!2.95e-11!604;UBERON:0006598!2.95e-11!604;UBERON:0002532!2.95e-11!604;UBERON:0001950!4.48e-11!20;UBERON:0000467!1.52e-10!625;UBERON:0000480!2.23e-10!626;UBERON:0000481!2.45e-10!347;UBERON:0000062!4.39e-10!511;UBERON:0000064!1.24e-09!219;UBERON:0000483!9.93e-09!309;UBERON:0000119!1.15e-08!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.85e-21;41!UBERON:0001890;6.85e-21;41!UBERON:0003528;4.90e-20;34!UBERON:0002020;4.90e-20;34!UBERON:0001893;1.87e-19;34!UBERON:0002791;6.02e-19;32!UBERON:0001869;8.99e-19;32!UBERON:0000073;3.10e-18;53!UBERON:0002616;3.10e-18;53!UBERON:0002619;1.36e-17;22!UBERON:0000956;1.58e-17;25!UBERON:0000203;1.58e-17;25!UBERON:0001950;1.58e-15;20!UBERON:0000955;3.74e-12;68!UBERON:0001017;1.01e-10;75!UBERON:0001016;2.10e-10;83!UBERON:0001894;8.41e-08;7!UBERON:0007023;8.92e-08;114!UBERON:0001871;1.33e-07;6!UBERON:0002298;1.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-32,56;UBERON:0005068,1.19e-32,56;UBERON:0006241,1.19e-32,56;UBERON:0007135,1.19e-32,56;UBERON:0000073,2.50e-30,53;UBERON:0002616,2.50e-30,53;UBERON:0002780,1.11e-28,41;UBERON:0001890,1.11e-28,41;UBERON:0003080,1.11e-28,41;UBERON:0006240,1.11e-28,41;UBERON:0001016,2.54e-27,89;UBERON:0001017,5.58e-27,81;UBERON:0007023,1.86e-26,114;UBERON:0000955,1.06e-24,68;UBERON:0006238,1.06e-24,68;UBERON:0003075,2.32e-24,82;UBERON:0007284,2.32e-24,82;UBERON:0010371,4.18e-23,104;UBERON:0003528,1.11e-22,34;UBERON:0002020,1.11e-22,34;UBERON:0004121,1.63e-22,171;UBERON:0000924,1.63e-22,171;UBERON:0006601,1.63e-22,171;UBERON:0001893,1.90e-22,34;UBERON:0002346,2.23e-22,86;UBERON:0003056,6.19e-22,61;UBERON:0002791,1.22e-20,32;UBERON:0001869,1.77e-20,32;UBERON:0002619,9.18e-18,22;UBERON:0000956,1.89e-17,25;UBERON:0000203,1.89e-17,25;UBERON:0010314,5.95e-17,132;UBERON:0001950,1.07e-15,20;UBERON:0011216,3.05e-15,223;UBERON:0002050,5.21e-11,564;UBERON:0000923,1.91e-10,560;UBERON:0010316,1.91e-10,560;UBERON:0005291,1.91e-10,560;UBERON:0006598,1.91e-10,560;UBERON:0010317,1.91e-10,560;UBERON:0002532,1.91e-10,560;UBERON:0000922,3.16e-10,592;UBERON:0005423,7.01e-10,581;UBERON:0001894,8.51e-08,7;UBERON:0006222,8.51e-08,7;UBERON:0003133,1.18e-07,48;UBERON:0001871,1.26e-07,6;UBERON:0002298,2.00e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0.697801167972428,8.30077214094655,1.58260186937072,1.11389717664042,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0.738726348460727,0.204000691244253,0,1.14494394852423,0,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0.697204805222715,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0.722878304769133,2.00535164254356,1.01392563272577,0.795285947051099,0.486634870302636,0.661743720148475,0.886917589850256,0.790513071238134,11.1332214173056,0.728590576585084,2.22470665670658,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,2.61656431285521,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.490385709340376,0.151357427644931,0.576175924479999,0.234321431833797,1.24864030732128,1.1409436430889,0.896692083310806,3.28816596202542,3.0755859429945,1.82586048712923,1.02077085627447,0.245668634623536,0.929932030581889,0,0,0,0,0.505008341862199,0.625592599359821,0.554128230968366,0.877955241761676,0.30648779579902,0,0.226864366320042,0.717558542755448,0.85422955527427,0.211931901159562,0.600182192168805,0.618315175430633,1.03056216018252,0,0.506328996723799,0.194874010322397,1.7670364197088,0.0920498986422993,1.45481451136931,1.06502877754984,0.10075209822764,0,1.15956511897978,0.272746120590835,1.14721838155602,0,0.132529768321485,0.929551542956147,0.725627385107593,0.252320850875628,0.36497735907583,0,0,1.38134921352481,3.71494342425583,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,0,0,0,0,0,0,0.171567810298526,1.31700342490351,0,1.70899253099772,3.98130314181677,0.325808305310325,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0.839910640994298,1.55952606966625,1.16426079513703,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0.888970520090367,0,1.17217447210047,0,0.616964956219941,1.20137223137567,2.00078502841405,0.336393253036082,0,0.2933531432838,0.129271715757778,0,2.535908257668,0.26593811658487,0,0.514414748524284,1.41849132023278,1.3321108950805,0.285955987316295,1.08524321078289,0,1.95441710576241,0.355391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0.76228387266739,1.30139853857622,1.54657762555539,1.17261385734044,1.91381625495949,0.749007023947182,0,0,1.34960640891054,2.00068208423871,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.553107505625109,0.868836144680828,0.195801157462741,0.343143423810856,0,0,0,5.15316871458641,0,0.907170879989041,0.496215615637554,0.306923946576125,0,0.128139149255701,0,0.804269605718038,0,0.925258162815933,1.06537035187876,0.9033987161519,1.55776328755086,2.09178681227927,0,0.200506470303285,0.460404944679482,0.114814448164607,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.02580050046556,0,0,3.91555844261345,0,0,1.14853107599234,0.650060246036521,0,0.773365746336976,2.61882649094895,2.6095624703442,2.61889487720608,2.47066563197029,3.62541734785571,1.53407929348982,0.356128142586949,0.330569830721956,0.576570202095319,1.40373983744043,0.708104465988849,0,0,0.6970372701606,0,0,0,0,0.429374660225974,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.719489830333259,0.54907405947211,0.824686816419805,0.606547444719948,0,0.421258456238981,0,0,0,0.9554993798559,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0.578775534266688,3.9353685122798,0,0,0,0.430234056612155,0.491245205065606,0,3.19284957663538,0,1.31717957183961,0.379473173765715,0,1.15466535270614,1.34060455107157,0,4.23647103495506,0.86101074534246,1.68471475667626,0,1.60806380144872,0,0,0,0,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,11.7619303670895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,8.61197574414652,33.4805165288163,7.95318118213038,5.90811548924153,0,0,44.1252102987506,10.7593913655578,0.828851746593443,0,0,0,0,1.88723537409386,0,0,1.1837208676432,0,0,0.969332746095218,3.71072392647405,5.98841394003583,0,0,1.44999915086959,1.137934482855,0,0,0,0,5.90324982773194,36.3153968183674,14.471572635049,1.52581736317083,0.331737779793674,0.591095237907095,10.5304990633907,0,0,12.3120413606075,0,0.23056390438806,0,0,1.91400695839152,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.176915129006678,0.611030144933625,0,0,0,20.1529387612224,1.60515529459758,7.26219781748551,0,0,0,15.7833761139756,1.20990716048664,13.7732742733721,0.821425535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| |||
|short_description=p1@EFCAB1 | |||
}} |
Latest revision as of 10:28, 18 September 2015
Short description: | p1@EFCAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFCAB1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000433756, ENST00000521701, ENST00000521721, ENST00000523092, NM_001142857, NM_024593, NR_024605, uc003xqn.3, uc003xqo.2, uc010lxx.2, uc011ldj.1, uc011ldk.1_5end |
EntrezGene: | EFCAB1 |
HGNC: | 25678 |
UniProt: | Q9HAE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data